Samuel Pironon

• PhD
• Research Leader at Royal Botanic Gardens, Kew

Climate change is expected to severely impact cultivated plants and consequently human livelihoods1–3, especially in sub-Saharan Africa (SSA)4–6. Increasing agricultural plant diversity (agrobiodiversity) could overcome this global challenge7–9 given more information on the climatic tolerance of crops and their wild relatives. Using >200,000 worldw...

Agricultural systems are vulnerable to climate change, and global reservoirs of plant genetic diversity are proving to be a valuable means of crop adaptation. A study now shows that production of sweet potato is at risk from extreme heat events, but a few tolerant cultivars can still thrive and potentially provide climate resilience.

Species distribution models (SDMs) are widely used in ecology. In theory, SDMs capture (at least part of) species' ecological niches and can be used to make inferences about the distribution of suitable habitat for species of interest. Because habitat suitability is expected to influence population demography, SDMs have been used to estimate a vari...

With more than two billion people suffering from malnutrition and diets homogenizing globally, it is vital to identify and conserve nutrient-rich species that may contribute to improving food security and diversifying diets. Of the approximately 390,000 vascular plant species known to science, thousands have been reported to be edible, yet their nu...

Plants sustain human life. Understanding geographic patterns of the diversity of species used by people is thus essential for the sustainable management of plant resources. Here, we investigate the global distribution of 35,687 utilized plant species spanning 10 use categories (e.g., food, medicine, material). Our findings indicate general concorda...

Societal Impact Statement Biological samples and their associated information are an essential resource used by scientists, governments, policymakers, practitioners and communities to ensure that biodiversity can be appropriately protected and sustainably used. Yet, considering the enormous task of documenting the vast numbers of as‐yet‐unknown pla...

The global biodiversity crisis in agriculture is overlooked compared with that in wild systems. This must change if we are to safeguard domesticated plant diversity and meet global sustainable development and biodiversity goals. In this Perspective, we review tools developed through decades of wild biodiversity conservation and provide a framework...

The global biodiversity crisis in agriculture is overlooked compared with that in wild systems. This must change if we are to safeguard domesticated plant diversity and meet global sustainable development and biodiversity goals. In this Perspective, we review tools developed through decades of wild biodiversity conservation and provide a framework...

More than 15% of all vascular plant species may remain scientifically undescribed, and many of the > 350 000 described species have no or few geographic records documenting their distribution. Identifying and understanding taxonomic and geographic knowledge shortfalls is key to prioritising future collection and conservation efforts. Using extensiv...

Angiosperms with large genomes experience nuclear‐, cellular‐, and organism‐level constraints that may limit their phenotypic plasticity and ecological niche, which could increase their risk of extinction. Therefore, we test the hypotheses that large‐genomed species are more likely to be threatened with extinction than those with small genomes, and...

Angiosperms, which inhabit diverse environments across all continents, exhibit significant variation in genome sizes, making them an excellent model system for examining hypotheses about the global distribution of genome size. These include the previously proposed large genome constraint, mutational hazard, polyploidy‐mediated, and climate‐mediated...

What grows where? Knowledge about where to find particular species in nature must have been key to the survival of humans throughout our evolution. Over time, and as people colonised new land masses and habitats, interactions with the local biota led to a wealth of combined traditional and scientific wisdom about the distributions of species and th...

More than 15% of all vascular plant species may remain scientifically undescribed, and many of the >340,000 described species have no or few geographic records documenting their distribution. Identifying and understanding taxonomic and geographic knowledge shortfalls is key to prioritising future collection and conservation efforts. Using extensive...

Angiosperms with large genomes experience nuclear-, cellular- and organism-level constraints that may limit their phenotypic plasticity and ecological niche. These constraints have been documented to vary across lineages, life-history strategies, ecogeographic patterns and environmental conditions. Therefore, we test the hypotheses that extinction...

1) Angiosperms, which inhabit diverse environments across all continents, exhibit significant variation in genome sizes, making them an excellent model system for examining hypotheses about the global distribution of genome size. These include the previously proposed large-genome-constraint, mutational-hazard, polyploidy-mediated, and climate-media...

Societal Impact Statement The global success and expansion of a small pool of major crops, including rice, wheat and maize, risks homogenising global agriculture. Focusing on the agriculturally diverse Ethiopian Highlands, this study tested whether farm diversity tends to be lower among farmers who grow more introduced crops. Surprisingly, it was f...

Plants are a rich source of bioactive compounds and a number of plant-derived antiplasmodial compounds have been developed into pharmaceutical drugs for the prevention and treatment of malaria, a major public health challenge. However, identifying plants with antiplasmodial potential can be time-consuming and costly. One approach for selecting plan...

