Zeyun Yu

Zeyun Yu
  • Ph.D.
  • Professor (Associate) at University of Wisconsin–Milwaukee

About

158
Publications
35,452
Reads
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3,973
Citations
Current institution
University of Wisconsin–Milwaukee
Current position
  • Professor (Associate)

Publications

Publications (158)
Preprint
Full-text available
Identifying individual tissues, so-called tissue segmentation, in diabetic foot ulcer (DFU) images is a challenging task and little work has been published, largely due to the limited availability of a clinical image dataset. To address this gap, we have created a DFUTissue dataset for the research community to evaluate wound tissue segmentation al...
Article
Full-text available
The global burden of acute and chronic wounds presents a compelling case for enhancing wound classification methods, a vital step in diagnosing and determining optimal treatments. Recognizing this need, we introduce an innovative multi-modal network based on a deep convolutional neural network for categorizing wounds into four categories: diabetic,...
Article
Full-text available
Wound care professionals provide proper diagnosis and treatment with heavy reliance on images and image documentation. Segmentation of wound boundaries in images is a key component of the care and diagnosis protocol since it is important to estimate the area of the wound and provide quantitative measurement for the treatment. Unfortunately, this pr...
Preprint
Full-text available
The global burden of acute and chronic wounds presents a compelling case for enhancing wound classification methods, a vital step in diagnosing and determining optimal treatments. Recognizing this need, we introduce an innovative multi-modal network based on a deep convolutional neural network for categorizing wounds into four categories: diabetic,...
Preprint
Full-text available
The global burden of acute and chronic wounds presents a compelling case for enhancing wound classification methods, a vital step in diagnosing and determining optimal treatments. Recognizing this need, we introduce an innovative multi-modal network based on a deep convolutional neural network for categorizing wounds into four categories: diabetic,...
Preprint
Full-text available
This paper presents FUSegNet, a new model for foot ulcer segmentation in diabetes patients, which uses the pre-trained EfficientNet-b7 as a backbone to address the issue of limited training samples. A modified spatial and channel squeeze-and-excitation (scSE) module called parallel scSE or P-scSE is proposed that combines additive and max-out scSE....
Preprint
Full-text available
Cancer is a leading cause of death in many countries. An early diagnosis of cancer based on biomedical imaging ensures effective treatment and a better prognosis. However, biomedical imaging presents challenges to both clinical institutions and researchers. Physiological anomalies are often characterized by slight abnormalities in individual cells...
Preprint
Full-text available
The number of international benchmarking competitions is steadily increasing in various fields of machine learning (ML) research and practice. So far, however, little is known about the common practice as well as bottlenecks faced by the community in tackling the research questions posed. To shed light on the status quo of algorithm development in...
Article
Full-text available
Wound classification is an essential step of wound diagnosis. An efficient classifier can assist wound specialists in classifying wound types with less financial and time costs and help them decide on an optimal treatment procedure. This study developed a deep neural network-based multi-modal classifier using wound images and their corresponding lo...
Article
Full-text available
As a raw material for beer, barley seeds play a critical role in producing beers with various flavors. Unexcepted mixed varieties of barley seeds make malt quality uncontrollable and can even destroy beer flavors. To ensure the quality and flavor of malts and beers, beer brewers will strictly check the appropriate varieties of barley seeds during t...
Preprint
Full-text available
The classification of wound severity is a critical step in wound diagnosis. An effective classifier can help wound professionals categorize wound conditions more quickly and affordably, allowing them to choose the best treatment option. This study used wound photos to construct a deep neural network-based wound severity classifier that classified t...
Preprint
Full-text available
Precision tooth segmentation is crucial in the oral sector because it provides location information for orthodontic therapy, clinical diagnosis, and surgical treatments. In this paper, we investigate residual, recurrent, and attention networks to segment teeth from panoramic dental images. Based on our findings, we suggest three single-stage models...
