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29
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Introduction
Tom is a senior research associate at the UEA on a two year sabbatical from Cefas.
His research interests are focused on marine biogeochemical observations using autonomous platforms.
These platforms comprise of autonomous buoys, seabed landers, underway "ferrybox" systems, autonomous surface vehicles and buoyancy gliders.
Current research topics include:
- Estimating net primary production using oxygen mass balance methods.
- Optimisation of chlorophyll fluorometry for long term monitoring applications.
- Analysis and interpretation of biogeochemical data sets using Bayesian statistical frameworks.
Additional affiliations
April 2008 - present
Education
October 2013 - September 2020
September 2004 - May 2007
Publications
Publications (29)
Coastal seas represent one of the most valuable and vulnerable habitats on
Earth. Understanding biological productivity in these dynamic regions is
vital to understanding how they may influence and be affected by climate
change. A key metric to this end is net community production (NCP), the net
effect of autotrophy and heterotrophy; however accura...
The magnitude of marine plankton net community production (NCP) is indicative of both the biologically driven exchange of carbon dioxide between the atmosphere and the surface ocean, and the export of organic carbon from the surface ocean to the oceaninterior. In this study the seasonal variability in the NCP of five biogeochemical regions in the N...
There is an immediate need to better understand and monitor shelf sea dissolved oxygen (O2) concentrations. Here we use high-resolution glider observations of turbulence and O2 concentrations to directly estimate the vertical O2 flux into the bottom mixed layer (BML) immediately before the autumn breakdown of stratification in a seasonally stratifi...
There is an immediate need to better understand and monitor shelf sea dissolved oxygen (O2) concentrations. Here we use high-resolution glider observations of turbulence and O2 concentrations to directly estimate the vertical O2 flux into the bottom mixed layer (BML) immediately before the autumn breakdown of stratification in a seasonally stratifi...
What is already happening?
• Since the 1960s, the global oceanic oxygen content has declined by
more than 2%.
• Sustained observations in the North Sea reveal the recent onset of
oxygen deficiency in late summer, partly due to ocean warming. The
intensity and extent of oxygen deficiency has also increased over
time.
• Short-term measurements...
Shelf seas play a key role in both the global carbon cycle and coastal marine ecosystems through the draw-down and fixing of carbon, as measured through phytoplankton net primary production (NPP). Measuring NPP in situ and extrapolating this to the local, regional, and global scale presents challenges however because of limitations with the techniq...
We use modelling and assimilation tools to explore the impact of biogeochemistry on physics in the shelf sea environment, using North-West European Shelf (NWES) as a case study. We demonstrate that such impact is significant: the attenuation of light by biogeochemical substances heats up the upper 20 m of the ocean by up to 1 °C and by a similar ma...
The continental shelf seas are important at a global scale for ecosystem services. These highly dynamic regions are under a wide range of stresses, and as such future management requires appropriate monitoring measures. A key metric to understanding and predicting future change are the rates of biological production. We present here the use of an a...
Shelf-seas play a key role in both the global carbon cycle and coastal marine ecosystems through the drawn-down and fixing of carbon, as measured through phytoplankton net primary production (NPP). Measuring NPP in situ, and extrapolating this to the local, regional and global scale presents challenges however because of limitations with the techni...
The continental shelf seas are important at a global scale for ecosystem services. These highly dynamic regions are under a wide range of stresses and as such future management requires appropriate monitoring measures. A key metric to understanding and predicting future change are the rates of biological productivity. We present here the use of a s...
The ability to make measurements of phosphate (PO43–) concentrations at temporal and spatial scales beyond those offered by shipboard observations offers new opportunities for investigations of the marine phosphorus cycle. We here report the first in situ PO43– dataset from an underwater glider (Kongsberg Seaglider) equipped with a PO43– Lab-on-Chi...
Oceanography has entered an era of new observing platforms, such as biogeochemical‐Argo floats and gliders, some of which will provide three‐dimensional maps of essential ecosystem variables on the North‐West European (NWE) Shelf. In a foreseeable future operational centers will use multi‐platform assimilation to integrate those valuable data into...
The seasonally stratified continental shelf seas are highly productive, economically important environments which are under considerable pressure from human activity. Global dissolved oxygen concentrations have shown rapid reductions in response to anthropogenic forcing since at least the middle of the twentieth century. Oxygen consumption is at th...
The initial online publication contained several typesetting errors. The original article has been corrected.
Shelf seas play an important role in the global carbon cycle, absorbing atmospheric carbon dioxide (CO2) and exporting carbon (C) to the open ocean and sediments. The magnitude of these processes is poorly constrained, because observations are typically interpolated over multiple years. Here, we used 298500 observations of CO2 fugacity (fCO2) from...
This work examines the seasonal cycle of vertical density structure and its influence on primary production in a temperate shelf sea, with a particular focus on the breakdown of stratification in autumn. We do this by combining new, high resolution observations of water column structure, meteorological forcing, nitrate and chlorophyll fluorescence...
Continental shelf seas may have a significant role in oceanic uptake and storage of carbon dioxide (CO2) from the atmosphere, through a ‘continental shelf pump’ mechanism. The northwest European continental shelf, in particular the Celtic Sea (50°N 8°W), was the target of extensive biogeochemical sampling from March 2014 to September 2015, as part...
In situ measurements and ship-based resuspension experiments using annular flumes are used to determine sediment stability and critical erosion thresholds for four sites with significantly different sediment characteristics, located in the Celtic Sea at water depths of 100 m. Seasonal and spatial variability of sediment characteristics and erodabil...
Continental shelf sediments are globally important for biogeochemical activity. Quantification of shelf-scale stocks and fluxes of carbon and nutrients requires the extrapolation of observations made at limited points in space and time. The procedure for selecting exemplar sites to form the basis of this up-scaling is discussed in relation to a UK-...
Results from a 1D setup of the European Regional Seas Ecosystem Model (ERSEM) biogeochemical model were compared with new observations collected under the UK Shelf Seas Biogeochemistry (SSB) programme to assess model performance and clarify elements of shelf-sea benthic biogeochemistry and carbon cycling. Observations from two contrasting sites (mu...
From a data set of observations of Suspended Particulate Matter (SPM) concentration, Turbidity in Formazin Turbity Unit (FTU) and fluorescence-derived chlorophyll-a at a mooring station in Liverpool Bay, in the Irish Sea, we investigate the seasonal variation of the SPM:Turbidity ratio. This ratio changes from a value of around 1 in winter (minimum...
Monitoring temperature of aquatic waters is of great importance, with modelled, satellite and in-situ data providing invaluable insights into long-term environmental change. However, there is often a lack of depth-resolved temperature measurements. Recreational dive computers routinely record temperature and depth, so could provide an alternate and...
Coastal seas represent one of the most valuable and vulnerable habitats on Earth. Understanding biological productivity in these dynamic regions is vital to understanding how they may influence and be affected by climate change. A key metric to this end is net community production (NCP), the net effect of autotrophy and hetrotrophy, however accurat...