Shah Md Tamim Kabir

Shah Md Tamim Kabir
Verified
Shah verified their affiliation via an institutional email.
Verified
Shah verified their affiliation via an institutional email.
  • Doctor of Philosophy
  • PhD Student at University of East Anglia

Evolution Analysis of Dimethylsulphopropionate (DMSP) Synthesis Genes and Their Role in Stress Tolerance in Higher Plant

About

17
Publications
4,212
Reads
How we measure 'reads'
A 'read' is counted each time someone views a publication summary (such as the title, abstract, and list of authors), clicks on a figure, or views or downloads the full-text. Learn more
232
Citations
Current institution
University of East Anglia
Current position
  • PhD Student
Additional affiliations
January 2013 - present
Bangladesh Jute Research Institute
Position
  • Bioinformatician
Education
January 2016 - December 2017
University of Development Alternative
Field of study
  • Biotechnology and Genetic Engineering
March 2007 - November 2011
Khulna University
Field of study
  • Biotechnology and Genetic Engineering

Publications

Publications (17)
Article
Full-text available
The organosulfur compound dimethylsulfoniopropionate (DMSP) has key roles in stress protection, global carbon and sulfur cycling, chemotaxis, and is a major source of climate-active gases. Saltmarshes are global hotspots for DMSP cycling due to Spartina cordgrasses that produce exceptionally high concentrations of DMSP. Here, in Spartina anglica, w...
Article
Full-text available
Jute, eco-friendly natural fiber, depends on conventional water-based microbial retting process that suffers from the production of low-quality fiber, restricting its diversified applications. The efficiency of water retting of jute depends on plant polysaccharide fermenting pectinolytic microorganisms. Understanding the phase difference in retting...
Article
Full-text available
Jute, eco-friendly natural fiber, depends on conventional water-based microbial retting process that suffers from the production of low-quality fiber, restricting its diversified applications. The efficiency of water retting of jute depends on plant polysaccharide fermenting pectinolytic microorganisms. Understanding the phase difference in retting...
Article
Farmers prefer dark jute (Corchorus olitorius var. O-9897) to white jute (Corchorus capsularis var. CVL-1) because dark jute produces more bast fiber and has greater fiber strength. Crossing incompatibility between these two jute species is the main genetic barrier to transfer waterlogging-tolerant capability from white jute to dark jute. So, to de...
Article
The ethylene-responsive element (AP2/ERF) is one of the keys and conserved transcription factors (TF) in plants that play a vital role in regulating plant growth, development and stress response. A total of 119 CoAP2/ERF genes were identified from the dark jute genome, one of the most important bast fibre crops. Among these, 17 were AP2, 97 ERF, 4...
Article
Full-text available
Background Although it is becoming evident that individual’s immune system has a decisive influence on SARS-CoV-2 disease progression, pathogenesis is largely unknown. In this study, we aimed to profile the host transcriptome of COVID-19 patients from nasopharyngeal samples along with virus genomic features isolated from respective host, and a comp...
Article
Full-text available
The demand for products made by jute fiber is increasing day-by-day for its biodegradable nature regarding environmental concerns. To gain this opportunity correctly, the development of high yielding and improved fiber quality jute variety is essential for ensuring diversified use of jute fiber. The major developed jute varieties, so far, are the o...
Article
Full-text available
2020). Genome wide analysis and expression profiling of hydroxycinnamoyl coa: shikimate hydroxycinnamoyl transferase (HCT) in jute (Corchorus olitorius). Int. J. Bus. Soc. Sci. Res. 8(3): 91-97. Retrieve from Abstract Lignin is one of the major components of jute fiber, which significantly affects fiber quality as it causing fiber rigidity during s...
Preprint
As the COVID-19 pandemic progresses, fatality and cases of new infections are alsoincreasing at an alarming rate. SARS-CoV-2 follows a highly variable course and it is becoming more evident that individual's immune system has a decisive influence on the progression of the disease. However, the detailed underlying molecular mechanisms of the SARS-Co...
Article
Full-text available
Background: Gibberellin (GA) is one of the most essential phytohormones that modulate plant growth and development. Jute (Corchorus sp.) is the second most important source of bast fiber. Our result has shown that exogenous GA can positively regulate jute height and related characteristics which mean increasing endogenous GA production will help t...
Article
Full-text available
Jute fibre is the second most important fibre next to cotton. It is obtained from the bark of plant through microbial retting process. Here we report optimized microbial retting protocol that can lower retting period and produce high fibre quality. A total of 451 bacterial colonies have been isolated from five jute retting water samples in Banglade...
Article
Full-text available
Jute (Corchorus sp.) is one of the most important sources of natural fibre, covering ∼80% of global bast fibre production1. Only Corchorus olitorius and Corchorus capsularis are commercially cultivated, though there are more than 100 Corchorus species2 in the Malvaceae family. Here we describe highquality draft genomes of these two species and thei...
Article
New insights to understand the dynamics of enormous modifications during cancer in comparison to healthy condition have made the ground for the emergence of sophisticated systemic approaches like Network Systems Biology in the twenty first century which is potentially effective to model different biological phenomena such as regulation of gene-expr...
Article
Full-text available
Amoora cucullata (amur), a member of Meliaceae family is a typical mangrove tree and traditionally used as a therapeutic agent to treat diarrhoea and inflammation like diseases. In order to find out the aqscientific basis of such uses, the present study was undertaken to determine the cytotoxic potential of this plant. Brine shrimp lethality assay...

Network

Cited By