Yunpeng Shi

Yunpeng Shi

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18
Publications
808
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88
Citations
Introduction

Publications

Publications (18)
Preprint
Full-text available
Group synchronization plays a crucial role in global pipelines for Structure from Motion (SfM). Its formulation is nonconvex and it is faced with highly corrupted measurements. Cycle consistency has been effective in addressing these challenges. However, computationally efficient solutions are needed for cycles longer than three, especially in prac...
Article
Full-text available
Principal component analysis (PCA) plays an important role in the analysis of cryo-electron microscopy (cryo-EM) images for various tasks such as classification, denoising, compression, and ab initio modeling. We introduce a fast method for estimating a compressed representation of the 2-D covariance matrix of noisy cryo-EM projection images affect...
Preprint
Principal component analysis (PCA) plays an important role in the analysis of cryo-EM images for various tasks such as classification, denoising, compression, and ab-initio modeling. We introduce a fast method for estimating a compressed representation of the 2-D covariance matrix of noisy cryo-electron microscopy projection images that enables fas...
Article
Background and Objective: The contrast of cryo-EM images varies from one to another, primarily due to the uneven thickness of the ice layer. This contrast variation can affect the quality of 2-D class averaging, 3-D ab-initio modeling, and 3-D heterogeneity analysis. Contrast estimation is currently performed during 3-D iterative refinement. As a r...
Preprint
We propose a novel quadratic programming formulation for estimating the corruption levels in group synchronization, and use these estimates to solve this problem. Our objective function exploits the cycle consistency of the group and we thus refer to our method as detection and estimation of structural consistency (DESC). This general framework can...
Preprint
Full-text available
Previous partial permutation synchronization (PPS) algorithms, which are commonly used for multi-object matching, often involve computation-intensive and memory-demanding matrix operations. These operations become intractable for large scale structure-from-motion datasets. For pure permutation synchronization, the recent Cycle-Edge Message Passing...
Preprint
Background and Objective: The contrast of cryo-EM images vary from one to another, primarily due to the uneven thickness of ice layers. The variation of contrast can affect the quality of 2-D class averaging, 3-D ab-initio modeling, and 3-D heterogeneity analysis. Contrast estimation is currently performed during 3-D iterative refinement. As a resu...
Preprint
Full-text available
We develop new statistics for robustly filtering corrupted keypoint matches in the structure from motion pipeline. The statistics are based on consistency constraints that arise within the clustered structure of the graph of keypoint matches. The statistics are designed to give smaller values to corrupted matches and than uncorrupted matches. These...
Article
Full-text available
We propose a general framework for solving the group synchronization problem, where we focus on the setting of adversarial or uniform corruption and sufficiently small noise. Specifically, we apply a novel message passing procedure that uses cycle consistency information in order to estimate the corruption levels of group ratios and consequently so...
Preprint
Full-text available
We propose an efficient algorithm for solving group synchronization under high levels of corruption and noise, while we focus on rotation synchronization. We first describe our recent theoretically guaranteed message passing algorithm that estimates the corruption levels of the measured group ratios. We then propose a novel reweighted least squares...
Preprint
Full-text available
We propose an efficient and robust iterative solution to the multi-object matching problem. We first clarify serious limitations of current methods as well as the inappropriateness of the standard iteratively reweighted least squares procedure. In view of these limitations, we propose a novel and more reliable iterative reweighting strategy that in...
Preprint
Full-text available
We propose a general framework for group synchronization with adversarial corruption and sufficiently small noise. Specifically, we apply a novel message passing procedure that uses cycle consistency information in order to estimate the corruption levels of group ratios and consequently infer the corrupted group ratios and solve the synchronization...
Article
Full-text available
We propose a strategy for improving camera location estimation in structure from motion. Our setting assumes highly corrupted pairwise directions (i.e., normalized relative location vectors), so there is a clear room for improving current state-of-the-art solutions for this problem. Our strategy identifies severely corrupted pairwise directions by...
Article
Full-text available
We establish exact recovery for the Least Unsquared Deviations (LUD) algorithm of \"{O}zyesil and Singer. More precisely, we show that for sufficiently many cameras with given corrupted pairwise directions, where both camera locations and pairwise directions are generated by a special probabilistic model, the LUD algorithm exactly recovers the came...

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