Renata Veroneze

Renata Veroneze
  • PhD
  • Professor (Assistant) at Federal University of Viçosa

About

106
Publications
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Introduction
Renata Veroneze currently works at the Department of Animal Science, Universidade Federal de Viçosa (UFV). Renata does research in Animal Science, Genomic prediction and Genetic Evaluation.
Current institution
Federal University of Viçosa
Current position
  • Professor (Assistant)

Publications

Publications (106)
Article
Full-text available
Pig production is an agricultural sector of great economic and social relevance to Brazil and global markets. Feed efficiency traits directly influence the sustainability of pig production due to the economic impact of feed costs on the production system and the environmental footprint of the industry. Therefore, breeding for improved feed efficien...
Article
Full-text available
This research aimed to compare statistical methods (random forest, RIDGE, LASSO, and elastic net regression) for the prediction of body weight in purebred and crossbred pigs reared in Brazil. This prediction was based on dorsal-view images obtained from video image processing. The study involved 69 animals belonging to breeds such as Large White, P...
Article
Genes with important roles in reproduction traits have been described in pig X-chromosome (SSCX), which may contribute considerably to genetic variance and could impact the accuracy of genomic prediction. The phenotypic data set includes information on 82,580 litter size records from 34,346 sows. Additionally, there were 108,006 in the pedigree, an...
Article
Full-text available
The exact accuracy of estimated breeding values can be calculated based on the prediction error variances obtained from the diagonal of the inverse of the left-hand side (LHS) of the mixed model equations (MME). However, inverting the LHS is not computationally feasible for large datasets, especially if genomic information is available. Thus, diffe...
Article
Full-text available
Background Heat stress (HS) poses significant threats to the sustainability of livestock production. Genetically improving heat tolerance could enhance animal welfare and minimize production losses during HS events. Measuring phenotypic indicators of HS response and understanding their genetic background are crucial steps to optimize breeding schem...
Article
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Background Non-additive genetic effects are often ignored in livestock genetic evaluations. However, fitting them in the models could improve the accuracy of genomic breeding values. Furthermore, non-additive genetic effects contribute to heterosis, which could be optimized through mating designs. Traits related to fitness and adaptation, such as h...
Article
Feed efficiency plays a major role in the overall profitability and sustainability of the beef cattle industry, as it is directly related to the reduction of the animal demand for input and methane emissions. Traditionally, the average daily feed intake and weight gain are used to calculate feed efficiency traits. However, feed efficiency traits ca...
Article
For decades, inbreeding in cattle has been evaluated using pedigree information. Nowadays, inbreeding coefficients can be obtained using genomic information such as runs of homozygosity (ROH). The aims of this study were to quantify ROH and heterozygosity-rich regions (HRR) in a subpopulation of Guzerá dual-purpose cattle, to examine ROH and HRR is...
Article
Full-text available
Simple Summary Some of the compounds involved in sexual steroids’ metabolic pathways (i.e., androstenone, indole, and skatole) might accumulate in the adipose tissue of intact male pigs after sexual maturity, resulting in boar taint (BT). With a perspective future ban on surgical castration, in pig population where early slaughtering is not a viabl...
Article
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This study aimed to propose and compare metrics of accuracy and bias of genomic prediction of breeding values for traits with censored data. Genotypic and censored-phenotypic information were simulated for four traits with QTL heritability and polygenic heritability, respectively: C1: 0.07-0.07, C2: 0.07-0.00, C3: 0.27-0.27, and C4: 0.27-0.00. Geno...
Article
Heat stress negatively affects livestock, with undesirable effects on animals' production and reproduction. Temperature and humidity index (THI) is a climatic variable used worldwide to study the effect of heat stress on farm animals. Temperature and humidity data can be obtained in Brazil through the National Institute of Meteorology (INMET), but...
Article
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This study aimed to investigate the feasibility of genomic prediction for productive and reproductive traits in Guzerá cattle using single-step genomic best linear unbiased prediction (ssGBLUP). Evaluations included the 305-day cumulative yields (first lactation, in kg) of milk, lactose, protein, fat, and total solids; adjusted body weight (kg) at...
