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Introduction
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May 2012 - April 2015
Publications
Publications (167)
ABSTRACT
Motivation
Human activities have been reshaping the natural world for tens of thousands of years, leading to the extinction of hundreds of bird species. Past research has provided evidence of extinction selectivity towards certain groups of species, but trait information is lacking for the majority of clades, especially for prehistoric ext...
Different theories have been proposed to explain the phenotypic changes observed in island lineages, but it remains unclear if predictable evolutionary trajectories can be identified within island communities.
Using a 3D functional space approach, we tested whether insular endemic species tend to evolve towards apparent holes in niche space (expect...
Humans have been driving a global erosion of species richness for millennia, but the consequences of past extinctions for other dimensions of biodiversity-functional and phylogenetic diversity-are poorly understood. In this work, we show that, since the Late Pleistocene, the extinction of 610 bird species has caused a disproportionate loss of the g...
Aim
The impact of climate change on biodiversity is often analysed under a stable evolutionary perspective focused on whether species can currently tolerate warmer climates. However, species may adapt to changes, and particularly under conditions of low habitat fragmentation, standing adaptive genetic variation can spread across populations trackin...
Seasonal migration is an underappreciated driver of animal diversification. Changes in migratory behaviour may favour the establishment of sedentary founder populations and promote speciation if there is sufficient reproductive isolation between sedentary and migratory populations. From a systematic literature review, we here quantify the role of m...
Aim
Answering many fundamental and applied scientific questions relies on accurate geographic range maps for species, such as those compiled by experts working with the International Union for Conservation of Nature (IUCN). However, these maps are resource demanding to produce and only available for a limited number of organisms. Here, we test to w...
Birds are among the best-studied animal groups, but their prehistoric diversity is poorly known due to low fossilization potential. Hence, while many human-driven bird extinctions (i.e., extinctions caused directly by human activities such as hunting, as well as indirectly through human-associated impacts such as land use change, fire, and the intr...
Aim
Trophic rewilding is proposed as an approach to tackle biodiversity loss by restoring ecosystem dynamics through the reintroduction of keystone species. Currently, evidence on the ecological consequences of reintroduction programmes is sparse and difficult to generalize. To better understand the ecological consequences of trophic rewilding, we...
Biodiversity loss is recognized as a grand challenge of the twenty-first century but ascertaining when a species is “lost” can be incredibly difficult—since the absence of evidence is not evidence of absence. This may be a relatively easy task for large and conspicuous animals, but extremely difficult for those living hidden lives or at low populat...
Secondary transitions to aquatic environments are common among vertebrates, and aquatic lineages display several adaptations to this realm, some of which might make these transitions irreversible. At the same time, discussions about secondary transitions often focus only on the marine realm, comparing fully terrestrial with fully aquatic species. T...
Aim
Fruit selection by animal dispersers with different mobility directly impacts plant geographical range size, which, in turn, may impact plant diversification. Here, we examine the interaction between fruit colour, range size and diversification rate in palms by testing two hypotheses: (1) species with fruit colours attractive to birds have larg...
Aim
How much stronger would the effects of herbivorous mammals be in natural ecosystems if human‐linked extinctions and extirpations had not occurred? Many mammal species have experienced range contractions, and numerous species have gone extinct in the late Quaternary, completely or in large part linked to human pressures. Therefore, herbivore con...
The impact of climate change on biodiversity is often analyzed under a stable evolutionary lens, thereby overlooking the adaptive potential of species. Evolutionary rescue, a process where adaptive genetic variation spreads across populations in response to changing climates, can provide an alternative outlook. Here, we combine genomic data, niche...
Aim
Leaves display a remarkable variety of shapes, each with potential ecological advantages in specific climates. While the relations between leaf shape and either climate or height have been relatively well studied in eudicots, the macroecological drivers of shape remain poorly known in monocots. Here, we investigated the associations between cli...
Eight percent of all land surface has been designated as “Key Biodiversity Areas” (KBAs). Since these areas were established based on two percent of all terrestrial species estimated to exist, we ask what would happen if we used all species on Earth to identify additional KBAs. We explore this question at a global scale by using data from 64,110 sp...
Madagascar's biota is hyperdiverse and includes exceptional levels of endemicity. We review the current state of knowledge on Madagascar's past and current terrestrial and freshwater biodiversity by compiling and presenting comprehensive data on species diversity, endemism, and rates of species description and human uses, in addition to presenting...
