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Creative use of mountain biodiversity databases: The Kazbegi research agenda of GMBA-DIVERSITAS

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Geo-referenced archive databases on mountain organisms are very promising tools for achieving a better understanding of mountain biodiversity and predicting its changes. The Global Mountain Biodiversity Assessment (GMBA) of DIVERSITAS, in cooperation with the Global Biodiversity Information Facility, encourages a global effort to mine biodiversity databases on mountain organisms. The wide range of climatic conditions and topographies across the world's mountains offers an unparalleled opportunity for developing and testing biodiversity theory. The power of openly accessible, interconnected electronic databases for scientific biodiversity research, which by far exceeds the original intent of archiving for mainly taxonomic purposes, has been illustrated. There is an urgent need to increase the amount and quality of geo-referenced data on mountain biodiversity provided online, in order to meet the challenges of global change in mountains.
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Geo-referenced archive databases on
mountain organisms are very promising
tools for achieving a better understand-
ing of mountain biodiversity and pre-
dicting its changes. The Global Moun-
tain Biodiversity Assessment (GMBA) of
DIVERSITAS, in cooperation with the
Global Biodiversity Information Facility,
encourages a global effort to mine biodi-
versity databases on mountain organ-
isms. The wide range of climatic condi-
tions and topographies across the
world’s mountains offers an unparal-
leled opportunity for developing and
testing biodiversity theory. The power of
openly accessible, interconnected elec-
tronic databases for scientific biodiversi-
ty research, which by far exceeds the orig-
inal intent of archiving for mainly taxo-
nomic purposes, has been illustrated.
There is an urgent need to increase the
amount and quality of geo-referenced
data on mountain biodiversity provided
online, in order to meet the challenges of
global change in mountains.
Aims
The Global Mountain Biodiversity
Assessment (GMBA), a cross-cut-
ting network of DIVERSITAS, aims
to encourage and synthesize
research on high-altitude organis-
mic diversity, its regional and glob-
al patterns, and its causes and func-
tions (Koerner and Spehn 2002;
Spehn et al 2005). Existing and
emerging electronic databases are
among the most promising tools in
this field. Gradients of altitude and
associated climatic trends, topo-
graphic and soil peculiarities, frag-
mentation and connectivity among
biota and their varied geological
and phylogenetic history are the
major drivers and aspects of moun-
tain biodiversity, and electronic
archives provide avenues for testing
their impact on life at high eleva-
tions.
This research agenda was devel-
oped at a GMBA workshop in the
Central Caucasus in July 2006. It
capitalizes on expertise from differ-
ent fields of biology and database
experts, and was developed in coop-
eration with the Global Biodiversity
Information Facility (GBIF).
Enhancing awareness of the cen-
tral role of geo-referencing in data-
base building and use is one of the
central tasks of this agenda. Once
achieved, this permits linkage of bio-
logical information with other geo-
physical information, particularly cli-
mate data. The mountains of the
world exhibit different climatic
trends along their slopes, with only
few factors, such as the decline in
atmospheric pressure, ambient tem-
perature and clear sky radiation
changing in a common, altitude-spe-
cific way across the globe. None of
the other key components of cli-
mate, such as cloudiness and, with it,
actual solar radiation or precipita-
tion and associated soil moisture
show such global trends, and hence
are not altitude-specific. The separa-
tion of global from regional environ-
mental conditions along elevational
transects offers new perspectives for
understanding adaptation of moun-
tain biota. Similarly, information on
bedrock chemistry and mountain
topography offers test conditions for
edaphic drivers of biodiversity and
species radiation in an evolutionary
context across geographical scales.
Data-sharing for the mountain
research community
Many research projects generate
biodiversity datasets that may be rel-
evant for the wider scientific com-
munity, government and private
natural resource managers, policy-
makers, and the public. GBIF has a
mission to make the world’s primary
data on biodiversity freely and uni-
versally available via the Internet
(www.gbif.org).
The principle of open access
The UN Convention on Biological
Diversity has called for free and
open access to all past, present and
future public-good research results,
assessments, maps and databases on
biodiversity (CBD Dec. VIII/11).
Furthermore, all 47 current mem-
ber countries and 35 international
organizations in GBIF have commit-
ted themselves to “improving the
accessibility, completeness and inter-
operability of biodiversity databas-
es,” and to “promote the sharing of
biodiversity data in GBIF under a
common set of standards.” Added
value comes from sharing data
(Arzberger et al 2004a, b), but shar-
ing requires respect of author rights
and observation of certain rules as
defined by GBIF standards (Stolton
and Dudley 2004). Quite often it is
only through the linking of data
that scientific advance is achieved.
Hence protective habits are counter-
productive, given that an individual
database commonly does not con-
tain sufficient information for devel-
oping and testing theory and fur-
thering broad understanding. More-
over, many taxonomic databases rely
on the collective work of genera-
tions of scientists in a country.
Data sources and data
structure
There are 1) individual-based data
(primary occurrences, an individual
at a place at a particular time), and
2) taxon-based data (biological tax-
on characteristics such as morphol-
ogy, physiology, phylogeny, ecology,
genetics). These may refer to: a)
vouchered primary occurrences,
276
Creative Use of Mountain Biodiversity Databases: The Kazbegi Research Agenda
of GMBA-DIVERSITAS
Mountain Research and Development Vol 27 No 3 Aug 2007
277
b) observational data, or c) litera-
ture data. The quality and use of
primary species and species-occur-
rence data are highlighted in Chap-
man (2005a–c).
A full, best-practice database
entry should include the following
types of data:
Organismic data (conventional
taxonomic information);
Geo-information (coordinates,
altitude);
Habitat information (edaphic,
topographic, atmospheric);
Date and time of observation/
collection/recording;
Reference to a voucher or
archive code;
Name of collector/observer/
recorder;
Metadata provide information on
datasets, such as content, extent,
accessibility, currency, complete-
ness, accuracy, uncertainties, fit-
ness-for-purpose and suitability-
for-use and enable the use of
data by third parties without ref-
erence to the originator of the
data (Chapman 2005b).