Preprint
Full-text available
Skin and soft tissue infections (SSTIs) are among the most frequently observed diseases in ambulatory and hospital settings. Resistance of diverse bacterial pathogens to antibiotics is a significant cause of severe SSTIs, and treatment failure results in morbidity, mortality, and increased cost of hospitalization. Therefore, antimicrobial surveilla...
Preprint
Full-text available
Acute and chronic wounds with varying etiologies burden the healthcare systems economically. The advanced wound care market is estimated to reach $22 billion by 2024. Wound care professionals provide proper diagnosis and treatment with heavy reliance on images and image documentation. Segmentation of wound boundaries in images is a key component of...
Article
Full-text available
We present an automated wound localizer from 2D wound and ulcer images using a deep neural network as the first step towards building an automatic and complete wound diagnostic system. The wound localizer is developed using the YOLOv3 model, which is then turned into an iOS mobile application. The developed localizer can detect the wound and its su...
Article
Wound prognostic models not only provide an estimate of wound healing time to motivate patients to follow up their treatments but also can help clinicians to decide whether to use a standard care or adjuvant therapies and to assist them with designing clinical trials. However, collecting prognosis factors from Electronic Medical Records (EMR) of pa...
Preprint
Full-text available
There is an increasing demand in medical industries to have automated systems for detection and localization which are manually inefficient otherwise. In dentistry, it bears great interest to trace the pathway of mandibular canals accurately. Proper localization of the position of the mandibular canals, which surrounds the inferior alveolar nerve (...
Article
Full-text available
Stream gages are critically important for measuring stream flow in water resources management. Stream gages monitor and record flow and water stage within some water body. The United States Geological Survey maintains a network of stream gages across the country. Many of these sites are also equipped with webcams to gather real‐time river informati...
Article
Cancers are the leading cause of death in many countries. Early diagnosis plays a crucial role in having proper treatment for this debilitating disease. The automated classification of the type of cancer is a challenging task since pathologists must examine a huge number of histopathological images to detect infinitesimal abnormalities. In this stu...
Article
Significance: Accurately predicting wound healing trajectories is difficult for wound care clinicians due to the complex and dynamic processes involved in wound healing. Wound care teams capture images of wounds during clinical visits generating big data sets over time. Developing novel artificial intelligence (AI) systems can help clinicians diag...
Article
The quality of barley seeds determines the quality and flavor aspects of malts and beers, and the purity of barley seeds is one of the primary considerations in the malting process. Visual discrimination between barley varieties is difficult and requires a barley specialist with intensive experience and years of training. Therefore, computational a...
Preprint
Wound classification is an essential step of wound diagnosis. An efficient classifier can assist wound specialists in classifying wound types with less financial and time costs and help them decide an optimal treatment procedure. This study developed a deep neural network-based multi-modal classifier using wound images and their corresponding locat...
Article
Work zone safety management and research relies heavily on the quality of work zone crash data. However, it is possible that a police officer may misclassify a crash in structured data due to: restrictive options in the crash report; a lack of understanding about their importance; lack of time due to police officers’ work load; and ignorance of wor...
Article
In the U.S. 5–10% of new pediatric cases of cancer are primary bone tumors. The most common type of primary malignant bone tumor is osteosarcoma. The intention of the present work is to improve the detection and diagnosis of osteosarcoma using computer-aided detection (CAD) and diagnosis (CADx). Such tools as convolutional neural networks (CNNs) ca...
Article
Acute and chronic wounds are a challenge to healthcare systems around the world and affect many people’s lives annually. Wound classification is a key step in wound diagnosis that would help clinicians to identify an optimal treatment procedure. Hence, having a high-performance classifier assists wound specialists to classify wound types with less...
Preprint
Full-text available
Wound prognostic models not only provide an estimate of wound healing time to motivate patients to follow up their treatments but also can help clinicians to decide whether to use a standard care or adjuvant therapies and to assist them with designing clinical trials. However, collecting prognosis factors from Electronic Medical Records (EMR) of pa...