Madagascar's unique biota is heavily affected by human activity and is under intense threat. Here, we review the current state of knowledge on the conservation status of Madagascar's terrestrial and freshwater biodiversity by presenting data and analyses on documented and predicted species-level conservation statuses, the most prevalent and relevan...
The rapid decline of biodiversity as a consequence of increased environmental impact by human activities requires urgent action against the ongoing crisis. At the heart of conservation policy is the debate on quality versus quantity: should the post-2020 Global Biodiversity Framework focus on maximising total protected area, or pursue instead quali...
Snakebites in sub-Saharan Africa account for 20,000 to 32,000 annual deaths. But since most data is retrieved from hospital or incomplete central databases, and many victims do not seek hospital treatment or prefer traditional remedies, the current numbers are likely underestimated. In order to reduce snakebite incidence by 50% by 2030 as targeted...
We live in a time of highly accelerated extinction, which has the potential to mirror past mass extinction events. However, the rarity of these events and the restructuring of diversity that they cause complicate direct comparisons between the current extinction crisis and earlier mass extinctions. Among animals, turtles (Testudinata) are one of fe...
Trophic rewilding is proposed as an effective approach to tackle biodiversity loss by restoring ecosystem dynamics through the reintroduction of large-bodied animals. Currently, evidence on the effectiveness of reintroduction programs is sparse and difficult to generalize. To better understand the ecological consequences of trophic rewilding, we si...
Eight percent of all land surface has been designated as “Key Biodiversity Areas” (KBAs). Since these areas were established based on only two percent of all terrestrial species estimated to exist, we ask what would happen if we used all species on Earth to identify additional KBAs. We explore this question at a global scale by using data from 64,1...
Aim
Human activities are causing massive increases in extinction rates but might also lead to drastic increases in speciation rates; for example, after human‐mediated spread of species to otherwise unreachable landmasses. The long‐term net anthropogenic effects on biodiversity therefore remain uncertain. Our aim was to assess the combined anthropog...
We thank the authors of the commentary of our paper “Where might we find ecologically intact communities” (Grantham et al., 2022) for their interest in our paper (Plumptre et al., 2021) and their critique of some of the methods and conclusions. We here respond to their commentary, where many of their points have been well-made, with the aim of adva...
Islands frequently harbour unique assemblages of species, yet their ecological roles and differences are largely ignored in island biogeography studies. Here, we examine eco‐evolutionary processes structuring mammal assemblages on oceanic islands worldwide, including all extant and extinct late‐Quaternary mammal species. We find island mammal assem...
Background
Species with direct uses, such as sources of food, shelter, building material and medicine tend to have more specific local names. But could the same apply for species that people fear?
Methods
To address this question, here we explore the behavior and perception of species diversity and dangerousness through a survey of 1037 households...
Human impacts reshape ecological communities through the extinction and introduction of species. The combined impact of these factors depends on whether non-native species fill the functional roles of extinct species, thus buffering the loss of functional diversity. This question has been difficult to address, because comprehensive information abou...
Aim
Different fruit colours are associated with dispersal by different frugivores, largely based on colour vision type. Frugivore mobility affects overall range size for the plant being dispersed. Here we determine the interaction between different fruit colours, range sizes, and diversification rates by testing two hypotheses: That (1) fruit colou...
Aim
Leaves display a remarkable variety of shapes, each with potential ecological advantages in certain climates. Studies correlating leaf shape with either climate or height constraints have focused on intraspecific variation, while the macroecological drivers of shape remain poorly known. Here, we determine associations between climate and plant...
Motivation
Body mass is one of the most important determinants of animal ecology. Unlike other important traits it is also readily inferable from fossils and it is therefore one of the only traits that can be directly analysed and compared between fossil and contemporary communities. Despite this, no comprehensive database of the body mass of large...
Aim
Cross‐taxonomic congruence in biodiversity patterns is key to understanding the main drivers of community structure, for biogeographical regionalization and to guide conservation. We aim to map the patterns of phylogenetic turnover and disentangle the geographical and environmental factors that drive the phylogenetic composition of distinct fau...
Conservation efforts should target the few remaining areas of the world that represent outstanding examples of ecological integrity and aim to restore ecological integrity to a much broader area of the world with intact habitat and minimal species loss while this is still possible. There have been many assessments of “intactness” in recent years bu...
Motivation
A species’ diet is central to understanding many aspects of its biology, including its behaviour, movement, and ecological niche. The diets of terrestrial carnivorous mammals, defined here as species primarily consuming other mammals (hereafter, mammal‐consumers), have been extensively studied and can vary in the proportion of different...