Mountain-specific aspects
Given the significance of topogra-
phy and elevation in mountains for
local biotic conditions, reported
geographical coordinates using
GPS should at least provide a reso-
lution of seconds. Elevation should
always be obtained independently
of GPS. Chapman and Wieczorek
(2006) provide Best Practices for
Georeferencing (assigning geo-
graphic coordinates to) a range of
different location types. Should
coordinates be missing, the Bio-
Geomancer Classic online tool
(www.biogeomancer.org) may be
able to reconstruct these from
locality, region or names.
Elevation data can have the fol-
lowing structure:
Point data (for vouchers, data
loggers, climatic stations):
report as precisely as possible,
with uncertainties given. In most
cases a precision of 10 m eleva-
tion is enough, although earlier
GPS data will offer less preci-
sion.
Stratified range elevation data,
which offer entries for certain
taxa in a step by step elevational
catena (eg 100-m steps). If this is
not available, at least the eleva-
tional center of the variable/tax-
on should be provided.
Full range or amplitude data
(maximum and minimum eleva-
tion) with uncertainties. Range
data are critical for making up
lists of species for different eleva-
tional bands. The mid-point is
insufficient.
Note that such information becomes
almost useless if uncertainties in the
observation are not identified. One
way of getting around this is to
quote the data within range width
(100 m, 200 m, 1000 m). Uncertain-
ty associated with geo-referenced
localities along elevational gradients
can be measured with post-hoc 3-
dimensional geo-referencing (Rowe
2005).
Additional information (some
useful examples in a mountain
context)
Plants: Biological attributes such
as size (height), life form, flower
features, current phenology, seed
size, growth form, and other spe-
cial attributes. These data can
sometimes be obtained from tax-
onomic sources and stored in
relational databases.
Animals: Biological attributes
such as size (width, length, etc),
trophic habit, interactions (prey,
mutualistic species, host, phenol-
ogy, life stage).
Abundance or frequency meas-
ures (eg random sample of
quadrats). Information on
rareness, conservation status,
dominant associates, population
structure, if available.
Visions and suggestions for
scientific use of mountain
biodiversity e-data
The power of openly accessible,
interconnected electronic databases
for scientific biodiversity research by
far exceeds the original intent of
archiving for mainly taxonomic pur-
poses, as will be illustrated by the
following examples. Each example
starts with a scientifically important
question or hypothesis (what?) and
continues by providing a motive
(why would we want to know this?)
and suggestions about how to
approach this task by data mining
and data linking. The application of
a common mountain terminology
(a convention) is an essential prereq-
uisite for communication (Figure 1).
Mountains—a laboratory for
understanding basic questions
of evolution: How is mountain
biodiversity generated,
evolved, assembled?
What? The origin and assembly of
mountain biota have to be under-
stood in a historical context. For a
given mountain area: where did its
taxa arise, and how were taxa assem-
bled over time? How many of the
extant species resulted from the
radiation of lineages that evolved
within the area as opposed to the
radiation of lineages that were
introduced from other areas or
even continents or other ecosys-
tems? How important has long-dis-
tance dispersal been for the assem-
bly of mountain biota, and how and
when did evolutionary lineages
migrate from one mountain area to
others? What are the main sources
of long-distance dispersal events?
Has the capacity of long-distance
dispersal itself been a factor in the
rapid radiation of alpine lineages?
Why? Mountains are islands of
varying size, and thus present a
good opportunity to ask questions
about genesis of mountain biota,
the impact of competition from oth-
MountainNotes
Mountain Research and Development Vol 27 No 3 Aug 2007
278
er biota on speciation rates, and
adaptive evolution. Where arid cli-
mates have developed at lower ele-
vations, alpine areas can act as “con-
servation areas for phylogenetic lin-
eage” for lowland lineages (see
Hershkovitz et al 2006). Mountains
have acted (and will act) as refugia
for species survival during extreme
climatic events, including for
ancient phylogenetic lineages.
Rapid rates of speciation have been
documented in recent phylogenetic
studies for genera in high-elevation
areas (eg Hughes and Eastwood
2006). Rapid evolution is also a fac-
tor for predictions related to cli-
mate change.
How? Combine data from phy-
logenetic and phylogeographic
databases, regional species lists,
classification by elevation (eg selec-
tion of alpine species), geographic
distribution and species range lim-
its. Information on resilience of a
species to change (life form, life
cycle characteristics, reproduction,
and phenological data).
Are there common elevational trends
in mountain biodiversity? What
drives them?
What? The overarching issue is to
challenge the common notion that
species richness in alpine areas is
necessarily low. Life conditions
change with elevation in global but
also in very regional ways, and equal
steps in elevational climatic change
are associated with decreasing avail-
able land area per step (belt; Koer-
ner 2000). Furthermore, land sur-
face roughness (habitat diversity)
commonly increases with elevation.
Finally, mountains represent archi-
pelagos of contrasting connectivity
and island size. How is biodiversity
influenced by these 4 aspects of ele-
vation (climate, area, fragmentation
and roughness)?
Why? The wide amplitude of cli-
matic conditions and topographies
across the world’s mountains offers
an unparalleled opportunity for
developing and testing biodiversity
theory. How does species richness
in mountains change with latitude
or elevation; do reductions in
species richness on opposite-facing
slopes parallel altitudinal gradients
and/or similar temperature gradi-
ents (Figure 1)? Ratios of trends in
various taxonomic groups make it
possible to distill biotic interdepen-
dencies or at least correlative associ-
ations. Such biodiversity ratios can
serve as predictive tools. The climat-
ic relatedness of emerging trends
can assist in projections of climate
change impacts.
How? The major tool is selective
comparison of stratified biodiversity
data for various organismic groups
across elevational transects of major
mountain systems. Key problems to
be solved are the confounding
between altitude-specific (global)
and region-specific (local) climatic
trends and the geological age and
spatial extent of mountain systems.
Links with fine resolution GIS and
world climate databases are essential.
Are there typical elevational trends
in organismic traits across the
globe?