Article
Full-text available
This study is aimed at estimating genetic parameters, effective population size, inbreeding, and inbreeding depression for birth weight, weaning weight, and average pre-weaning daily weight gain (ADG) in Piau pigs. We used information from 3841 Piau pigs, and four linear models were fitted in single-trait analyses, including or excluding maternal g...
Article
Full-text available
We aimed to reduce the dimensionality of quantitative traits in pigs applying factor analysis. Quantitative variables were collected, and the factor analysis extracted five factors with biological meaning related to performance, carcass quality, carcass yield, meat quality, and initial pH. These factors were posteriorly used as dependent variable t...
Article
Full-text available
This study evaluated the effects of dietary macauba pulp on the growth performance, carcass, and pork traits of growing-finishing pigs; and whether differences in residual feed intake breeding values could influence the pigs’ growth responses to macauba pulp inclusion in the diet. A total of 282 (34.8 ± 4.40 kg) pigs (barrows and females), progeny...
Article
Full-text available
Context Boar taint compounds (androstenone, skatole and indole) can be measured in pig carcasses, after slaughter or, alternatively, in biopsies of subcutaneous adipose tissue from selected living pigs. Measuring these compounds via biopsy enables data collection in selected animals and high standardisation regarding tissue-collection procedures fo...
Article
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We aimed to estimate genetic parameters for growth, reproductive, and carcass traits in Tabapuã cattle. Phenotypic data were collected between 1990 and 2019 in 1,218 farms, and the pedigree file had 340,868 animals. The traits evaluated were body weight at 120 (W120), 210 (W210), 365 (W365), and 550 (W550) days of age; age at first calving (AFC), s...
Article
Meat traceability and certification increase consumers’ confidence in making purchasing decisions. In Brazil, certified Angus beef follows specific regulation, which requires a minimum of 50% of Angus genome in its breed composition to be commercialized as certified Angus beef. Because the majority of the beef produced in Brazil is Nellore-based, t...
Preprint
Full-text available
This study aimed to investigate the feasibility of genomic prediction for productive and reproductive traits in Guzerá cattle using the single-step genomic BLUP (ssGBLUP). Evaluations included the 305-day cumulative yields (first lactation, in kg) of milk, lactose, protein, fat, and total solids; adjusted body weight (kg) at the ages of 450 days, 3...
Article
Full-text available
The aims of this study were to: (1) estimate genetic correlation for milk production traits (milk, fat and protein yields and fat and protein contents) and fatty acids (FA: C16:0, C18:1 cis -9, LCFA, SFA, and UFA) over days in milk, (2) investigate the performance of genomic predictions using single-step GBLUP (ssGBLUP) based on random regression m...
Article
We aimed to investigate the impacts of ruminal undegradable protein (RUP) enriched diet during late gestation on performance of pregnant beef cows and skeletal muscle growth of the offspring. From 180d of gestation to parturition, a total of 31 Brahman pregnant cows were randomly assigned to one of the experimental treatments: High-RUP diet (H-RUP,...
Article
Full-text available
Context Greater production of oocytes and embryos from Gir donors contributes to greater fertility and genetic progress. Aims This study aimed to obtain genetic parameters for oocyte and embryo production in the Gir breed. Methods Repeatability and random regression models were applied to data consisting of 17 526 Ovum Pick Up observations from 1...
Preprint
Full-text available
This study aimed to estimate genetic parameters, effective population size, inbreeding, and inbreeding depression for birth weight, weaning weight, and average pre-weaning daily weight gain (ADG) in Piau breed pigs. We used information from 3841 Piau pigs, and four linear models were fitted in single trait analyzes including or excluding maternal g...
Article
Full-text available
Simple Summary Due to forage seasonality, pregnant ruminants raised in pasture are commonly subjected to a period of feed restriction, which may lead to changes in the skeletal muscle metabolism of the offspring. Such alteration may have long-term consequences for the offspring’s performance and carcass composition. In the current study, we evaluat...
Article
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We investigated the use of different Legendre polynomial orders to estimate genetic parameters for milk production and fatty acid (FA) traits in the first lactation Walloon Holstein cows. The data set comprised 302,684 test‐day records of milk yield, fat and protein contents, and FAs generated by mid‐infrared (MIR) spectroscopy, C16:0 (palmitic aci...