Habitat suitability estimated with probability of occurrence in species distribution models (SDMs) is used in conservation to identify geographic areas that are most likely to harbor individuals of interest. In theory, probability of occurrence is coupled with individual fitness so that individuals have higher fitness at the centre of their species...
A reliable identification and delimitation of species is an essential pre-requisite for many fields of science and conservation. The Neotropical herpetofauna is the world’s most diverse, including many taxa of uncertain or debated taxonomy. Here we tackle one such species complex, by evaluating the taxonomic status of species currently allocated in...
Species distribution data are fundamental to the understanding of biodiversity patterns and processes. Yet, such data are strongly affected by sampling biases, mostly related to site accessibility. The understanding of these biases is therefore crucial in systematics, biogeography and conservation. Here we present a novel approach for quantifying s...
Human-driven extinctions can affect our understanding of evolution, through the nonrandom loss of certain types of species. Here, we explore how knowledge of a major evolutionary transition—the evolution of flightlessness in birds—is biased by anthropogenic extinctions. Adding data on 581 known anthropogenic extinctions to the extant global avifaun...
The ongoing environmental crisis poses an urgent need to forecast the who, where and when of future species extinctions, as such information is crucial for targeting conservation efforts. Commonly, such forecasts are made based on conservation status assessments produced by the International Union for Conservation of Nature (IUCN). However, when re...
Significance
The biological interchange between North and South America associated with the formation of the Isthmus of Panama is key to defining current gradients of species diversity. A major gap in our understanding of the interchange is its asymmetry, where mammals of North American origin attained higher diversity in South America than vice ve...
Herbivorous mammals are important for natural ecosystems even today, but how much stronger would there effects be without human-linked extinctions and extirpations? The ranges of many mammal species have contracted and numerous species have gone extinct due to human pressures, so herbivore impacts in even seemingly natural ecosystems likely deviate...
To understand the current biodiversity crisis, it is crucial to determine how humans have affected biodiversity in the past. However, the extent of human involvement in species extinctions from the Late Pleistocene onward remains contentious. Here, we apply Bayesian models to the fossil record to estimate how mammalian extinction rates have changed...
Aim
Effective policymaking for biological conservation requires the identification and ranking of the most important areas for protection or management. One of the most frequently used systems for selecting priority areas is the Key Biodiversity Areas (hereafter KBAs), developed by the International Union for Conservation of Nature (IUCN). However,...
Areas of endemism are important in biogeography because they capture facets of biodiversity not represented elsewhere. However, the scales at which they are relevant to research and conservation are poorly analysed. Here, we calculate weighted endemism (WE) and phylogenetic endemism (PE) separately for all birds and amphibians across the globe. We...
The Late Quaternary extinctions of megafauna (defined as animal species > 44.5 kg) reduced the dispersal of seeds and nutrients, and likely also microbes and parasites. Here we use body‐mass based scaling and range maps for extinct and extant mammal species to show that these extinctions led to an almost seven‐fold reduction in the movement of gut‐...
Maps of the human footprint allow ecologists to identify the wildest lands on the planet, track their decline, and prioritize wildland conservation efforts. Other research efforts have mapped biological intactness and identified conservation priorities to protect biodiversity. However, little research has involved the use of historical references t...
Covering ancient geomorphological landscapes, and surrounded by some of the most diverse forests on Earth, the Neotropical savannas were once perceived by naturalists as ancient environments. However, current evidence suggests that tropical forests have existed in the Neotropics since the Paleocene, whereas most plant lineages present in South Amer...
Concern for megafauna is increasing among scientists and non-scientists. Many studies have emphasized that megafauna play prominent ecological roles and provide important ecosystem services to humanity. But, what precisely are ‘megafauna’? Here, we critically assess the concept of megafauna and propose a goal-oriented framework for megafaunal resea...
Natural history museums are unique spaces for interdisciplinary research and educational innovation. Through extensive exhibits and public programming and by hosting rich communities of amateurs, students, and researchers at all stages of their careers, they can provide a place-based window to focus on integration of science and discovery, as well...
Large-bodied mammalian herbivores can influence processes that exacerbate or mitigate climate change. Herbivore impacts are, in turn, influenced by predators that place top-down forcing on prey species within a given body size range. Here, we explore how the functional composition of terrestrial large-herbivore and -carnivore guilds varies between...
The Late Quaternary extinctions of megafauna (defined as animal species >44.5 kg) reduced the dispersal of seeds and nutrients, and likely also microbes and parasites. Here we use body-mass based scaling and range maps for extinct and extant mammal species to show that these extinctions led to an almost seven-fold reduction in the movement of gut-t...