What? Across the globe we observe
the independent evolution of cer-
tain traits as elevation increases
(convergent evolution). Are these
trends and traits related to common
elevational gradients under envi-
ronmental conditions (eg tempera-
ture) or do they reflect specific cli-
matic trends that are not common
to all mountains (eg precipitation),
and would they thus also be found
at respective gradients at low eleva-
tions? Would common edaphic con-
ditions (eg presence of scree) alone
explain certain trends? Typical traits
to be explored are size and mass of
organisms, special functional types
such as the cushion plant life form,
giant rosettes or woolly plants, cer-
tain reproductive strategies, plant
breeding systems, pollinator types,
hibernation, dispersal characteris-
tics, diffusivity of egg shells, etc.
Why? Most of these traits can-
not be modified experimentally and
thus presumably reflect long-term
evolutionary selection. Many of
FIGURE 1 The GMBA concept of vertical and horizontal comparison of mountain biota.
279
these trends relate to the basic func-
tioning of plants and animals. We
need to separate taxonomic related-
ness from independent environ-
mental action. A functional inter-
pretation would require a mecha-
nistic explanation: are cushion
plants abundant at high elevations
because of loose, poorly developed
substrate, insufficient moisture,
strong wind, too low temperature,
short seasons, or certain combina-
tions of these? Is high pubescence
truly and generally more abundant
at high elevation, and if so, under
which high-elevation environmental
conditions does this trend become
enhanced?
How? The compressed width of
climatic belts in mountains offers
‘experiments by nature’ to test such
hypotheses over short geographical
distances (Koerner 2003) by com-
paring trends in traits across a suite
of mountain transects in areas of
contrasting geological/evolutionary
history and different climates. A test
across different phylogenetic
groups would reveal taxonomic
relatedness. A comparison across
different latitudes could separate
seasonality and absolute altitude
(pressure) effects because low tem-
peratures such as those at treeline
are found at 4000 m near the equa-
tor and 500 m above sea level at the
polar circle.
Are biotic links and
biodiversity ratios among
organismic groups tighter
with elevation?
What? Functional interactions
between organisms (trophic,
mechanical, physiological and path-
ogenic) drive coexistence and com-
petition among taxa. Do these ties
become looser or tighter as eleva-
tion increases? For instance, does
generalist pollination increase with
elevation? Are such links (eg mycor-
rhization, predation, facilitation)
becoming simpler (multiple vs
unique partner organisms)?
Why? Alpine areas provide a
unique opportunity for understand-
ing how coevolution developed.
Functionally, the maintenance of
species richness and mutualism is
known to be critical for maintaining
plant fitness in harsh environments.
As biodiversity of montane environ-
ments usually decreases with eleva-
tion, it may be more and more diffi-
cult to find a host for any special-
ized organism, and having a wider
range of hosts could be favorable.
Biodiversity ratios are a promising
(to be explored) tool for rapid
inventory works (the diversity of key
taxonomic groups as indicators).
How? Comparisons of altitudinal
patterns of diversity of species assem-
blages, use of known data on mutual-
istic species (eg specific pollinators,
prey, mycorrhiza), linking data for
different taxonomic groups (eg but-
terflies vs. angiosperm diversity).
Are there functional
implications of mountain
biodiversity?
What? What is the contribution of
mountain biodiversity to ecosystem
integrity, ie slope stability? What is
the functional redundancy in traits
among organisms in a given area,
what is their sensitivity to stress and
disturbance (insect outbreaks, ava-
lanches)?
Why? Ecosystem integrity on
steep mountain slopes and in high-
elevation landscapes is mainly a
question of soil stability, which in
turn depends on plant cover. The
insurance hypothesis of biodiversity
suggests that the more diversity (eg
genetic diversity, morpho-types)
there is, the less likely it is that
extreme events or natural diseases
will lead to a decline in ecosystem
functioning or a failure of vegeta-
tion to prevent soil erosion. In
steep terrain, more than anywhere
else, catchment quality is intimately
linked to ecosystem integrity. The
provision of sustainable and clean
supplies of water is the most impor-
tant and increasingly limiting
mountain resource.
How? Old vs new inventory
data, recent loss or gain of certain
plant functional types (eg trees).
Recent land cover change (remote
sensing evidence, NDVI). Apart
from information on composition
of vegetation and functional traits
of taxa (eg rooting depth, root
architecture, growth form), geo-
graphical information is needed
(geomorphology: slope, relief, soil
depth; climate, precipitation, evapo-
transpiration, extreme rain events,
snow cover duration). Comparison
of different mountain regions (eg
presence/absence of woody/non-
woody vegetation). Spatial land cov-
er information can be used to devel-
op scenarios at landscape scale.
What are the socioeconomic
impacts on mountain biodiversity?
What? Humans shape mountain veg-
etation by clearing land, grazing,
abandoning, collecting, etc, which
may increase or decrease mountain
biodiversity (Spehn et al 2005) and,
through this, affect slope processes,
erosion, water yield and inhabitabil-
ity. Are areas with traditional burn-
ing regimes, in combination with
grazing, poorer in species of flower-
ing plants, butterflies, and wild
ungulates than grazed areas in
which burning is not a tradition?
Do these trends interact with pre-
cipitation? Is high human popula-
tion density at high elevations relat-
ed to the specific loss of woody
taxa? Is the biological richness of
inaccessible microhabitats (topogra-
phy-caused ‘wilderness’) a measure
or good reference of potential bio-
diversity of adjacent, transformed
land?
Why? Of all global change
effects, land use is the predominant
driver of changes in mountain bio-
diversity. By comparing areas of his-
torically contrasting land use
regimes we can learn how these
human activities shape biota. Ratios
of wilderness biodiversity to adja-
cent managed biodiversity indicate
MountainNotes
Mountain Research and Development Vol 27 No 3 Aug 2007
the actual impact of land use. The
abundance of red list taxa or medic-
inal plants can be related to human
population pressure and land use
intensity.