Preprint
Millions of people are affected by acute and chronic wounds yearly across the world. Continuous wound monitoring is important for wound specialists to allow more accurate diagnosis and optimization of management protocols. Machine Learning-based classification approaches provide optimal care strategies resulting in more reliable outcomes, cost savi...
Article
Full-text available
Acute and chronic wounds have varying etiologies and are an economic burden to healthcare systems around the world. The advanced wound care market is expected to exceed $22 billion by 2024. Wound care professionals rely heavily on images and image documentation for proper diagnosis and treatment. Unfortunately lack of expertise can lead to improper...
Preprint
Full-text available
In the U.S, 5-10\% of new pediatric cases of cancer are primary bone tumors. The most common type of primary malignant bone tumor is osteosarcoma. The intention of the present work is to improve the detection and diagnosis of osteosarcoma using computer-aided detection (CAD) and diagnosis (CADx). Such tools as convolutional neural networks (CNNs) c...
Preprint
Cancers are the leading cause of death in many developed countries. Early diagnosis plays a crucial role in having proper treatment for this debilitating disease. The automated classification of the type of cancer is a challenging task since pathologists must examine a huge number of histopathological images to detect infinitesimal abnormalities. I...
Preprint
Acute and chronic wounds are a challenge to healthcare systems around the world and affect many people's lives annually. Wound classification is a key step in wound diagnosis that would help clinicians to identify an optimal treatment procedure. Hence, having a high-performance classifier assists the specialists in the field to classify the wounds...
Preprint
Acute and chronic wounds have varying etiologies and are an economic burden to healthcare systems around the world. The advanced wound care market is expected to exceed $22 billion by 2024. Wound care professionals rely heavily on images and image documentation for proper diagnosis and treatment. Unfortunately lack of expertise can lead to improper...
Preprint
Full-text available
Intervertebral discs (IVDs), as small joints lying between adjacent vertebrae, have played an important role in pressure buffering and tissue protection. The fully-automatic localization and segmentation of IVDs have been discussed in the literature for many years since they are crucial to spine disease diagnosis and provide quantitative parameters...
Preprint
Full-text available
We present an automated wound localizer from 2D wound and ulcer images by using deep neural network, as the first step towards building an automated and complete wound diagnostic system. The wound localizer has been developed by using YOLOv3 model, which is then turned into an iOS mobile application. The developed localizer can detect the wound and...
Preprint
Full-text available
Efficient and effective assessment of acute and chronic wounds can help wound care teams in clinical practice to greatly improve wound diagnosis, optimize treatment plans, ease the workload and achieve health related quality of life to the patient population. While artificial intelligence (AI) has found wide applications in health-related sciences...
Article
Multiple layers of information security are introduced based on computational ghost imaging (CGI). We show, in the first step, that it is possible to design a very reliable image encryption scheme using 3D computational ghost imaging with two single-pixel detectors sending their data through two channels. It is then shown that further level of secu...
Article
Full-text available
With the rapid expansion of applied 3D computational vision, shape descriptors have become increasingly important for a wide variety of applications and objects from molecules to planets. Appropriate shape descriptors are critical for accurate (and efficient) shape retrieval and 3D model classification. Several spectral-based shape descriptors have...
Conference Paper
Intervertebral discs (IVDs), as small joints lying between adjacent vertebrae, have played an important role in pressure buffering and tissue protection. The fully-automatic localization and segmentation of IVDs have been discussed in the literature for many years since they are crucial to spine disease diagnosis and provide quantitative parameters...
Article
Full-text available
Tissue repairing has been the ultimate goal of surgery, especially with the emergence of reconstructive medicine. A large amount of research devoted to exploring innovative porous scaffold designs, including homogeneous and inhomogeneous ones, have been presented in the literature. The triply periodic minimal surface has been a versatile source of...
Preprint
Full-text available
With the rapid expansion of applied 3D computational vision, shape descriptors have become increasingly important for a wide variety of applications and objects from molecules to planets. Appropriate shape descriptors are critical for accurate (and efficient) shape retrieval and 3D model classification. Several spectral-based shape descriptors have...
