Surbhi JainGoethe University Frankfurt · Institute of Molecular Biosciences
Surbhi Jain
Master of Science
About
8
Publications
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Introduction
Anaerobic Microbiology, Thermophilic bacteria, Genetic mutations, Anaerobic physiology, Anaerobic enzyme assays
Publications
Publications (8)
The hydrogen-dependent carbon dioxide reductase is a soluble enzyme complex that directly utilizes hydrogen (H2) for the reduction of carbon dioxide (CO2) to formate in the first step of the acetyl-coenzyme A- or Wood-Ljungdahl pathway (WLP). HDCR consists of 2 catalytic subunits, a hydrogenase and a formate dehydrogenase (FDH) and two small subuni...
Electron bifurcation is a fundamental energy coupling mechanism widespread in microorganisms that thrive under anoxic conditions. These organisms employ hydrogen to reduce CO2, but the molecular mechanisms have remained enigmatic. The key enzyme responsible for powering these thermodynamically challenging reactions is the electron-bifurcating [FeFe...
DNA uptake is widespread among microorganisms and considered a strategy for rapid adaptation to new conditions. While both DNA uptake and adaptation are referred to in the context of natural environments, they are often studied in laboratories under defined conditions. For example, a strain of the thermophile Thermoanaerobacter kivui had been adapt...
Thermoanaerobacter kivui is a thermophilic acetogen that can grow on carbon monoxide as sole carbon and energy source. To identify the gene(s) involved in CO oxidation, the genome sequence was analyzed. Two genes potentially encoding CO dehydrogenases were identified. One, cooS , potentially encodes a monofunctional CO dehydrogenase, whereas anothe...
Thermoanaerobacter kivui is an acetogenic model organism that reduces CO2 with electrons derived from H2 or CO, or from organic substrates in the Wood–Ljugdahl pathway (WLP). For the calculation of ATP yields, it is necessary to know the electron carriers involved in coupling of the oxidative and reductive parts of metabolism. Analyses of key catab...
Acetogenic microorganisms utilize organic substrates such as sugars in addition to hydrogen (H2) + carbon dioxide (CO2). Recently, we reported that the thermophilic acetogenic microorganism Thermoanaerobacter kivui is among the few acetogens that utilize the sugar alcohol mannitol, dependent on a gene cluster encoding mannitol uptake, phosphorylati...
Acetogenic bacteria have gained much attraction in recent years as they can produce different biofuels and biochemicals from H2 plus CO2 or even CO alone, therefore opening a promising alternative route for the production of biofuels from renewable sources compared to existing sugar‐based routes. However, CO metabolism still raises questions concer...
Questions
Questions (5)
Hi, I am doing RNA isolation from Thremoanaerobacter kivui, it a thermophilic bacteria. I am using Qiagen Rneasy Mini kit. I also tried classical method using Trizol reagent. I have always obtained DNA contamination even after Dnase treatment. I am using Turbo Dnase. Does anyone suggest me how to get rid of DNA?
I took the PIPES buffer of pH 7.2 then heat it to 45 degrees and then again cooled it at room temperature and I found the change in pH. pH was reduced to 7.1. Please suggest.
Can anyone help me with some articles in rebuffering the enzyme if it is stored at -20 degree for longer time?
I have read your paper on methylotrophic bacteria from the cactus possessing Ce3+ in xoxF MDH. I would like to know if is helps in nitrogen fixation as well?
I am using PIPES buffer for MeDH enzyme assay. Has anyone used MOPS buffer for it, does it work well with this enzyme assay?