How? Linking thematic databas-
es for land cover type, population
density and climate with regional
biodiversity inventories. Global
comparisons across different cli-
mates and land use histories should
permit distilling certain overarch-
ing trends. Comparison of inten-
sively used high-elevation rangeland
in regions of contrasting natural
biodiversity should illustrate the sig-
nificance of regional species pools
for biodiversity in transformed land-
scapes (eg Caucasus vs Alps). A
comparison of rangeland biodiversi-
ty in geologically young (steep)
mountain regions with that in geo-
logically old (smooth) mountain
landscapes could reveal interactive
influences of landscape roughness
and land use on biodiversity.
Effective conservation of mountain
biodiversity under global
environmental change: how best to
assess effects of current efforts and
future trends?
What? Which is the minimum altitudi-
nal range required for protected
areas in mountain regions? What are
the minimum habitat size and
requirements for long-term viable
(meta-)populations under high
mountain conditions and under
future climate change? Which are the
best diversity/area relationships in
high mountain environments for con-
servation purposes? What is the rele-
vance of connectivity through gene
flow for geographically isolated popu-
lations on high mountains? Which
are suitable indicators and the most
likely drivers of biodiversity change in
protected areas in mountains?
Why? With many global moun-
tain biodiversity hotspots increasingly
threatened, efforts are underway to
preserve these unique biota, largely
by establishing a system of protected
areas on mountains (Koerner and
Ohsawa 2005). Relevant variables for
conservation biology such as mini-
mum range, viable population size,
and connectivity become especially
critical in high mountain environ-
ments, where range sizes are general-
ly small and where populations are
often geographically isolated. In
combination with population, genet-
ic, ecological, and phylogeographic
data for species of high conservation
concern, analysis of such compara-
tive data from different mountain
ranges should provide guidelines for
critical habitat sizes and minimum
coverage of elevational ranges, with
the overall task of maximizing the
evolutionary potential through phy-
logenetic diversity and of capturing
unique elements of mountain biota
(see Box).
How? For conservation plan-
ning it will be important to inte-
grate occurrence data across multi-
ple organismic groups from differ-
ent mountain areas, which need to
be analyzed in combination with
other biotic and abiotic data using
information such as in the Global
Database of Protected Areas of
IUCN and WCMC.
Open access and a GBIF
portal to shared mountain
biodiversity data
The Global Biodiversity Information
Facility (GBIF) has already estab-
lished biodiversity information net-
works, data exchange standards, and
an information architecture that
enables interoperability and facili-
tates mining of biodiversity data.
GBIF’s technical expertise is an
essential prerequisite for this proj-
ect and we welcome the idea of cre-
ating a specific GBIF data portal on
mountain biodiversity. GMBA in
turn can help to encourage moun-
tain biodiversity researchers to share
their data within GBIF, in order to
increase the amount and quality of
geo-referenced data on mountain
biodiversity provided online. These
tasks are also in line with the imple-
mentation of the program of work
(PoW) for the Global Taxonomy Ini-
tiative (GTI) and for mountain bio-
logical diversity of the Convention
on Biological Diversity (CBD).
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ACKNOWLEDGMENTS
We gratefully acknowledge the hospitality of the
Institute of Botany, Georgian Academy of Sci-
ence (George Nakhutsrishvili, Otar Abdalaze).
Funds were provided by the Swiss National Sci-
ence Foundation (SNSF), DIVERSITAS (Paris),
and individual travel grants to participants from
their home institutions.
MountainNotes
Forests are crucial for the well-being of
humanity. They provide foundations for
life on earth through ecological func-
tions, by regulating climate and water
resources and serving as habitats for
plants and animals. Forests also furnish
a wide range of essential goods such as
wood, food, fodder and medicines, in
addition to opportunities for recreation,
spiritual renewal and other services
(FRA 2003). Forestland covers
21,188,746 ha, which corresponds to
approximately 27% of the surface area
of Turkey (OGM 2007). Forests are
among the most popular ecotourism des-
tinations because of their unique values
for tourists interested in nature in local
values and culture. It is therefore critical
to adopt a sustainable development
approach in the management of moun-
tains and forests, where biodiversity must
be conserved in the long term to mini-
mize the negative impacts of tourism.
This is increasingly being acknowledged
by governmental institutions and non-
governmental organizations in some
areas of Turkey. We report here on the
development of ecotourism and the sup-
port of local communities and other
stakeholders in the Kure Mountains,
emphasizing awareness-raising activities
and benefits to the local economy.
Ecotourism in Turkey
The Kure Mountains, located in the
provinces of Kastamonu and
Bartın—one of the largest protected
areas in Turkey with old-growth for-
est formation—have been visited by
growing numbers of tourists since
2000. There are no statistical visitor
data about the Kure Mountains, but
tourism statistics for Kastamonu
(2000–2006) give a picture of the
increasing numbers of tourists in
the region (Table 1).
It is encouraging that there are
different environmentally sensitive
Ecotourism in Old-growth Forests in Turkey: The Kure Mountains Experience
Christian Körner
Institute of Botany, Schönbeinstrasse 6,
4056 Basle, Switzerland.
gmba@unibas.ch, ch.koerner@unibas.ch
Michael Donoghue
Dept of Ecology and Evolutionary Biology,
Yale University, PO Box 208105, New Haven,
CT 06520-8106, USA.
michael.donoghue@yale.edu
Thomas Fabbro
Unit of Evolutionary Biology, Vesalgasse 1,
4001 Basle, Switzerland.
thomas.fabbro@unibas.ch
Christoph Häuser
Staatliches Museum für Naturkunde, Rosen-
stein 1, 70101 Stuttgart, Germany.
chaeuser@gmx.de
David Nogués-Bravo
Center for Macroecology, Universitetsparken
15, 2100 Copenhagen, Denmark.
DNogues@bi.ku.dk
Mary T. Kalin Arroyo
Institute of Ecology and Biodiversity (IEB),
Univ de Chile, Casilla 653, Santiago, Chile.