Article
Full-text available
Multi-modal image registration is the primary step in integrating information stored in two or more images, which are captured using multiple imaging modalities. In addition to intensity variations and structural differences between images, they may have partial or full overlap, which adds an extra hurdle to the success of registration process. In...
Chapter
The rapid development of additive manufacturing in last decades has greatly improved the quality of medical implants and widened its applications in tissue engineering. For the purpose of creating realistic porous scaffolds, a series of diverse methodologies are attempted to help simplify the manufacturing process and to improve the scaffold qualit...
Chapter
Blindness or vision impairment, one of the top ten disabilities among men and women, targets more than 7 million Americans of all ages. Accessible visual information is of paramount importance to improve independence and safety of blind and visually impaired people, and there is a pressing need to develop smart automated systems to assist their nav...
Article
Full-text available
Recent advances in scanning device technologies and improvements in techniques that generate and synthesize 3D shapes have made 3D models widespread in various fields including medical research, biology, engineering, etc. 3D shape descriptors play a fundamental role in many 3D shape analysis tasks such as point matching, establishing point‐to‐point...
Conference Paper
Porous structures had traditionally been generated using triply periodic minimal surfaces (TPMS), which however often encounter problems with the continuity and integrality of the generated curved surfaces when applying to irregular models. The present work describes a new porous-structure designing method using a combination of parameterized hexah...
Article
This work is to address the limitations of 2D Scanning Electron Microscopy (SEM) micrographs in providing 3D topographical information necessary for various types of analysis in biological and biomedical sciences as well as mechanical and material engineering by investigating modern stereo vision methodologies for 3D surface reconstruction of micro...
Article
Full-text available
Scanning Electron Microscope (SEM) as one of the major research and industrial equipment for imaging of micro-scale samples and surfaces has gained extensive attention from its emerge. However, the acquired micrographs still remain two-dimensional (2D). In the current work a novel and highly accurate approach is proposed to recover the hidden third...
Article
Scanning Electron Microscopy (SEM) imaging has been a principal component of many studies in biomedical, mechanical, and materials sciences since its emergence. Despite the high resolution of captured images, they remain two-dimensional (2D). In this work, a novel framework using sparse-dense correspondence is introduced and investigated for 3D rec...
Article
Full-text available
Estimating the displacements of intensity patterns between sequential frames is a very well-studied problem, which is usually referred to as optical flow estimation. The first assumption among many of the methods in the field is the brightness constancy during movements of pixels between frames. This assumption is proven to be not true in general,...
Article
In this paper, we review state-of-the-art techniques to correct eye motion artifacts in Optical Coherence Tomography (OCT) imaging. The methods for eye motion artifact reduction can be categorized into two major classes: 1) hardware-based techniques and 2) software-based techniques. In the first class, additional hardware is mounted onto the OCT sc...
Conference Paper
Optical character recognition (OCR) as a classic machine learning challenge has been a longstanding topic in a variety of applications in healthcare, education, insurance, and legal industries to convert different types of electronic documents, such as scanned documents, digital images, and PDF files into fully editable and searchable text data. Th...
Article
Development of additive manufacturing in last decade greatly improves tissue engineering. During the manufacturing of porous scaffold, simplified but functionally equivalent models are getting focused for practically reasons. Scaffolds can be classified into regular porous scaffolds and irregular porous scaffolds. Several methodologies are develope...
Article
Image feature detector and descriptor algorithms have made a big advance in almost every area of computer vision applications including object localisation, object tracking, mobile robot mapping, watermarking, panorama stitching and 3D surface reconstruction by assisting the detection and description of feature points in a set of given images. In t...
Article
Tribology as a branch of materials and mechanical engineering sciences incorporates concepts of friction, wear, and lubrication to discover knowledge and facts about different surfaces. The scanning electron microscope (SEM) and the optical microscope (OM) are two common imaging equipment that have been used in tribological research to visualize an...
