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September 2008 - August 2011
Publications
Publications (69)
We numerically investigate normal diffusion in a two-dimensional athermal suspension of active particles undergoing motility-induced phase separation. The particles are modeled as achiral Janus disks with fixed self-propulsion speed and weakly fluctuating orientation. When plotted versus the overall suspension packing fraction, the relevant diffusi...
We investigated both numerically and analytically the drift of a Brownian particle in a ratchet potential under stochastic resetting with fat‐tailed distributions. As a study case we chose a Pareto time distribution with tail index β. We observed that for 1/2<β<1 ${1/2\char60 \beta \char60 1}$ rectification occurs even if for β<1 ${\beta \char60 1}...
We investigated, both analytically and numerically, the dynamics of a noiseless overdamped active particle in a square lattice of planar counter-rotating convection rolls. Below a first threshold of the self-propulsion speed, a fraction of the simulated particle's trajectories spatially diffuse around the convection rolls, whereas the remaining tra...
We propose a simple model of colloidal suspension, whereby individual particles change their diffusivity from high (hot) to low (cold), as the local concentration of their closest peers grows larger than a certain threshold. Such a non-reciprocal interactive mechanism is known in biology as quorum sensing. Upon tuning the parameters of the adopted...
Inspired by the problem of biofilm growth, we numerically investigate clustering in a twodimensional suspension of active (Janus) particles of finite size confined in a circular cavity. Their dynamics is regulated by a non-reciprocal mechanism that causes them to switch from active to passive above a certain threshold of the perceived near-neighbor...
We propose a generalization of the stochastic resetting mechanism for a Brownian particle diffusing in a one-dimensional periodic potential: randomly in time, the particle gets reset at the bottom of the potential well it was in. Numerical simulations show that in mirror asymmetric potentials, stochastic resetting rectifies the particle's dynamics,...
We propose a generalization of the stochastic resetting mechanism for a Brownian particle diffusing in a one-dimensional periodic potential: randomly in time, the particle gets reset at the bottom of the potential well it was in. Numerical simulations show that in mirror asymmetric potentials, stochastic resetting rectifies the particle's dynamics,...
We propose a two-dimensional model of biochemical activation process, whereby self-propelling particles of finite correlation times are injected at the center of a circular cavity with constant rate equal to the inverse of their lifetime; activation is triggered when one such particle hits a receptor on the cavity boundary, modeled as a narrow pore...
We numerically investigated the dynamics of a mixture of finite‐size active and passive disks in a linear array of two‐dimensional convection rolls. The interplay of advection and steric interactions produces a number of interesting effects, like the stirring of a passive colloidal fluid by a small fraction of slow active particles, or the separati...
We numerically investigated the clustering of a uniform suspension of finite-size disks in a linear array of two-dimensional convection cells. We observed that, due to steric interactions, the disks tend to form coherently rotating spatial structures at the center of each cell, as a combined effect of advection and pair collisions. Micellar, ring-l...
We develop a unified Hamiltonian approach to the diffusion of a particle coupled to a dissipative environment, an archetypal model widely invoked to interpret condensed phase phenomena, such as polymerization and cold-atom diffusion in optical lattices. By appropriate choices of the coupling functions, we reformulate phenomenological diffusion mode...
The self-propulsion of a Janus particle suspended in a dilute gas at equilibrium is investigated in the free molecular regime. The Janus particle consists of two hemispheres with different momentum accommodation factors; the particle and the surrounding gas are held at different constant temperatures. Based on the gas kinetic theory, we calculate t...
We numerically investigated the diffusion of a heavy active Brownian particle in a linear periodic array of steady planar counter-rotating convection rolls at high Péclet numbers. We show that, under certain conditions, the particle rises to the surface even if it is denser than the suspension fluid, and floats there for exceedingly long times. Suc...