Contract: ICM P02-051, Chile.
southern@abello.dic.uchile.cl
Jorge Soberon
Division of Ornithology, Univ of Kansas,
1345 Jayhawk Boulevard, Dyche Hall,
Lawrence, KS 6654-7562, USA.
jsoberon@ku.edu
Larry Speers
Global Biodiversity Information Facility GBIF,
Universitetsparken 15, 2100 Copenhagen,
Denmark.
lspeers@gbif.org
Eva M. Spehn
GMBA office, Institute of Botany,
Schönbeinstrasse 6, 4056 Basel, Switzer-
land.
gmba@unibas.ch
Hang Sun
Kunming Institute of Botany, CAS, Longquan
Road 610, Heilongtan, Kunming 650204,
Yunnan, China.
hsun@mail.kib.ac.cn
Andreas Tribsch
Dept of Organismic Biology, Ecology and
Diversity of Plants, University of Salzburg,
Hellbrunnerstrasse 34, 5020 Salzburg,
Austria.
andreas.tribsch@sbg.ac.at
Piotr Tykarski
Dept of Ecology, Warsaw University, Banacha
2, 2097 Warsaw, Poland.
ptyk@biol.uw.edu.pl
Niklaus Zbinden
Swiss Ornithological Institute Sempach,
6204 Sempach, Switzerland.
niklaus.zbinden@vogelwarte.ch
doi:10.1659/mrd.0880
... Likewise, data compilations in other parts of the world have not dedicated specific efforts to the coverage or specific analysis of alpine ecosystems (but see He et al., 2006). There is therefore a need to build plant trait databases for alpine ecosystems in order to identify generic patterns of trait and functional diversity distribution along altitude gradients or to understand the functional implications of mountain biodiversity and their impacts for society (Körner et al., 2007). ...
... Functional trait databases can therefore be used to address research questions on the related dynamics of biodiversity and the functioning of alpine ecosystems (Körner, 1993;Körner et al., 2007). These regard in particular the assessment of overlaps between those traits that determine response to environmental factors (e.g., climate, soil fertility, disturbance through management regimes) and traits that determine effects on ecosystem functioning (Lavorel and Garnier, 2002). ...
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Plant functional traits are powerful tools to identify generic responses of biodiversity and ecosystem function to environmental change and to understand their underlying mechanisms. A collaborative initiative was launched to collect under a single data base information for vegetation composition, environmental variables, and plant traits of alpine ecosystems. This data base makes it possible to gather under a flexible structure data collected by naturalists, conservation managers and scientists, and to use this data to address both fundamental research and management questions. As a first test for the applicability of this data base we asked the following questions:(1) Knowing that plants show phenotypic variation for traits known as variable (e.g. height, leaf structural and chemical traits), to what extent are trait data collected under specific conditions in a given massif applicable to other alpine areas? This question is addressed by comparing trait values for a few common grassland species along a climatic gradient and across grassland management states.(2) Are there generic functional responses that can be detected using traits? This question is addressed by comparing responses of community-level traits to grassland management gradients within three different massifs.(3) Can traits be used to quantify the effects of environmental change on ecosystem services that are relevant to local stakeholders? This question is addressed by linking functional diversity to ecosystem functions associated with services identified by local stakeholders.
... Several scientific studies Lee and Chun 2016) have found that different diversity patterns relate with increasing elevation, and the majority of diversity occurs at intermediate elevations (Rahbek 2005). However, scientists still debate over the generality of patterns found due to the complexity of the observed variation in plant characteristics along elevation gradients (Körner et al. 2007). ...
... Earlier findings showed that diversity could be associated with elevation gradients in different ways, such as hump-shaped Betemariam 2011), U-shaped (Dossa et al. 2013), linearly decreasing and, even, no relationship (Pellissier et al. 2012). On the other hand, diversity would increase or decrease with increasing elevation depending on, largely, specific patterns of interactions among plant communities, species and environmental factors (Körner et al. 2007). Therefore, it is also important to consider the level of disturbances and species competition. ...
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Afromontane forests support diverse species and provide numerous ecosystem goods and services. There are few studies examining the role of dry Afromontane forests in biodiversity conservation, thus motivating our assessment of plant diversity and communities in five dry Afromontane forests. The objective of the study was to determine plant diversity and communities along environmental, harvesting and grazing gradients. Vegetation data were collected systematically in 80 quadrats (400 m 2) with subplots for shrubs and herbaceous species. Biodiversity models and multivariate analyses were employed to determine diversity and community types. Cluster and Redundancy Analyses (RDA) were employed for classification and ordination. The result showed that the forests contained 153 species belonging to 63 families of which six species were endemic. Shannon-Weiner index (H') and its effective number of species in five forests were 2.4 and 11.11, respectively. Modeling diversity and evenness exhibited a declining trend along with an increase in elevation. The harvesting index and grazing intensity correlated negatively with richness and diversity. A cluster analysis coupled with indicator species resulted in four community types. RDA showed that the cumulative variance explained by the first four axes accounted for 14.4% of the species variation. The environmental factors that contributed most to explaining species-environment variation included elevation (37.3%), total nitrogen (13.3%), soil pH (12.2%) and grazing intensity (11.8%). In conclusion, dry Afromontane forests contained considerable endemic species, diversity and community types. However, environmental factors, harvesting and grazing intensity showed significant impacts on diversity and community types. Therefore, an effective management plan is needed for the conservation of biodiversity in the forests.
... Studies have shown that temperature gradients directly influence atmospheric stability, moisture content, and the onset of precipitation events [45][46][47][48] . By integrating altitude-specific temperature data into rainfall models, researchers can enhance the accuracy of predictive models tailored to mountainous regions 49 . The analysis of rainfall patterns across different altitudinal locations (L1 to L6) in the North-Western Himalayas provided valuable insights into the spatial variability and predictive challenges associated with precipitation modeling in mountainous regions. ...