Article
Structural analysis of microscopic objects is a longstanding topic in several scientific disciplines, such as biological, mechanical, and materials sciences. The scanning electron microscope (SEM), as a promising imaging equipment has been around for decades to determine the surface properties (e.g., compositions or geometries) of specimens by achi...
Article
Full-text available
Novel approaches for generating and comparing flexible (non-rigid) molecular surface meshes are developed. The mesh-generating method is fast and memory-efficient. The resulting meshes are smooth and accurate, and possess high mesh quality. An isometric-invariant shape descriptor based on the Laplace- Beltrami operator is then explored for mesh com...
Conference Paper
Image feature detectors and descriptors have made a big advance in several computer vision applications including object recognition, image registration, remote sensing, panorama stitching, and 3D surface reconstruction. Most of these fundamental algorithms are complicated in code, and their implementations are available for only a few platforms. T...
Conference Paper
In this paper, the use of three dense descriptors, namely Schmid, Gabor and steerable descriptors, is introduced and investigated for optical flow estimation and dense correspondence of different scenes and compared with the well-known dense SIFT/SIFTFlow. Several examples of optical flow estimation and dense correspondence across scenes with high...
Article
Full-text available
The Scanning Electron Microscope (SEM) as a 2D imaging instrument has been widely used in many scientific disciplines including biological, mechanical, and materials sciences to determine the surface attributes of microscopic objects. However the SEM micrographs still remain 2D images. To effectively measure and visualize the surface properties, we...
Article
Full-text available
The Poisson-Boltzmann equation (PBE) is one important implicit solvent continuum model for calculating electrostatics of protein in ionic solvent. We recently developed a PBE solver library, called SDPBS, that incorporates the finite element, finite difference, solution decomposition, domain decomposition, and multigrid methods. To make SDPBS more...
Article
Optical coherence tomography (OCT) is an emerging imaging modality that has been widely used in the field of biomedical imaging. In the recent past, it has found uses as a diagnostic tool in dermatology, cardiology, and ophthalmology. In this paper we focus on its applications in the field of ophthalmology and retinal imaging. OCT is able to non-in...
Article
The scanning electron microscope (SEM), as one of the most commonly used instruments in biology and material sciences, employs electrons instead of light to determine the surface properties of specimens. However, the SEM micrographs still remain 2D images. To effectively measure and visualize the surface attributes, we need to restore the 3D shape...
Conference Paper
Full-text available
There have been very much interests in extracting image feature points in almost every computer vision application. The Scale Invariant Feature Transform (SIFT) is probably the most popular and widely applied feature detector which assists a variety of applications including object recognition, image registration, object localization, image forgery...
Article
Full-text available
Image features detection and description is a longstanding topic in computer vision and pattern recognition areas. The Scale Invariant Feature Transform (SIFT) is probably the most popular and widely demanded feature descriptor which facilitates a variety of computer vision applications such as image registration, object tracking, image forgery det...
Article
Feature-preserving image interpolation is an active area in image processing field. In this paper we propose a new edge directed image super-resolution algorithm based on structure tensors. Using an isotropic Gaussian filter, the structure tensor at each pixel of an image is computed. Based on the tangent eigenvector of the structure tensor, the ed...
Conference Paper
In this paper a fast triangular mesh based registration method is proposed. Having Template and Reference images as inputs, the template image is triangulated using a content adaptive mesh generation algorithm. Considering the pixel values at mesh nodes, interpolated using spline interpolation method for both of the images, the energy functional ne...
Conference Paper
The Scanning Electron Microscope (SEM) as 2D imaging equipment has been widely used in biology and material sciences to determine the surface attributes of a microscopic object. Having 3D surfaces from SEM images would provide true anatomic shapes of micro samples which allow for quantitative measurements and informative visualization of the system...
Article
Optical Coherence Tomography (OCT) in an emerging technique in the field of biomedical imaging, with applications in ophthalmology, dermatology, coronary imaging etc. Due to the underlying physics, OCT images usually suffer from a granular pattern, called speckle noise, which restricts the process of interpretation. Here, a sparse and low rank deco...