Invasion of the malaria vector Anopheles stephensi across the Horn of Africa threatens control efforts across the continent, particularly in urban settings where the vector is able to proliferate. Malaria transmission is primarily determined by the abundance of dominant vectors, which often varies seasonally with rainfall. However, it remains uncle...

Madagascar's biota is hyperdiverse and includes exceptional levels of endemicity. We review the current state of knowledge on Madagascar's past and current terrestrial and freshwater biodiversity by compiling and presenting comprehensive data on species diversity, endemism, and rates of species description and human uses, in addition to presenting...

Madagascar's unique biota is heavily affected by human activity and is under intense threat. Here, we review the current state of knowledge on the conservation status of Madagascar's terrestrial and freshwater biodiversity by presenting data and analyses on documented and predicted species-level conservation statuses, the most prevalent and relevan...

Invasion of the malaria vector Anopheles stephensi across the Horn of Africa threatens control efforts across the continent, particularly in urban settings where the vector is able to proliferate. Malaria transmission across Africa is primarily determined by the abundance of dominant vectors, which often varies seasonally with rainfall. However, it...

Over the course of history, humans have moved crops from their regions of origin to new locations across the world. The social, cultural and economic drivers of these movements have generated differences not only between current distributions of crops and their climatic origins, but also between crop distributions and climate suitability for their...

Protecting nature’s contributions to people requires accelerating extinction risk assessment and better integrating evolutionary, functional and used diversity with conservation planning. Here, we report machine learning extinction risk predictions for 1,381 palm species (Arecaceae), a plant family of high socio-economic and ecological importance....

Understanding the temporal dynamics of mosquito populations underlying vector-borne disease transmission is key to optimizing control strategies. Many questions remain surrounding the drivers of these dynamics and how they vary between species—questions rarely answerable from individual entomological studies (that typically focus on a single locati...

We can increase the stability of our food systems against environmental variability and climate change by following the footsteps of our ancestors and domesticating edible wild plants. Reinforced by recent advances in comparative genomics and gene editing technologies, neodomestication opens possibilities for a rapid generation of new crops. By sta...

Crop diversity plays a major role in underpinning food security. It is especially important to smallholder and subsistence farmers, who often rely on crop diversity for stable and resilient production. Despite this, global expansion of a small pool of major crops and the associated homogenisation of global agricultural systems may decrease on-farm...

Aim Mountains shelter high biological diversity and constitute both important barriers and confluence areas for species. They often contain species whose populations occur at their range limit (peripheral species), which according to the “Centre‐Periphery” hypothesis (CPH) are expected to occur in marginal environments, exhibit low abundance and co...

Understanding the factors driving ecological and evolutionary interactions of economically important plant species is important for agricultural sustainability. The geography of crop wild relatives, including wild potatoes (Solanum section Petota), have received attention; however, such information has not been analysed in combination with phylogen...

Food production strategies and patterns are being altered in response to climate change. Enhancing the adaptation of important food crops to novel climate regimes will be critical to maintaining world food supplies. Climate change is altering the suitability of production areas for crops such as potato (Solanum tuberosum L.) making future productiv...

Despite substantial growth in global agricultural production, food and nutritional insecurity is rising in Sub-Saharan Africa. Identification of underutilised indigenous crops with useful food security traits may provide part of the solution. Enset (Ensete ventricosum) is a perennial banana relative with cultivation restricted to southwestern Ethio...

Social Impact Statement Climate change is expected to disproportionately affect sub‐Saharan Africa in the next century, posing a threat to the livelihoods of smallholder farmers and deepening food insecurity. To adapt to this threat, more climate‐resilient crops need to be brought into the food system; these may be developed through breeding with c...

There is a pressing need to conserve plant diversity to prevent extinctions and to enable sustainable use of plant material by current and future generations. Here, we review the contribution that living collections and seed banks based in botanic gardens around the world make to wild plant conservation and to tackling global challenges. We focus i...

To meet the ambitious objectives of biodiversity and climate conventions, the international community requires clarity on how these objectives can be operationalized spatially and how multiple targets can be pursued concurrently. To support goal setting and the implementation of international strategies and action plans, spatial guidance is needed...

We report odd records in the southernmost range of the Tumbes Tyrant (Tumbezia salvini), a near-threatened species endemic of the Tumbesian region in Peru. We assessed whether these records could be considered geographically or ecologically marginal compared to the entire species distribution. By collecting occurrence records for the species and cl...