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Predicting rainfall is a challenging and critical task due to its significant impact on society. Timely and accurate predictions are essential for minimizing human and financial losses. The dependence of approximately 60% of agricultural land in India on monsoon rainfall implies the crucial nature of accurate rainfall prediction. Precise rainfall forecasts can facilitate early preparedness for disasters associated with heavy rains, enabling the public and government to take necessary precautions. In the North-Western Himalayas, where meteorological data are limited, the need for improved accuracy in traditional modeling methods for rainfall forecasting is pressing. To address this, our study proposes the application of advanced machine learning (ML) algorithms, including random forest (RF), support vector regression (SVR), artificial neural network (ANN), and k-nearest neighbour (KNN) along with various deep learning (DL) algorithms such as long short-term memory (LSTM), bi-directional LSTM, deep LSTM, gated recurrent unit (GRU), and simple recurrent neural network (RNN). These advanced techniques hold the potential to significantly improve the accuracy of rainfall prediction, offering hope for more reliable forecasts. Additionally, time series techniques, including autoregressive integrated moving average (ARIMA) and trigonometric, Box-Cox transform, arma errors, trend, and seasonal components (TBATS), are proposed for predicting rainfall across the altitudinal gradients of India’s North-Western Himalayas. This approach can potentially revolutionise how we approach rainfall forecasting, ushering in a new era of accuracy and reliability. The effectiveness and accuracy of the proposed algorithms were assessed using meteorological data obtained from six weather stations at different elevations spanning from 1980 to 2021. The results indicate that DL methods exhibit the highest accuracy in predicting rainfall, as measured by the root mean squared error (RMSE) and mean absolute error (MAE), followed by ML algorithms and time series techniques. Among the DL algorithms, the accuracy order was bi-directional LSTM, LSTM, RNN, deep LSTM, and GRU. For the ML algorithms, the accuracy order was ANN, KNN, SVR, and RF. These findings suggest that altitude significantly affects the accuracy of the models, highlighting the need for additional weather stations in this mountainous region to enhance the precision of rainfall prediction.
... Such insufficiency compromised the accuracy of forest carbon stock assessments and their variation within these complex landscapes. For example, a widely used forest biomass inventory dataset for Eurasia [10] included only 30.6% of measurements from mountain regions as defined by the Global Mountain Biodiversity Assessment (GMBA) datasets [11], and included only 19.9% of measurements which were located in rugged regions with slopes greater than 10 • . This deficiency was more pronounced across China, where only 6.45% of measurements were located in mountain regions with an elevation higher than 1000 m. ...
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Mountainous forests are pivotal in the global carbon cycle, serving as substantial reservoirs and sinks of carbon. However, generating a reliable estimate remains a considerable challenge, primarily due to the lack of representative in situ measurements and proper methods capable of addressing their complex spatial variation. Here, we proposed a deep learning-based method that combines Residual convolutional neural networks (ResNet) with in situ measurements, microwave (Sentinel-1 and VOD), and optical data (Sentinel-2 and Landsat) to estimate forest biomass and track its change over the mountainous regions. Our approach, integrating in situ measurements across representative elevations with multi-source remote sensing images, significantly improves the accuracy of biomass estimation in Tibet’s complex mountainous forests (R² = 0.80, root mean squared error = 15.8 MgC ha⁻¹). Moreover, ResNet, which addresses the vanishing gradient problem in deep neural networks by introducing skip connections, enables the extraction of complex spatial patterns from limited datasets, outperforming traditional optical-based or pixel-based methods. The mean value of forest biomass was estimated as 162.8 ± 21.3 MgC ha⁻¹, notably higher than that of forests at comparable latitudes or flat regions in China. Additionally, our findings revealed a substantial forest biomass carbon sink of 3.35 TgC year⁻¹ during 2015–2020, which is largely underestimated by previous estimates, mainly due to the underestimation of mountainous carbon stock. The significant carbon density, combined with the underestimated carbon sink in mountainous regions, emphasizes the urgent need to reassess mountain forests to better approximate the global carbon budget.
... In addition, mountain ranges support a diverse range of endemic species and plant groups due to their distinct microclimatic conditions and habitats that differ from those of their surroundings (Körner 2000). According to previous studies (Körner 2000;Körner et al. 2007), high elevation vegetation is often more diverse in terms of species per unit land area than low elevation vegetation. For a variety of taxa and landscape extents, biodiversity patterns over elevation gradients have been examined (Feng et al. 2016;Stevens 1992;Zhou et al. 2015). ...
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Mountains are biodiversity hotspots, and due to their unique microclimatic circumstances, they host a vast range of endemic species. There are two main hypotheses, the Rapoport and the mid-domain effect hypotheses, which explain how elevation and species richness are linked. The current study was conducted in the Al-Hada escarpment, which is a unique area in the world. It is located on the border of Eurasia and Africa, where there are a lot of plant species from both places. The study aimed to detect the effect of elevation on the floristic composition of the study area. The obtained results showed that the Al-Hada escarpment flora consists of 297 species belonging to 194 genera and fifty-seven distinct families. Only two families, Poaceae and Asteracae, had 22% of the whole recorded species. The obtained results showed that with increasing elevation, the numbers of species, genera, and families increased, in accordance with the Rapoport hypothesis. The numbers of families increased by 62% from the lowest elevation to the highest one, while the numbers of both species and genera increased by more than two-folds. Therophytes exhibited the maximum number, which was 44%, and Chamaephytes came in second with 25%. Phanerophytes and hemicryptophytes made up 13% and 11% of all life forms, respectively, while geophytes made up just 7%. Monoregional elements represented 33.2% of the total recorded species, where Saharo-Sindian species had the most monoregional species, accounting for around 13% of the total species. At the highest elevation, succulents accounted for 7.6% of the research area, whereas N-fixing plants accounted for 6.2%. At the highest elevation, they had the lowest value, and at the middle elevation, they had the highest value. With the rise in elevation, the neotropical, endemic, and Mediterranean elements rose. Succulents and N-fixing species did not show a clear relationship with the elevation but exhibited the lowest value at the highest elevation, and vice versa. Therophytes and geophytes increased while the number of hemicryptophytes decreased with elevation. Surprisingly, phanerophytes did not show any relationship with elevation, while, with the rise in elevation, the pan-tropical, endemic, and Mediterranean elements rose. Neotropical and Saharo-Sindian elements decreased with the rise in elevation. Considering our results, we can conclude that the relationship of taxa diversity with the different altitude of the arid subtropical regions' mountains, whose elevation does not exceed 2000 m Effect of elevation on floristic diversity, life forms and chorotypes in the Al-Hada mountain escarpment, Saudi Arabia Citation: Fadl MA, Al-Yasi HM, Alsherif EA (2022) Effect of elevation on floristic diversity, life forms and chorotypes in the Al-Hada mountain escarpment, Saudi Arabia. Journal of Mountain Science 19
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Background Carabid beetles are one of the several taxa useful as model organisms to study and monitor current ecosystems features, as well as environmental changes caused by global changes. Open data about these organisms are scarcely available. To fill this gap, a data table (Darwin Core formatted) was uploaded in GBIF database (https://doi.org/10.15468/rzmp6n). The dataset is the result of a pitfall trapping survey of carabid beetles living along an altitudinal bioclimatic gradient, in the Dolomites mountains within the protected area of the Regional Park "Paneveggio e Pale di S. Martino" (Trento, Italy). Investigated environments ranged from spruce forests to the extreme environments of high altitude, so to collect a dataset as complete as possible on carabid beetles harboured in this area. New information The dataset included here is part of an initiative aimed at promoting the adoption of a formal structure for datasets on carabid beetles acquired by field surveys and to give open access to these data. This dataset gives the opportunity to test the effects of global change affecting the same area, within long-term surveys on carabid beetles. Furthermore, the availability of open data is intended to promote an ethical approach to ecological research under a social and scientific point of view, the first because it will avoid wasting public funds on repeating the same researches and the second because it will avoid recapturing new organisms in the same (or similar) environments by other researchers.