Brownian particles suspended in disordered crowded environments often exhibit non-Gaussian normal diffusion (NGND), whereby their displacements grow with mean square proportional to the observation time and non-Gaussian statistics. Their distributions appear to decay almost exponentially according to “universal” laws largely insensitive to the obse...
Undesired advection effects are unavoidable in most nano-technological applications involving active matter. However, it is conceivable to govern the transport of active particles at the small scales by suitably tuning the relevant advection and self-propulsion parameters. To this purpose, we numerically investigated the Brownian motion of active J...
We numerically investigate the transport of a passive colloidal particle in a periodic array of planar counter-rotating convection rolls, at high Péclet numbers. It is shown that an external bias, oriented parallel to the array, produces a huge excess diffusion peak, in cases where bias and advection drag become comparable. This effect is not restr...
We numerically investigated the phenomenon of non-Gaussian normal diffusion of a Brownian colloidal particle in a periodic array of planar counter-rotating convection rolls. At high Péclet numbers, normal diffusion is observed to occur at all times with non-Gaussian transient statistics. This effect vanishes with increasing the observation time. Th...
We numerically investigated the transport of a passive colloidal particle in a one-dimensional periodic array of planar counter-rotating convection rolls at high Péclet numbers. We show that advection-enhanced diffusion is drastically suppressed by an external transverse bias but strongly reinforced by a longitudinal drive of appropriate intensity....
We numerically investigate the transport of a Brownian colloidal particle in a square array of planar counter-rotating convection rolls at high Péclet numbers. We show that an external force produces huge excess peaks of the particle’s diffusion constant with a height that depends on the force orientation and intensity. In sharp contrast, the parti...
Brownian particles suspended in disordered crowded environments often exhibit non-Gaussian normal diffusion (NGND), whereby their displacements grow with mean square proportional to the observation time and non-Gaussian statistics. Their distributions appear to decay almost exponentially according to "universal" laws largely insensitive to the obse...
We numerically investigated the diffusion of an active Janus particle in periodic arrays of planar counter-rotating convection rolls at high P\'eclet numbers. We considered convection patterns with distinct longitudinal and transverse advection properties and characterized the dependence of the relevant diffusion constants on the particle's dynamic...
We numerically investigated the transient dynamics of a passive colloidal particle in a periodic array of planar counter-rotating convection rolls at high Péclet numbers. We discovered that the distributions of first-exit times out of a single convection roll exhibit distinct regimes: an exponential tail, due to the noise-assisted diffusion of the...
It is often desirable to enhance the motility of active nano- or microscale swimmers such as, e.g., self-propelled Janus particles as agents of chemical reactions or weak sperm cells for better chances of successful fertilization. Here we tackle this problem based on the idea that motility can be transferred from a more active guest species to a le...
It is often desirable to enhance the motility of active nano- or microscale swimmers such as, e.g., self-propelled Janus particles as agents of chemical reactions or weak sperm cells for better chances of successful fertilization. Here we tackle this problem based on the idea that motility can be transferred from a more active guest species to a le...
The diffusion of an artificial active particle in a two-dimensional periodic pattern of stationary convection cells is investigated by means of extensive numerical simulations. In the limit of large Péclet numbers, i.e., for self-propulsion speeds below a certain depinning threshold and weak rototranslational fluctuations, the particle undergoes as...
The diffusion of an artificial active particle in a two-dimensional periodic pattern of stationary convection cells is investigated by means of extensive numerical simulations. In the limit of large P\'eclet numbers, i.e., for self-propulsion speeds below a certain depinning threshold and weak roto-translational fluctuations, the particle undergoes...
A Brownian particle floating in a narrow corrugated (sinusoidal) channel with fluctuating cross section exhibits non-Gaussian normal diffusion. Its displacements are distributed according to a Gaussian law for very short and asymptotically large observation times, whereas a robust exponential distribution emerges for intermediate observation times...
A Brownian particle floating in a narrow corrugated (sinusoidal) channel with fluctuating cross section exhibits non-Gaussian normal diffusion. Its displacements are distributed according to a Gaussian law for very short and asymptotically large observation times, whereas a robust exponential distribution emerges for intermediate observation times...
