Víctor M. Eguíluz

BC3-Basque Centre for Climate Change | BCCC

In this paper we extract the topology of the semantic space in its encyclopedic acception, measuring the semantic flow between the different entries of the largest modern encyclopedia, Wikipedia, and thus creating a directed complex network of semantic flows. Notably at the percolation threshold the semantic space is characterised by scale-free beh...

We address the role of community structure of an interaction network in ordering dynamics, as well as associated forms of metastability. We consider the voter and AB model dynamics in a network model which mimics social interactions. The AB model includes an intermediate state between the two excluding options of the voter model. For the voter mode...

Bio‐logging data obtained by tagging animals are key to addressing global conservation challenges. However, the many thousands of existing bio‐logging datasets are not easily discoverable, universally comparable, nor readily accessible through existing repositories and across platforms, slowing down ecological research and effective management. A s...

Effective ocean management and the conservation of highly migratory species depend on resolving the overlap between animal movements and distributions, and fishing effort. However, this information is lacking at a global scale. Here we show, using a big-data approach that combines satellite-tracked movements of pelagic sharks and global fishing fle...

Temporal networks model how the interaction between elements in a complex system evolves over time. Just as complex systems display collective dynamics, here we interpret temporal networks as trajectories performing a collective motion in graph space, following a latent graph dynamical system. Under this paradigm, we propose a way to measure how th...

Social interactions are fundamental in animal groups, including humans, and can take various forms, such as competition, cooperation, or kinship. Understanding these interactions in marine environments has been historically challenging due to data collection difficulties. However, advancements in acoustic telemetry now enable remote analysis of suc...

International biodiversity agreements aim to expand protected areas by up to 30%, including areas beyond national jurisdiction. The high seas' extent, shared governance, and limited biodiversity data challenge the identification of large-scale protected areas. This study uses seascapes defined from satellite data as proxies for biodiversity in the...

Understanding how biotic interactions shape ecosystems and impact their functioning, resilience and biodiversity has been a sustained research priority in ecology. Yet, traditional assessments of ecological complexity typically focus on species-species interactions that mediate a particular function (e.g., pollination), overlooking both the synergi...

The reduction in sea ice cover with Arctic warming facilitates shipping through remarkably shorter shipping routes. Automatic identification system (AIS) is a powerful data source to monitor Arctic Ocean shipping. Based on the AIS data from an online platform, we quantified the spatial distribution of shipping through this area, its intensity, and...

Automated positioning devices can generate large datasets with information on the movement of humans, animals and objects, revealing patterns of movement, hot spots and overlaps among others. However, in the case of Automated Information Systems (AIS), attached to vessels, observed strange behaviors in the tracking datasets may come from intentiona...

Northern elephant seals engage in large-scale foraging migrations traveling up to 15,000 Km over 8 months in the northeast Pacific. While traditionally considered solitary migrants, we demonstrate here that female seals migrate in a surprisingly coherent manner, for individual northern elephant seals traveling in over such a large region of the oce...

Human societies depend on marine ecosystems, but their degradation continues. Toward mitigating this decline, new and more effective ways to precisely measure the status and condition of marine environments are needed alongside existing rebuilding strategies. Here, we provide an overview of how sensors and wearable technology developed for humans c...

This research studies the evolution of COVID-19 crude incident rates, effective reproduction number R(t) and their relationship with incidence spatial autocorrelation patterns in the 19 months following the disease outbreak in Catalonia (Spain). A cross-sectional ecological panel design based on n = 371 health-care geographical units is used. Five...

Our understanding of food webs has greatly advanced during the last decade mostly fueled by a better integration and accuracy of the data. Connecting evolutionary to ecological processes in food webs remains challenging and requires the accommodation of different levels of biological organization, accounting for information processing traits, spati...

Biodiversity can increase in both high‐ and low‐connected landscapes. However, we lack predictions related to biodiversity dynamics when accounting for the temporal heterogeneity in the connections among the habitats of a landscape. Here, we study the relationship between fluctuations in landscape connectivity and biodiversity dynamics at local and...

By interpreting a temporal network as a trajectory of a latent graph dynamical system, we introduce the concept of dynamical instability of a temporal network and construct a measure to estimate the network maximum Lyapunov exponent (nMLE) of a temporal network trajectory. Extending conventional algorithmic methods from nonlinear time-series analys...

Interactions between different diseases may change their dynamics. Thus, these interactions represent a source of uncertainty in the modeling of empirical data when the symptoms of both infections are hard to distinguish. We recall previously proposed models of interacting infections, generalizing them to non-symmetric scenarios, showing that both...

Significance Global vessel traffic is increasing alongside world economic growth. The potential for rising lethal ship strikes on endangered species of marine megafauna, such as the plankton-feeding whale shark, remains poorly understood since areas of highest overlap are seldom determined across an entire species range. Here we show how satellite...