Article
We present a novel line drawing approach for 3D models by introducing their skeleton information into the rendering process. Based on the silhouettes of the input,3D models, we first extract feature lines in geometric regions by utilizing their curvature, torsion and view-dependent information. Then, the skeletons of the models are extracted by our...
Conference Paper
The triangulation of images has become an active research area in recent years for its compressive representation and ease of image processing and visualization. However, little work has been done on how to faithfully recover image intensities from a triangulated mesh of an image, a process also known as image restoration or decoding from meshes. T...
Article
Full-text available
Cost-effective production of lignocellulosic biofuel requires efficient breakdown of cell walls present in plant biomass to retrieve the wall polysaccharides for fermentation. In-depth knowledge of plant cell wall composition is therefore essential for improving the fuel production process. The precise spatial three-dimensional (3D) organization of...
Conference Paper
Slice interpolation is a fast growing field in medical image processing. Intensity-based interpolation and object-based interpolation are two major groups of methods in the literature. In this paper an object based method for slice interpolation using a modified version of curvature registration is proposed. Due to non-linear nature of image regist...
Conference Paper
Full-text available
In the current paper, we present a series of algorithms to generate high quality, feature-sensitive, and adaptive meshes from a given grayscale image. The Canny’s edge detector is employed to guarantee that important image features are preserved in the meshes. A halftoning-based sampling strategy is adopted to provide feature-sensitive and adaptive...
Article
In order to compare the similarity between two protein models, a shape analysis algorithm based on skeleton extraction is presented in this paper. It firstly extracts the skeleton of a given protein surface by an improved Multi-resolution Reeb Graph (MRG) method. A number of points on the model surface are then collected to compute the local diamet...
Article
Three-dimensional shape-based descriptors have been widely used in object recognition and database retrieval. In the current work, we present a novel method called compact Shape-DNA (cShape-DNA) to describe the shape of a triangular surface mesh. While the original Shape-DNA technique provides an effective and isometric-invariant descriptor for sur...
Article
Full-text available
The numerical solution of partial differential equations on arbitrary manifolds continues to generate a lot of interest among scientists in the natural and applied sciences. Herein we develop a simple and efficient method for solving PDEs on manifolds represented as point clouds. By projecting the radial vector of standard RBF kernels onto the loca...
Article
Full-text available
The triangulation of images has become an active research area in recent years for its compressive representation and ease of image processing and visualization. However, little work has been done on how to faithfully recover image intensities from a triangulated mesh of an image, a process also known as image restoration or decoding from meshes. T...
Article
In this paper, a robust algorithm is proposed for reconstructing 2D curve from unorganized point data with a high level of noise and outliers. By constructing the quadtree of the input point data, we extract the “grid-like” boundaries of the quadtree, and smooth the boundaries using a modified Laplacian method. The skeleton of the smoothed boundari...
Article
Slice interpolation is a fast growing field in medical image processing. Intensity-based interpolation and object-based interpolation are two major groups of methods in the literature. In this paper, we describe an object-oriented, optimization method based on a modified version of curvature-based image registration, in which a displacement field i...
Article
In this paper we present a new software toolkit for generating and optimizing surface and volumetric meshes from three-dimensional (3D) biomedical imaging data, targeted at image-based finite element analysis of some biomedical activities in a single material domain. Our toolkit includes a series of geometric processing algorithms including surface...
Article
Intracellular calcium (Ca2+) signaling in cardiac myocytes is vital for proper functioning of the heart. Understanding the intracellular Ca2+ dynamics would give an insight into the functions of normal and diseased hearts. In the current study, spatiotemporal Ca2+ dynamics is investigated in ventricular myocytes by considering Ca2+ release and re-u...