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The present study was carried out to analyze the effect of Mughal road on dynamics of land use/land cover using geospatial techniques of remote sensing and GIS on Sukh Saria- a catchment area of Rambiara Nallah in Hirpora of Shopian Distract, Kashmir. During the 20 years time period, an unprecedented decrease in dense forest area has caused a key land use change which has occurred due to construction of the famous Mughal road. This has led to increasing emissions of CO2 into the atmosphere which in turn leads to climate change. However, the challenges of climate change can be effectively overcome by terrestrial carbon sequestration. Keywords: Land use, land cover, remote sensing, catchment, carbon sequestration
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Natural diversity and wilderness of the Tatra Mts. has been fascinating people since a long time ago and the history of its scientific research dates for the beginning of the 19th century. The Tatran fauna and flora undergo changes caused by human impact and natural processes, which is clearly visible in the last two centuries. Assessments of natural dynamics and processes utilize usually single facts from different periods. A more complete view is possible to achieve through analysis of large sets of accumulated data. Pooling data enhances also studies on vertical distribution of species in complex montane environments. Despite many years of research, this knowledge is fragmentary, especially on invertebrates. „Biodiversity Map” is a scientific project of the Polish Biological Information Network (KSIB), aimed to integrate data on distribution of species and to link them with spatial information. The collected information was acquired from various primary sources, e.g. observations, specimen collections, and bibliography. Each record contains data on species taxonomy, location and time of the collection event, accompanied by metadata (data source and other record descriptors). Many records hold information on elevation a.s.l. of the record collection. It is possible to acquire this attribute secondarily, based on the location. This is especially important in case of montane species. A browser of the „Biodiversity Map” (baza.biomap.pl) provides search tools using a number of criteria that can be based on every component of a record. A GIS module of the website (gis.biomap.pl) enables a user to make spatial queries to the database and to visualize the results. The system is being gradually enhanced. At the moment it contains data on insects though it is possible for it to cover also other taxa. We present a model application of the „Biodiversity Map” for beetles (Coleoptera) of the Tatra Mts. The system can be a useful tool for studies of Tatran biological diversity. It gives opportunities for application of scientific data for conservation and natural resources management purposes. Keywords: beetles, Coleoptera, GIS, Tatra Mts., database, biodiversity
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Streszczenie Przyroda Tatr interesuje ludzi od dawna, a historia jej badań naukowych sięga początku XIX w. Na skutek antro-popresji oraz naturalnych procesów następują przemiany fauny i flory tatrzańskiej, co jest szczególnie widoczne w ostatnich dwóch stuleciach. Naturalną dynamikę przyro-dy zwykle szacuje się na podstawie wyrywkowych danych z różnych okresów. Bardziej kompletny obraz można otrzy-mać dopiero dzięki analizie dużej ilości nagromadzonych danych. Analogicznie akumulacja danych sprzyja bada-niom rozmieszczenia gatunków w gradiencie wysokości zróżnicowanego środowiska gór. Pomimo wielu lat badań wiedza w tym zakresie nadal jest niepełna, zwłaszcza w od-niesieniu do bezkręgowców. " Mapa Bioróżnorodności " to projekt naukowy Krajowej Sieci Informacji o Bioróżnorod-ności, którego celem jest integracja danych dotyczących rozmieszczenia gatunków i powiązanie ich z systemem in-formacji przestrzennej. Zgromadzone informacje pocho dzą z różnych źródeł o charakterze pierwotnym, np. z obser-wacji własnych, kolekcji materiałów dowodowych i biblio-grafii. Każdy rekord zawiera dane o taksonomii gatunku, jego lokalizacji, czasie stwierdzenia oraz metadane (źródło i dodatkowe elementy opisujące rekord). Liczne rekordy zawierają także informacje o wysokości n.p.m., gdzie dany gatunek został zanotowany, a dla wielu pozostałych można je uzyskać wtórnie – na podstawie danych o lokalizacji, co jest szczególnie istotne w przypadku gatunków górskich. Aplikacja dostępowa do bazy " Mapy Bioróżnorodności " (baza.biomap.pl) umożliwia wyszukiwanie danych o roz-mieszczeniu gatunków na podstawie szeregu kryteriów opartych na wszystkich składowych rekordu, a moduł GIS (gis.biomap.pl) rozszerza te możliwości o odpytywanie ba zy i wizualizację danych poprzez mapę. System ten wciąż się rozwija. Na obecnym etapie zawiera dane o owadach, ale można nim objąć również inne grupy organizmów. W ni-niejszym opracowaniu przedstawiamy modelowe zastoso-wanie systemu na przykładzie chrząszczy (Coleoptera) ta-trzańskich. " Mapa Bioróżnorodności " jest przydatnym narzędziem do poznania różnorodności biologicznej Tatr. Otwiera też perspektywę aplikacyjnego wykorzystania da-nych naukowych w celach ochrony i zarządzania zasobami przyrody tatrzańskiej. Abstract Natural diversity and wilderness of the Tatra Mts. has been fascinating people since a long time ago and the history of its scientific research dates for the beginning of the 19th century. The Tatran fauna and flora undergo changes caused by human impact and natural processes, which is clearly visible in the last two centuries. Assessments of natural dynamics and processes utilize usually single facts from different periods. A more complete view is possible to achieve through analysis of large sets of accumulated data. Pooling data enhances also studies on vertical distribution of species in complex montane environments. Despite many years of research, this knowledge is fragmentary, especially on invertebrates. " Biodiversity Map " is a scientific project of the Polish Biological Information Network (KSIB), aimed to integrate data on distribution of species and to link them with spatial information. The collected information was acquired from various primary sources, e.g. observations , specimen collections, and bibliography. Each record contains data on species taxonomy, location and time of the collection event, accompanied by metadata (data source and other record descriptors). Many records hold information on elevation a.s.l. of the record collection. It is possible to acquire this attribute secondarily, based on the
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Access to and sharing of data are essential for the conduct and advancement of science. This article argues that publicly funded research data should be openly available to the maximum extent possible. To seize upon advancements of cyberinfrastructure and the explosion of data in a range of scientific disciplines, this access to and sharing of publicly funded data must be advanced within an international framework, beyond technological solutions. The authors, members of an OECD Follow-up Group, present their research findings, based closely ontheir report to OECD, on key issues in data access, as well as operating principles and management aspects necessary to successful data access regimes.