The COVID-19 pandemic has been testing countries’ capacities and scientific preparedness to actively respond and collaborate on a common global threat. It has also heightened awareness of the urgent need to empirically describe and analyze health inequalities to be able to act effectively. In turn, this raises several important questions that need...

The race between pathogens and their hosts is a major evolutionary driver, where both reshuffle their genomes to overcome and reorganize the defenses for infection, respectively. Evolutionary theory helps formulate predictions on the future evolutionary dynamics of SARS-CoV-2, which can be monitored through unprecedented real-time tracking of SARS-...

Animals follow specific movement patterns and search strategies to maximize encounters with essential resources (e.g. prey, favourable habitat) while minimizing exposures to suboptimal conditions (e.g. competitors, predators). While describing spatiotemporal patterns in animal movement from tracking data is common, understanding the associated sear...

106,107 ✉ replying to A. V. Harry & J. M. Braccini Nature https://doi.org/10.1038/s41586-021-03463-w (2021) Our global analysis 1 estimated the overlap and fishing exposure risk (FEI) using the space use of satellite-tracked sharks and longline fishing effort monitored by the automatic identification system (AIS). In the accompanying Comment, Harry...

This article is a response to Murua et al.'s Matters Arising article in Nature, "Shark mortality cannot be assessed by fishery overlap alone," which arose from arising from N. Queiroz et al. Nature https://doi.org/10.1038/s41586-019-1444-4 (2019).

The global lockdown to mitigate COVID-19 pandemic health risks has altered human interactions with nature. Here, we report immediate impacts of changes in human activities on wildlife and environmental threats during the early lockdown months of 2020, based on 877 qualitative reports and 332 quantitative assessments from 89 different studies. Hundr...

The Coronavirus disease 2019 (Covid-19) pandemic has brought the world to a standstill. Healthcare systems are critical to maintain during pandemics, however, providing service to sick patients has posed a hazard to frontline healthcare workers (HCW) and particularly those caring for elderly patients. Various approaches are investigated to improve...

Evolutionary ecology theory provides an avenue to anticipate the future behavior of SARS-CoV-2. Here we quantify the accelerating evolution of SARS-CoV-2 by tracking the SARS-CoV-2 mutation globally, with a focus on the Receptor Binding Domain (RBD) of the spike protein believed to determine infectivity. We estimate that 384 million people were inf...

An anthropogenic cacophony Sound travels faster and farther in water than in air. Over evolutionary time, many marine organisms have come to rely on sound production, transmission, and reception for key aspects of their lives. These important behaviors are threatened by an increasing cacophony in the marine environment as human-produced sounds have...

Fisheries in waters beyond national jurisdiction (“high seas”) are difficult to monitor and manage. Their regulation for sustainability requires critical information on how fishing effort is distributed across fishing and landing areas, including possible border effects at the exclusive economic zone (EEZ) limits. We infer the global network linkin...

Current animal monitoring systems have improved our knowledge of quantitative animal ecology. There are many electronic tracking technologies such as VHF/UHF telemetry, light-level geolocation, ARGOS satellite telemetry and GPS tracking. To reach the desired level of information retrieval requires the planning of adequate equipment effort and cover...

The Spanish government declared the lockdown on March 14th, 2020 to tackle the fast-spreading of COVID-19. As a consequence, the Balearic Islands remained almost fully isolated due to the closing of airports and ports, these isolation measures and the home-based confinement have led to a low prevalence of COVID-19 in this region. We propose a compa...

The role of the microbiome in sustaining seagrasses has recently been highlighted. However, our understanding of the seagrass microbiome lacks behind that of other organisms. Here, we analyse the endophytic and total bacterial communities of leaves, rhizomes, and roots of six Red Sea seagrass species and their sediments. The structure of seagrass b...

An amendment to this paper has been published and can be accessed via a link at the top of the paper.

Massive metagenomic sequencing combined with gene prediction methods were previously used to compile the gene catalogue of ocean and host‐associated microbes. Global expeditions conducted over the past 15 years have sampled to ocean to build a catalogue of genes from pelagic microbes. Here we undertook a large sequencing effort of a perturbed Red S...

Understanding the response of ecological networks to perturbations and disruptive events is needed to anticipate the biodiversity loss and extinction cascades. Here, we study how network plasticity reshapes the topology of mutualistic networks in response to species loss. We analyze more than one hundred empirical mutualistic networks and considere...

Global ocean expeditions have provided minimum estimates of ocean’s prokaryote diversity, supported by apparent asymptotes in the number of prokaryotes with sampling effort, of about 40,000 species, representing <1% of the species cataloged in the Earth Microbiome Project, despite being the largest habitat in the biosphere. Here we demonstrate that...

Tracking data have led to evidence-based conservation of marine megafauna, but a disconnect remains between the many thousands of individual animals that have been tracked and the use of these data in conservation and management actions. Furthermore, the focus of most conservation efforts is within Exclusive Economic Zones despite the ability of th...