We investigate the one- and two-dimensional diffusion limited reactions A + A → 0 and A + B → 0 with A active Janus particles and B passive particles in thermal equilibrium. We show that by increasing the self-propulsion time of the A particles, the reactant densities decay faster, at least for time transients of potential interest for chemical app...
Gasochromic based optical hydrogen sensors have attracted much attention as normal temperature sensors. The behaviors of the hydrogen diffusion largely affect the reaction process and the sensitivity. However, few researches focused on the influence of hydrogen diffusion in gasochromic films. Here, we report a method to pre-split the H 2 molecule a...
The heat transfer from nanoparticles (NPs) to gas of photothermal effect is investigated by taking into account both conduction and radiation. The steady-state and unsteady-state heat transfer processes are studied analytically and numerically, respectively. In contrast to the photothermal effect in liquid with metal NPs, in which the radiation is...
We investigate the dynamics of two identical artificial active particles suspended in a free-standing fluid film with a trap of finite radius in
an acoustic tweezer. In the two dimensional Oseen approximation, their hydrodynamic coupling is long ranged, which naturally raises the
question as under what conditions they can simultaneously reside in t...
In many natural and artificial devices diffusive transport takes place in confined geometries with corrugated boundaries. Such boundaries cause both entropic and hydrodynamic effects, which have been studied only for the case of spherical particles. Here we experimentally investigate the diffusion of particles of elongated shape confined in a corru...
In many natural and artificial devices diffusive transport takes place in confined geometries with corrugated boundaries. Such boundaries cause both entropic and hydrodynamic effects, which have been studied only for the case of spherical particles. Here we experimentally investigate diffusion of particles of elongated shape confined into a corruga...
Interfacial thermal conductance between dissimilar materials plays an important role in solving the overheating problem and thus improving the performance of photonic and electronic devices, especially those at micro- and nano-scale. However, conclusive heat transfer mechanism across interfaces is absent, especially across metal–nonmetal interfaces...
The mechanism of thermal conductivity in amorphous polymers, especially polymer fibers, is unclear in comparison with that in inorganic materials. Here, we report the observation of a crossover of heat conduction behavior from three dimensions to quasi-one dimension in polyimide nanofibers at a given temperature. A theoretical model based on the ra...
The dynamics of a pair of identical artificial microswimmers bound inside two harmonic traps, in a thin sheared fluid film, is numerically investigated. In a two-dimensional Oseen approximation, the hydrodynamic pair coupling is long-ranged and proportional to the particle radius to film thickness ratio. On increasing such ratio above a certain thr...
The mechanism of thermal conductivity in amorphous polymers, especially polymer fibers, is unclear in comparison with that in inorganic materials. Here, we report the observation of across over of heat conduction behavior from three dimensions (3D) to quasi-one dimension (1D) in Polyimide(PI) nanofibers at a given temperature. A theoretical model b...
We model the two-dimensional dynamics of a pointlike artificial microswimmer diffusing in a harmonic trap subject to the shear flow of a highly viscous medium. The particle is driven simultaneously by the linear restoring force of the trap, the drag force exerted by the flow, and the torque due to the shear gradient. For a Couette flow, elliptical...
Significance
When a particle diffuses in a corrugated channel, the channel’s boundaries have a twofold effect of limiting the configuration space accessible to the particle and increasing its hydrodynamic drag. Analytical and numerical approaches well-reproduce the former (entropic) effect, while ignoring the latter (hydrodynamic) effect. Here, we...
Thermal conductance of a homogeneous 1D nonlinear lattice system with neareast neighbor interactions has recently been computationally studied in detail by Li et al [Eur. Phys. J. B {\bf 88}, 182 (2015)], where its power-law dependence on temperature $T$ for high temperatures is shown. Here, we address its entire temperature dependence, in addition...