Aim
In order to implement effective conservation policies, it is crucial to know how biodiversity is distributed and one of the most widely used systems is the Key Biodiversity Areas (hereafter KBA) criteria, developed by the International Union for Conservation of Nature (IUCN). Here we develop a tool to rank Key Biodiversity Areas in a continuous...
While the anthropogenic impact on ecosystems today is evident, it remains unclear if the detrimental effect of hominins on co‐occurring biodiversity is a recent phenomenon or has also been the pattern for earlier hominin species. We test this using the East African carnivore fossil record. We analyse the diversity of carnivores over the last four m...
The ongoing environmental crisis poses an urgent need to forecast the who , where , and when of future species extinctions, as such information is crucial for targeting conservation efforts. Commonly, such forecasts are made based on conservation status assessments produced by the International Union for Conservation of Nature (IUCN). However, when...
Most knowledge on biodiversity derives from the study of charismatic macro-organisms, such as birds and trees. However, the diversity of micro-organisms constitutes the majority of all life forms on Earth. Here, we ask if the patterns of richness inferred for macro-organisms are similar for micro-organisms. For this, we barcoded samples of soil, li...
Analyses of museum specimens can help illuminate temporal changes in wildlife genetics and distributions, and the objective of our study was to evaluate the suitability of skin samples from the past century for genomic analyses. We examined two European species with extensive genomic resources and existing data: the wild boar (Sus scrofa) and the w...
Factors driving the spatial configuration of centres of endemism have long been a topic of broad interest and debate. Due to different eco‐evolutionary processes, these highly biodiverse areas may harbour different amounts of ancient and recently diverged organisms (paleo‐ and neo‐endemism, respectively). Patterns of endemism still need to be measu...
Many mechanisms have been hypothesized to explain Bergmanns rule - the correlation of body size with latitude. However, it is not feasible to assess the contribution of hypothesised mechanisms by experimental manipulation or statistical correlation. Here, we evaluate two of the principal hypothesised mechanisms, related to thermoregulation and reso...
Understanding why some clades contain more species than others is a major challenge in evolutionary biology, and variation in dispersal ability and its connection to diversification rate may be part of the explanation. Several studies have suggested a negative relationship between dispersal capacity and diversification rate among living mammals. Ho...
Natural history museums are unique spaces for interdisciplinary research and for educational innovation. Through extensive exhibits and public programming and by hosting rich communities of amateurs, students, and researchers at all stages of their careers, they provide a place-based window to focus on integration of science and discovery, as well...
Natural history museums are unique spaces for interdisciplinary research and for educational innovation. Through extensive exhibits and public programming and by hosting rich communities of amateurs, students, and researchers at all stages of their careers, they provide a place-based window to focus on integration of science and discovery, as well...
Background and aims:
Identifying the processes that generate and maintain biodiversity requires understanding of how evolutionary processes interact with abiotic conditions to structure communities. Edaphic gradients are strongly associated with floristic patterns but, compared with climatic gradients, have received relatively little attention. We...
Significance
Biodiversity is more than the number of species on Earth. It is also the amount of unique evolutionary history in the tree of life. We find that losses of this phylogenetic diversity (PD) are disproportionally large in mammals compared with the number of species that have recently gone extinct. This lost PD can only be restored with ti...
The unparalleled biodiversity found in the American tropics (the Neotropics) has attracted the attention of naturalists for centuries. Despite major advances in recent years in our understanding of the origin and diversification of many Neotropical taxa and biotic regions, many questions remain to be answered. Additional biological and geological d...
Aim
To identify which factors distinguish ecologically successful mammalian clades (i.e., clades with a large combined range size) from less successful ones.
Location
Global.
Methods
We estimated the total range sizes for each individual mammalian subfamily and used phylogenetic regressions to identify the relative importance of factors related t...
Data needed for macroecological analyses are difficult to compile and often hidden away in supplementary material under non-standardized formats. Phylogenies, range data, and trait data often use conflicting taxonomies and require ad hoc decisions to synonymize species or fill in large amounts of missing data. Furthermore, most available data sets...
Past global change may have forced animal-dispersed plants with megafaunal fruits to adapt or go extinct, but these processes have remained unexplored at broad spatio-temporal scales. Here, we combine phylogenetic, distributional and fruit size data for more than 2500 palm (Arecaceae) species in a time-slice diversification analysis to quantify how...