Despite substantial growth in global agricultural production, food and nutritional insecurity is rising in Sub-Saharan Africa. Identification of underutilised indigenous crops with useful food security traits may provide part of the solution. Enset (Ensete ventricosum) is a perennial banana relative with cultivation restricted to southwestern Ethio...

The selection of new crops and the migration of crop areas are two key strategies for agriculture to cope with climate change and ensure food security in the coming years. However, both rely on the assumption that climate is a major factor determining crop distributions worldwide. Here, we show that the current global distributions of nine of twelv...

The selection of new crops and the migration of crop areas are two key strategies for agriculture to cope with climate change and ensure food security in the coming years. However, both rely on the assumption that climate is a major factor determining crop distributions worldwide. Here, we show that the current global distributions of nine of twelv...

Phytosterols are primary plant metabolites that have fundamental structural and regulatory functions. They are also essential nutrients for phytophagous insects, including pollinators, that cannot synthesize sterols. Despite the well‐described composition and diversity in vegetative plant tissues, few studies have examined phytosterol diversity in...

Understanding the temporal dynamics (including the start, duration and end) of malaria transmission is key to optimising various control strategies, enabling interventions to be deployed at times when they can have the most impact. This temporal profile of malaria risk is intimately related to the dynamics of the mosquito populations underlying tra...

Phytosterols are primary plant metabolites that have fundamental structural and regulatory functions. They are also essential nutrients for phytophagous insects, including pollinators, that cannot synthesize sterols. Despite the well-described composition and diversity in vegetative plant tissues, few studies have examined phytosterol diversity in...

Never before has the biosphere, the thin layer of life we call home, been under such intensive and urgent threat. Deforestation rates have soared as we have cleared land to feed ever-more people, global emissions are disrupting the climate system, new pathogens threaten our crops and our health, illegal trade has eradicated entire plant populations...

Societal Impact Statement Biodiversity is essential to food security and nutrition locally and globally. By reviewing the global state of edible plants and highlighting key neglected and underutilized species (NUS), we attempt to unlock plant food resources and explore the role of fungi, which along with the wealth of traditional knowledge about th...

Societal Impact Statement Bioenergy is a major component of the global transition to renewable energy technologies. The plant and fungal kingdoms offer great potential but remain mostly untapped. Their increased use could contribute to the renewable energy transition and addressing the United Nations Sustainable Development Goal 7 “Ensure access to...

Kew’s State of the World’s Plants and Fungi project provides assessments of our current knowledge of the diversity of plants and fungi on Earth, the global threats that they face, and the policies to safeguard them. Produced in conjunction with an international scientific symposium, Kew’s State of the World’s Plants and Fungi sets an important inte...

Significance In 2012, an unusual outbreak of malaria occurred in Djibouti City followed by increasingly severe annual outbreaks. Investigations revealed the presence of an Asian mosquito species; Anopheles stephensi , which thrives in urban environments. An. stephensi has since been identified in Ethiopia and Sudan. By combining data for An. stephe...

Understanding the role of biotic and abiotic factors that drive ecological and evolutionary interactions of economically important plant species is key for sustainability. Wild potatoes (Solanum section Petota), given their global importance for food security and the large amount of diversity, were chosen as a model system to better understand thes...

Bioenergy is a major component of the global transition to renewable energy technologies. The plant and fungal kingdoms offer great potential but remain mostly untapped. Their increased use could contribute to the renewable energy transition and addressing the United Nations Sustainable Development Goal 7 “Ensure access to affordable, reliable, sus...

Global biodiversity hotspots are areas containing high levels of species richness, endemism and threat. Similarly, regions of agriculturally relevant diversity have been identified where many domesticated plants and animals originated, and co-occurred with their wild ancestors and relatives. The agro-biodiversity in these regions has, likewise, oft...

Plants are essential to human wellbeing, supporting important ecosystem services that are critical components of Natural Capital. They supply food, medicine, fibre, fuel and building materials, and provide a broad spectrum of benefits to society, offering vital solutions to some of the world’s major challenges, including bioenergy, human and animal...

paragraph To meet the ambitious objectives of biodiversity and climate conventions, countries and the international community require clarity on how these objectives can be operationalized spatially, and multiple targets be pursued concurrently ¹ . To support governments and political conventions, spatial guidance is needed to identify which areas...

Species abundance is expected to decrease from the centre towards the edge of their ecological niches (abundant niche-centre hypothesis). Recently, Osorio-Olvera et al . (2020) reported strong support for the abundant niche-centre relationship in North American birds. We demonstrate here that methodological decisions strongly affected perceived sup...

The most common approach to predicting how species ranges and ecological functions will shift with climate change is to construct correlative species distribution models (SDMs). These models use a species’ climatic distribution to determine currently suitable areas for the species and project its potential distribution under future climate scenario...