Confined diffusion characterizes transport in many natural and artificial devices, such as ionic channels, zeolites, and nanopores. While this important subject has been extensively studied analytically and by numerical simulations, systematic experimental investigations are rare. Here, we experimentally measure colloidal diffusion times in microch...
We study the 3D dynamics of an elastic dimer consisting of an active swimmer bound to a passive cargo, both suspended in a Couette flow. Using numerical simulations, we determine the diffusivity of such an active dimer in the presence of long-range hydrodynamic interactions for different values of its self-propulsion speed and the Couette flow. We...
Thermal conductance of a homogeneous 1D nonlinear lattice system with neareast neighbor interactions has recently been computationally studied in detail by Li et al [Eur. Phys. J. B {\bf 88}, 182 (2015)], where its power-law dependence on temperature $T$ for high temperatures is shown. Here, we address its entire temperature dependence, in addition...
We investigate both analytically and by numerical simulation the relaxation of an overdamped Brownian particle in a 1D multiwell potential. We show that the mean relaxation time from an injection point inside the well down to its bottom is dominated by statistically rare trajectories that sample the potential profile outside the well. As a conseque...
We investigate both analytically and by numerical simulation the relaxation of an overdamped Brownian particle in a 1D multiwell potential. We show that the mean relaxation time from an injection point inside the well down to its bottom is dominated by statistically rare trajectories that sample the potential profile outside the well. As a conseque...
The mechanism of thermal conductivity in amorphous polymers, especially polymer fibers, is unclear in comparison with that in inorganic materials. Here, we report the observation of across over of heat conduction behavior from three dimensions (3D) to quasi-one dimension (1D) in Polyimide(PI) nanofibers at a given temperature. A theoretical model b...
An active swimmer can tow a passive cargo by binding it to form a self-propelling dimer. The orientation of the cargo relative to the axis of the active dimer’s head is determined by the hydrodynamic interactions associated with the propulsion mechanism of the latter. We show how the tower-cargo angular configuration greatly influences the dimer’s...
An active swimmer can tow a passive cargo by binding it to form a self-propelling dimer. The orientation of the cargo relative to the axis of the active dimer's head is determined by the hydrodynamic interactions associated with the propulsion mechanism of the latter. We show how the tower-cargo angular configuration greatly influences the dimer's...
We theoretically investigate the spin-dependent Seebeck effect in an Aharonov-Bohm mesoscopic ring in the presence of both Rashba and Dresselhaus spin-orbit interactions under magnetic flux perpendicular to the ring. We apply the Green's function method to calculate the spin Seebeck coefficient employing the tight-binding Hamiltonian. It is found t...
We theoretically investigate the spin-dependent Seebeck effect in an Aharonov-Bohm mesoscopic ring in the presence of both Rashba and Dresselhaus spin-orbit interactions under magnetic flux perpendicular to the ring. We apply the Green's function method to calculate the spin Seebeck coefficient employing the tight-binding Hamiltonian. It is found t...
We model the two-dimensional diffusive dynamics of an eccentric artificial microswimmer in a highly viscous medium. We assume that the swimmer's propulsion results from an effective force applied to a center distinct from its center of mass, both centers resting on a body's axis parallel to its average self-propulsion velocity. Moreover, we allow f...
A self-propelled artificial microswimmer is often modeled as a ballistic
Brownian particle moving with constant speed aligned along one of its axis, but
changing direction due to random collisions with the environment. Similarly to
thermal noise, its angular randomization is described as a memoryless
stochastic process. Here, we speculate that fini...
The energy efficiency in human activities is low, most of the energy is wasted in the form of waste heat. Waste heat harvesting and thermal management are crucial issues to the economy and the environmental protection. Using artificial microstructure materials in thermal energy transfer and heat flux manipulation is a multidisciplinary field which...