Article
Spatial-temporal calcium dynamics due to calcium release, buffering, and re-uptaking plays a central role in studying excitation-contraction (E-C) coupling in both healthy and defected cardiac myocytes. In our previous work, partial differential equations (PDEs) had been used to simulate calcium dynamics with realistic geometries extracted from ele...
Article
In previous works on point registration based on finite mixture model, the correspondence probability is often determined by exploiting global relationship in the point set instead of considering the local point distribution. That results in a simplified registration model. In this paper a feature-dependant finite mixture model (FDMM) is proposed....
Article
The emergence of laser/LiDAR sensors, reliable multi‐view stereo techniques and more recently consumer depth cameras have brought point clouds to the forefront as a data format useful for a number of applications. Unfortunately, the point data from those channels often incur imperfection, frequently contaminated with severe outliers and noise. This...
Article
We conducted super-resolution light microscopy (LM) imaging of the distribution of ryanodine receptors (RyRs) and caveolin-3 (CAV3) in mouse ventricular myocytes. Quantitative analysis of data at the surface sarcolemma showed that 4.8% of RyR labeling colocalized with CAV3 whereas 3.5% of CAV3 was in areas with RyR labeling. These values increased...
Article
A method of triangular surface mesh smoothing is presented to improve angle quality by extending the original optimal Delaunay triangulation (ODT) to surface meshes. The mesh quality is improved by solving a quadratic optimization problem that minimizes the approximated interpolation error between a parabolic function and its piecewise linear inter...
Article
In this paper, we propose an effective solution to reconstruct solid models of existing objects. Specifically, we convert the model reconstruction problem into the issue of feature parameter extraction, and thereby design diverse methods to extract the parameters of basic design features from input surface meshes. After extracting the feature param...
Article
We propose a robust method for surface mesh reconstruction from unorganized, unoriented, noisy and outlier‐ridden 3D point data. A kernel‐based scale estimator is introduced to estimate the scale of inliers of the input data. The best tangent planes are computed for all points based on mean shift clustering and adaptive scale sample consensus, foll...
Chapter
The optimal Delaunay triangulation (ODT) is an effective approach in improving the quality of inner vertices of a tetrahedral mesh. Recently it had been extended boundary-optimized Delaunay triangulation (B-ODT), in which both inner and boundary vertices are repositioned by analytically minimizing the \(\mathcal{L}^{1}\) error between a paraboloid...
Article
Despite its great success in improving the quality of a tetrahedral mesh, the original optimal Delaunay triangulation (ODT) is designed to move only inner vertices and thus cannot handle input meshes containing "bad" triangles on boundaries. In the current work, we present an integrated approach called boundary-optimized Delaunay triangulation (B-O...
Article
We present a framework for 3D model reconstruction, which has potential applications to a spectrum of engineering problems with impacts on rapid design and prototyping, shape analysis, and virtual reality. The framework, composed of four main components, provides a systematic solution to reconstruct geometric model from the surface mesh of an exist...
Article
Image segmentation plays an important role in many medical imaging systems, yet in complex circumstances it remains an open problem. One of the main difficulties is the intensity inhomogeneity in an image. In order to tackle this problem, we first introduce a region-based level set segmentation framework to unify the traditional global and local me...
Conference Paper
Full-text available
This paper describes a new method for image edge enhancement and boundary segmentation. Like many interactive graph-based segmentation methods, users are asked to provide some foreground (or object) and background seeds. A set of randomly generated points representing the foreground are paired with another set of random points representing the back...
Article
Mesh denoising is crucial for improving noisy meshes acquired from scanning devices and digitization processes. This paper proposes a general, robust approach for mesh denoising by using a combination of bilateral filtering, feature recognition, anisotropic neighborhood searching, and surface fitting and projection techniques. Motivated by the bila...
Article
Tetrahedral meshes are being extensively used in finite element methods (FEM). This paper proposes an algorithm to generate feature-sensitive and high-quality tetrahedral meshes from an arbitrary surface mesh model. A top-down octree subdivision is conducted on the surface mesh and a set of tetrahedra are constructed using adaptive body-centered cu...

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