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Penalized likelihood analysis of previously published chloroplast DNA (cpDNA) ndhF sequences suggests that the central-southern Andean genus Chaetanthera diverged ca. 16.5 million years (my) ago, well before the uplift of the Andes to their present heights. Penalized likelihood analysis based on new nuclear ribosomal DNA (rDNA) internal transcribed spacer (ITS) sequences indicates that the most relictual lineages occupy high elevation Andean habitats that did not exist until some 10 my later. This result is contrary to the expectation that younger habitats should be occupied by phylogenetically younger lineages. The results are interpreted with respect to the development of aridity in lowland habitats during the Miocene and Pliocene, which presumably extinguished the lowland relatives of the high elevation taxa or, in effect, forced them upwards in search of adequate moisture. As the more northerly lineages were being displaced upward, others diversified in the mediterranean-type climate area of central Chile, giving rise to additional high elevation taxa again, at an early date, as well as lowland taxa. Some species of Chaetanthera from lowland central Chile appear as the phylogenetically youngest taxa, suggesting secondary adaptation to lowland aridity. At the same time, at least two high elevation species, Chaetanthera perliviana and Chaetanthera perpusilla, appear to have been derived recently from a lower elevation ancestor, while some middle to low elevation taxa seem to have evolved recently out of a high elevation complex. The results suggest that the younger high elevation habitats have served as both "cradle" and "museum" for Chaetanthera lineages. (c) 2006 Elsevier Inc. All rights reserved.
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The emergence of an global cyberinfrastructure is rapidly increasing the ability of scientists to produce, manage, and use data, leading to new understanding and modes of scientific inquiry that depend on broader data access. As research becomes increasingly global, data intensive, and multifaceted, it is imperative to address national and international data access and sharing issues systematically in a policy arena that transcends national jurisdictions. The authors of this Policy Forum summarize key findings of an international group that studied these issues on behalf of the OECD, and argue that an international framework of principles and guidelines for data access is needed to better realize this potential. They provide a framework for locating and analyzing where improvements can be made in data access regimes, and highlight several topics that require further examination to better inform future policies.
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GBIF has been concerned about the unprotected distribution of sensitive primary species occurrence data (for example the exact localities of rare, endangered or commercially valuable taxa) since its launch. This document reviews current approaches for obscuring or generalising such data, with a set of recommendations to guide data holders to develop their own policies.
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Aim The value of biodiversity informatics rests upon the capacity to assess data quality. Yet as these methods have developed, investigating the quality of the underlying specimen data has largely been neglected. Using an exceptionally large, densely sampled specimen data set for non‐flying small mammals of Utah, I evaluate measures of uncertainty associated with georeferenced localities and illustrate the implications of uncritical incorporation of data in the analysis of patterns of species richness and species range overlap along elevational gradients. Location Utah, USA, with emphasis on the Uinta Mountains. Methods Employing georeferenced specimen data from the Mammal Networked Information System (MaNIS), I converted estimates of areal uncertainty into elevational uncertainty using a geographic information system (GIS). Examining patterns in both areal and elevational uncertainty measures, I develop criteria for including localities in analyses along elevational gradients. Using the Uinta Mountains as a test case, I then examine patterns in species richness and species range overlap along an elevational gradient, with and without accounting for data quality. Results Using a GIS, I provide a framework for post‐hoc 3‐dimensional georeferencing and demonstrate collector‐recorded elevations as a valuable technique for detecting potential errors in georeferencing. The criteria established for evaluating data quality when analysing patterns of species richness and species range overlap in the Uinta Mountains test case reduced the number of localities by 44% and the number of associated specimens by 22%. Decreasing the sample size in this manner resulted in the subsequent removal of one species from the analysis. With and without accounting for data quality, the pattern of species richness along the elevational gradient was hump‐shaped with a peak in richness at about mid‐elevation, between 2300 and 2600 m. In contrast, the frequencies of different pair‐wise patterns of elevational range overlap among species differed significantly when data quality was and was not accounted for. Main conclusions These results indicate that failing to assess spatial error in data quality did not alter the shape of the observed pattern in species richness along the elevational gradient nor the pattern of species’ first and last elevational occurrences. However, it did yield misleading estimates of species richness and community composition within a given elevational interval, as well as patterns of elevational range overlap among species. Patterns of range overlap among species are often used to infer processes underlying species distributions, suggesting that failure to account for data quality may alter interpretations of process as well as perceived patterns of distribution. These results illustrate that evaluating the quality of the underlying specimen data is a necessary component of analyses incorporating biodiversity informatics.