We numerically investigate the motion of active artificial microswimmers
diffusing in a fuel concentration gradient. We observe that, in the steady
state, their probability density accumulates in the low-concentration regions,
whereas a tagged swimmer drifts with velocity depending in modulus and
orientation on how the concentration gradient affect...
Transport and diffusion of heat in one dimensional (1D) nonlinear systems
which {\it conserve momentum} is typically thought to proceed anomalously.
Notable exceptions, however, exist of which the rotator model is a prominent
case. Therefore, the quest arises to identify the origin of manifest anomalous
transport in those low dimensional systems. H...
In contrary to other 1D momentum-conserving lattices such as the Fermi-Pasta-Ulam β (FPU-β) lattice, the 1D coupled rotator lattice is a notable exception which conserves total momentum while exhibits normal heat conduction behavior. The temperature behavior of the thermal conductivities of 1D coupled rotator lattice had been studied in previous wo...
We investigated the transport diffusivity of artificial microswimmers, a.k.a. Janus particles, in the absence of external biases. We considered the case of chiral Janus particles moving either in the bulk or in sinusoidal channels with reflecting walls. Their self-diffusion constants turned out to depend on both the strength and the chirality of th...
We numerically simulate the diffusion of overdampd pointlike Janus particles along narrow two-dimensional periodically corrugated channels with reflecting walls. The self-propulsion velocity of the particle is assumed to rotate subject to an intrinsic bias modeled by a torque. Breaking the mirror symmetry of the channel with respect to its axis suf...
We review recent advances in rectification control of artificial
microswimmers, also known as Janus particles, diffusing along narrow,
periodically corrugated channels. The swimmer self-propulsion mechanism is
modeled so as to incorporate a nonzero torque (propulsion chirality). We first
summarize the effects of chirality on the autonomous current...
Rectification of electron wave-packets propagating along a quasi-one dimensional chain is commonly achieved via the simultaneous action of nonlinearity and longitudinal asymmetry, both confined to a limited portion of the chain termed wave diode. However, it is conceivable that, in the presence of an external magnetic field, spatial asymmetry perpe...
In this review we investigate the rotation effect in the motion of coupled dimer in a two-dimensional asymmetric periodic potential. Free rotation does not generate directed transport in translational direction, while we find it plays an critical role in the motors motility when the dimer moves under the effect of asymmetry ratchet potential. In th...
In this thesis we analytically and numerically study the noise effects on transport: 1) noisy transport in confined geometries and 2) noise-assisted generation and propagation of electrical signals in neurons. In the study of nano-scaled transport, the geometrical confinement must be taken into account and we need to deal with the novel entropic tr...
The effect of intrinsic channel noise is investigated for the dynamic response of a neuronal cell with a delayed feedback loop. The loop is based on the so-called autapse phenomenon in which dendrites establish connections not only to neighboring cells but also to its own axon. The biophysical modeling is achieved in terms of a stochastic Hodgkin-H...
We study the transport of point size particles in micro-sized two-dimensional periodic channels, exhibiting periodically varying cross-sections. The particles are subjected to a constant external force acting alongside the direction of the longitudinal channel axis and a varying force stemming from a periodic potential profile. While particle trans...
Noisy saltatory spike propagation along myelinated axons is studied within a stochastic Hodgkin-Huxley model. The intrinsic noise (whose strength is inverse proportional to the nodal membrane size) arising from fluctuations of the number of open ion channels influences the dynamics of the membrane potential in a node of Ranvier where the sodium ion...
We analyze the diffusive transport of Brownian particles in narrow channels
with periodically varying cross-section. The geometrical confinements lead to
entropic barriers, the particle has to overcome in order to proceed in
transport direction. The transport characteristics exhibit peculiar behaviors
which are in contrast to what is observed for t...
Partial synchronization (PaS) on regular networks with a few non-local
couplings are studied. The criterion that PaS can emerge in any given
network and some relevant phenomena about Lyapunov exponents are
found. Theoretical and numerical analysis show that the non-local
coupling is the key mechanism of the emergence of PaS.