Tom Bruijnen

Tom Bruijnen
University Medical Center Utrecht | UMC Utrecht · Department of Radiotherapy

Master of Engineering

About

29
Publications
2,237
Reads
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163
Citations
Citations since 2017
27 Research Items
163 Citations
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20172018201920202021202220230102030405060
20172018201920202021202220230102030405060
Introduction
Massive MRI enthousiast with a background in biomedical engineering. Currently employed (PhD student) at the radiotherapy department at the UMC Utrecht where we develope next generation techniques for online MR guided Radiotherapy.

Publications

Publications (29)
Article
Full-text available
Radiation therapy is a major component of cancer treatment pathways worldwide. The main aim of this treatment is to achieve tumor control through the delivery of ionizing radiation while preserving healthy tissues for minimal radiation toxicity. Because radiation therapy relies on accurate localization of the target and surrounding tissues, imaging...
Article
Immobilization masks are used to prevent patient movement during head and neck (H&N) radiotherapy. Motion restriction is beneficial both during treatment, as well as in the pre-treatment simulation phase, where MRI is often used for target definition. However, the shape and size of the immobilization masks hinder the use of regular, close-fitting M...
Preprint
Full-text available
Purpose: To develop and evaluate a free-breathing respiratory motion compensated 4D (3D+respiration) $T_2$-weighted turbo spin echo sequence with application to radiology and MR-guided radiotherapy. Methods: k-space data are continuously acquired using a rewound Cartesian acquisition with spiral profile ordering (rCASPR) to provide matching contras...
Article
The MR-Linac is a combination of an MR-scanner and radiotherapy linear accelerator (Linac) which holds the promise to increase the precision of radiotherapy treatments with MR-guided radiotherapy by monitoring motion during radiotherapy with MRI, and adjusting the radiotherapy plan accordingly. Optimal MR-guidance for respiratory motion during radi...
Article
Full-text available
Purpose: To enable real-time adaptive MRI-guided radiotherapy (MRIgRT) by obtaining time-resolved 3D deformation vector fields (DVFs) with high spatio-temporal resolution and low latency (< 500 ms). Theory & Methods: Respiratory-resolved T1 -weighted 4D-MRI of 27 patients with lung cancer were acquired using a golden-angle radial stack-of-stars re...
Conference Paper
Full-text available
Synthetic CT (sCT) is a key component of adaptive MR-guided radiotherapy. Generation of thoracic sCT is challenging and benefits from ultrashort echo-time (UTE) imaging that provides contrast in short-T2* tissues such as bone and lung. However, UTE imaging is susceptible to artifacts caused by eddy currents and gradient delays. In this work, we mea...
Preprint
Full-text available
The MR-Linac is a combination of an MR-scanner and radiotherapy linear accelerator (Linac) which holds the promise to increase the precision of radiotherapy treatments with MR-guided radiotherapy by monitoring motion during radiotherapy with MRI, and adjusting the radiotherapy plan accordingly. Optimal MR-guidance for respiratory motion during radi...
Article
Full-text available
Purpose With the recent introduction of the MR‐LINAC, an MR‐scanner combined with a radiotherapy LINAC, MR‐based motion estimation has become of increasing interest to (retrospectively) characterize tumor and organs‐at‐risk motion during radiotherapy. To this extent, we introduce low‐rank MR‐MOTUS, a framework to retrospectively reconstruct time‐re...
Article
Full-text available
Hybrid MRI-linac (MRL) systems enable daily multiparametric quantitative MRI to assess tumor response to radiotherapy. Magnetic Resonance Fingerprinting (MRF) may provide time efficient means of rapid multiparametric quantitative MRI. The accuracy of MRF, however, relies on adequate control over system imperfections, such as eddy currents and $B_1^...
Preprint
Full-text available
Hybrid MRI-linac (MRL) systems enable daily multiparametric quantitative MRI to assess tumor response to radiotherapy. Magnetic Resonance Fingerprinting (MRF) may provide time efficient means of rapid multiparametric quantitative MRI. The accuracy of MRF, however, relies on adequate control over system imperfections, such as eddy currents and B1+,...
Preprint
Full-text available
With the recent introduction of the MR-LINAC, an MR-scanner combined with a radiotherapy LINAC, MR-based motion estimation has become of increasing interest to (retrospectively) characterize tumor and organs-at-risk motion during radiotherapy. To this extent, we introduce low-rank MR-MOTUS, a framework to retrospectively reconstruct time-resolved n...
Article
Respiratory-correlated 4D-MRI can characterize respiratory-induced motion of tumors and organs-at-risk for radiotherapy treatment planning and is a necessity for image guidance of moving tumors treated on an MRI-linac. Essential for 4D-MRI generation is a robust respiratory surrogate signal. We investigated the feasibility of the noise navigator as...
Article
Full-text available
Purpose: To propose an explicit Balanced steady-state free precession (bSSFP) signal model that predicts eddy current-induced steady-state disruptions and to provide a prospective, practical, and general eddy current compensation method. Theory and methods: Gradient impulse response functions (GIRF) were used to simulate trajectory-specific eddy...
Conference Paper
Full-text available
Balanced steady-state free precession sequences offer the highest signal-to-noise ratio and encode multiple physical parameters into the signal. However, the sequence is prone to eddy current-induced steady{state disruptions that can severely compromise the image quality or the physical parameter quantifcation. In this work we describe how the eddy...
Article
For successful abdominal radiotherapy it is crucial to have a clear tumor definition and an accurate characterization of the motion. While dynamic contrast-enhanced (DCE) MRI aids tumor visualization, it is often hampered by motion artifacts. 4D-MRI characterizes this motion, but often lacks the contrast to clearly visualize the tumor. This dual re...
Article
Full-text available
Online adaptive MR-guided radiation therapy improves treatment quality at the expense of considerable longer treatment time. The treatment lengthening partially originates from the preparatory (pre-beam) MR imaging required to encode all the information needed for contour propagation, contour adaptation and replanning. MRI requires several minutes...
Article
Full-text available
Purpose: To quantify intrafractional motion to determine population-based radiotherapy treatment margins for head-and-neck tumors. Methods: Cine MR imaging was performed in 100 patients with head-and-neck cancer on a 3T scanner in a radiotherapy treatment setup. MR images were analyzed using deformable image registration (optical flow algorithm)...
Article
Full-text available
Object To develop a novel approach for highly accelerated Magnetic Resonance Fingerprinting (MRF) acquisition. Materials and methods The proposed method combines parallel imaging, soft-gating and key-hole approaches to highly accelerate MRF acquisition. Slowly varying flip angles (FA), commonly used during MRF acquisition, lead to a smooth change...
Data
First 500 time-points for zero-filled gridding (left) and MRF-SOHO (right) for a 2 mm2 resolution dataset. (AVI)
Data
First 500 time-points for zero-filled gridding (left) and MRF-SOHO (right) for a 1 mm2 resolution dataset. (AVI)
Data
Parametric maps for the standardized phantom using 1000 time-points and 8 spokes, reconstructed with zero-filled MRF and the proposed SOHO. Underestimation bias is observed with zero-filled MRF at higher resolution data (due to higher undersampling factors), whereas accuracy and precision is generally maintained with SOHO. A loss in apparent SNR is...
Article
Full-text available
Magnetic resonance fingerprinting (MRF) can successfully recover quantitative multi-parametric maps of human tissue in a very short acquisition time. Due to their pseudo-random nature, the large spatial undersampling artifacts can be filtered out by an exhaustive search over a pre-computed dictionary of signal fingerprints. This reconstruction appr...

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