Biologging is a scientific endeavor that studies the environment and animals within it by outfitting the latter with sensors of their dynamics as they roam freely in their natural habitats. As wearable technologies advance for the monitoring of human health, it may be instructive to reflect on the successes and failures of biologging in field biolo...

Telemetry is a key, widely used tool to understand marine megafauna distribution, habitat use, behavior, and physiology; however, a critical question remains: “How many animals should be tracked to acquire meaningful data sets?” This question has wide‐ranging implications including considerations of statistical power, animal ethics, logistics, and...

Animal telemetry is a powerful tool for observing marine animals and the physical environments that they inhabit, from coastal and continental shelf ecosystems to polar seas and open oceans. Satellite-linked biologgers and networks of acoustic receivers allow animals to be reliably monitored over scales of tens of meters to thousands of kilometers,...

The metabolic symbiosis with photosynthetic algae allows corals to thrive in the oligotrophic environments of tropical seas. Different aspects of this relationship have been investigated using the emerging model organism Aiptasia. However, many fundamental questions, such as the nature of the symbiotic relationship and the interactions of nutrients...

We study how the community structure of bipartite mutualistic networks changes in a dynamic context. First, we consider a real mutualistic network and introduce extinction events according to several scenarios. We model extinctions as node or interaction removals. For node removal, we consider random, directed and sequential extinctions; for intera...

Interactions often require the proximity between particles. The movement of particles, thus, drives the change of the neighbors which are located in their proximity, leading to a sequence of interactions. In pathogenic contagion, infections occur through proximal interactions, but at the same time, the movement facilitates the co-location of differ...

Networks are fundamental building blocks for representing data, and computations. Remarkable progress in learning in structurally defined (shallow or deep) networks has recently been achieved. Here we introduce evolutionary exploratory search and learning method of topologically flexible networks under the constraint of producing elementary computa...

The transport and storage of quantum information, excitations, and entanglement, within and across complex quantum networks is crucially affected by the presence of noise induced by their surroundings. Generally, the interaction with the environment deteriorates quantum properties initially present, thus limiting the efficiency of any quantum-enhan...

Networks are abundant in biological systems. Small sized over-represented network motifs have been discovered, and it has been suggested that these constitute functional building blocks. We ask whether larger dynamical network motifs exist in biological networks, thus contributing to the higher-order organization of a network. To end this, we intro...

Models of social diffusion reflect processes of how new products, ideas or behaviors are adopted in a population. These models typically lead to a continuous or a discontinuous phase transition of the number of adopters as a function of a control parameter. We explore a simple model of social adoption where the agents can be in two states, either a...

Significance Understanding the key drivers of animal movement is crucial to assist in mitigating adverse impacts of anthropogenic activities on marine megafauna. We found that movement patterns of marine megafauna are mostly independent of their evolutionary histories, differing significantly from patterns for terrestrial animals. We detected a rem...

The rise of the internet coupled with technological innovations such as smartphones have generated massive volumes of geo-referenced data (big data) on human mobility. This has allowed the number of studies of human mobility to rapidly overtake those of animal movement. Today, telemetry studies of animals are also approaching big data status. Here,...

The association between corals and photosynthetic dinoflagellates (Symbiodinium spp.) is the key to the success of reef ecosystems in highly oligotrophic environments, but it is also their Achilles‘ heel due to its vulnerability to local stressors and the effects of climate change. Research during the last two decades has shaped a view that coral h...

Infectious diseases have been modelled on networks that summarise physical contacts or close proximity of individuals. These networks are known to be complex in both their structure and how they change over time. We present an overview of recent progress in numerically determining the epidemic threshold in temporally-switching networks, and illustr...

We study the spreading of cooperative infections in an empirical temporal network of contacts between people, including health care workers and patients, in a hospital. The system exhibits a phase transition leading to one or several endemic branches, depending on the connectivity pattern and the temporal correlations. There are two endemic branche...

Coextinction models are useful to understand community robustness to species loss and resilience to disturbances. We simulated pollinator extinctions in pollination networks by using a hybrid model that combined a recently developed stochastic coextinction model (SCM) for plant extinctions and a topological model (TCM) for animal extinctions. Our m...

Antibiotic-resistant organisms, an increasing source of morbidity and mortality, have a natural reservoir in hospitals, and recent estimates suggest that almost 2 million people develop hospital-acquired infections each year in the US alone. We investigate the temporal network of transfers of Medicare patients across US hospitals over a 2-year peri...

Antibiotic-resistant bacterial infections are a substantial source of morbidity and mortality and have a common reservoir in inpatient settings. Transferring patients between facilities could be a mechanism for the spread of these infections. We wanted to assess whether a network of hospitals, linked by inpatient transfers, contributes to the sprea...