Aim Phylogeography of fruit trees is challenging due to recurrent exchanges between domesticated and wild populations. Here we tested the eastern refugium hypothesis (ERH) for the carob tree, Ceratonia siliqua , which supports its natural and domestication origins in the eastern Mediterranean and a feral origin in the west. Location Mediterranean...

More than 31,000 useful plant species have been documented to fulfil needs and services for humans or the animals and environment we depend on. Despite this diversity, humans currently satisfy most requirements with surprisingly few plant species; for example, just three crops – rice, wheat and maize – comprise more than 50% of plant derived calori...

A new modeling toolbox allowing to perform Species Distribution Modelling by providing a user-friendly interface to the commonly used R package biomod2 via the R library shiny. The tool combines the powerful statistical modeling framework developed within biomod2, with an appealing easy-to-use interface designed by shiny in order to investigate the...

Climatically induced local species extinctions may trigger coextinction cascades, thus driving many more species to extinction than originally predicted by species distribution models. Using seven pollination networks across Europe that include the phylogeny and life history traits of plants, we show a substantial variability across networks in cli...

Aim We investigated the phylogeographical history of a clonal‐sexual orchid, to test the hypothesis that current patterns of genetic diversity and differentiation retain the traces of climatic fluctuations and of the species reproductive system. Location Europe, Siberia and Russian Far East. Taxon Cypripedium calceolus L. (Orchidaceae). Methods...

Santini L., Pironon S., Maiorano L., Thuiller W. , 2018. Addressing common pitfalls does not provide more support to geographical and ecological abundant-centre hypotheses. Ecography 42: 1–10

Sunflower is a unique model species for assessing crop responses and adaptation to climate change. We provide an initial assessment of how climate change may influence the abiotic and biotic environment of cultivated sunflower across the world. We find an 8% shift between current and future climate space in cultivated sunflower locations globally,...

A long‐standing hypothesis in biogeography is that a species’ abundance is highest at the centre of its geographical or environmental space and decreases toward the edges. Several studies tested this hypothesis and provided mixed results and overall weak support to the theory. Most studies, however, are affected by several limitations related to th...

Biotic stressors such as hemiparasites have a profound impact on forest functioning. However, predicting the future incidence of these stressors on forests remains challenging because climate‐based distribution does not consider tree–hemiparasite interactions or the impacts of extreme climate events on stressors’ performance. We use species distrib...

Hutchinson (1957) defined the ecological niche as a hypervolume shaped by the environmental conditions under which a species can “exist indefinitely”. Although several authors further discussed the need to adopt a demographic perspective of the ecological niche theory, very few have investigated the environmental requirements of different component...

The ‘centre–periphery hypothesis’ (CPH) is a long-standing postulate in ecology that states that genetic variation and demographic performance of a species decrease from the centre to the edge of its geographic range. This hypothesis is based on an assumed concordance between geographical peripherality and ecological marginality such that environme...

Premise of research. Comparative studies of variation in the ecology and genetics of natural plant populations located at the limits and in the center of a species range provide fundamental insights into the historical formation of species distribution patterns. Methodology. In this study, we quantify variation in the ecological niche and the expre...

Aim The ‘centre–periphery hypothesis’ ( CPH ) predicts that species performance (genetics, physiology, morphology, demography) will decline gradually from the centre towards the periphery of the geographic range. This hypothesis has been subjected to continuous debate since the 1980s, essentially because empirical studies have shown contrasting pat...

Conservation planning exercises increasingly rely on species distributions predicted either from one particular statistical model or, more recently, from an ensemble of models (i.e. ensemble forecasting). However, it has not yet been explored how different ways of summarizing ensemble predictions affect conservation planning outcomes. We evaluate t...

Both climate change and habitat modification exert serious pressure on biodiversity. Although climate change mitigation has been identified as an important strategy for biodiversity conservation, bioenergy remains a controversial mitigation action due to its potential negative ecological and socio-economic impacts which arise through habitat modifi...

Despite the recognized joint impact of climate and land cover change on facets of biodiversity and their associated functions, risk assessments have primarily evaluated impacts on species ranges and richness. Here we quantify the sensitivity of the functional structure of European avian assemblages to changes in both regional climate and land cover...

En diciembre de 2012, se celebraron las primeras Jornadas IPErinas, reunión que permitió compartir al personal del Instituto Pirenaico de Ecología (CSIC), muchos de los trabajos de investigación que actualmente se están llevando a cabo por los distintos grupos del centro. Estas Jornadas surgieron de la necesidad de compartir y difundir los principa...