Article
The weighted single-step genome-wide association study (WssGWAS) and post-GWAS analysis may be a useful tool to identify quantitative trait loci (QTL) and candidate genes linked to economically important phenotypes, such as boar taint in pigs. The boar taint is an unpleasant taste and smell observable at uncastrated pork cooking. Therefore, we aime...
Preprint
Full-text available
Objective: The aim of this study was to estimate genetic parameters for 305-day cumulative milk yield and components, growth, and reproductive traits in Guzerá cattle. Methods: The evaluated traits were 305-day first-lactation cumulative yields (kg) of milk (MY305), fat (FY305), protein (PY305), lactose (LY305), and total solids (SY305); age at fir...
Article
Full-text available
Objective: The aim of this study was to estimate genetic parameters for 305-day cumulative milk yield and components, growth, and reproductive traits in Guzerá cattle. Methods: The evaluated traits were 305-day first-lactation cumulative yields (kg) of milk (MY305), fat (FY305), protein (PY305), lactose (LY305), and total solids (SY305); age at fir...
Article
Full-text available
The study aimed at evaluating the effects of high ambient temperature (HT: 30 °C) on the thermoregulatory responses and performance of commercial and Piau crossbred (Brazilian Piau breed sires × commercial genotype dams) growing pigs. Commercial and Piau crossbred pigs were reared under thermoneutral (TN: 22 °C) or HT conditions during a 14-day exp...
Article
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In causal relationship studies, the latent variables may summarize the phenotypes in theoretical traits according to their phenotypic correlations, improving the understanding of causal relationships between broilers phenotypes. In this study, we aimed to investigate potential causal relationships among latent variables in broilers using a structur...
Article
Full-text available
Technological devices are increasingly present in livestock activities, such as identifying the reproductive status of cows. For this, predictive models must be accurate and usable in the productive context. The aims of this study were to evaluate estrus-associated changes in reticulo-rumen temperature (RRT) and activity (ACT) in Dairy Gyr heifers...
Conference Paper
Resumo: Neste estudo, objetivou-se avaliar como diferentes herdabilidades e arquiteturas genéticas das características afetam a acurácia de predição genômica dos animais cruzados a partir de informações das linhas puras. Foram simulados quinze diferentes cenários considerando diferentes herdabilidades total (poligênica + QTL): 0,50, 0,30 e 0,10; e...
Article
Full-text available
The level of genetic diversity in a population is inversely proportional to the linkage disequilibrium (LD) between individual single nucleotide polymorphisms (SNPs) and quantitative trait loci (QTLs), leading to lower predictive ability of genomic breeding values (GEBVs) in high genetically diverse populations. Haplotype-based predictions could ou...
Article
Full-text available
Simple Summary Greater metabolic needs in high-producing beef cattle might lead to mineral and vitamin deficiency. Previous studies have shown the benefits of B-vitamin and trace mineral supplementation in animal performance of ruminants; however, little is known about the effects of supplementing finishing beef cattle with rumen-protected forms on...
Article
The study of how different breeds adapt to heat stress and the further understanding of mechanisms underlying pigs thermotolerance is of utmost importance to attenuate the negative effects of heat stress on pigs welfare, physiology, and performance. Therefore, this study aimed at evaluating the effects of ambient temperature on performance and ther...
Article
Objetivamos estimar parâmetros genéticos para os parâmetros da curva de crescimento não-linear de Gompertz com base no método em duas etapas e em dados simulados de uma população de suínos. Dados de valores genéticos reais, dos parâmetros da curva de crescimento (a, b e k) e dos pesos corporais aos 1, 90, 210, 360 e 540 dias de idade foram simulado...
Article
Full-text available
1. Uniformity in animal products is an important aspect of the production system. Several studies have reported estimates of genetics on residual variance in different species, indicating that it could be exploited to improve uniformity by selection. Nevertheless, there are no reports about the possibilities of such a selection strategy in meat qua...
Article
Reproductive efficiency is major determinant of the dairy herd profitability. Thus, reproductive traits have been widely used as selection objectives in the current dairy cattle breeding programs. We aimed to evaluate strategies to model days open (DO), calving interval (CI), and daughter pregnancy rate (DPR) in Brazilian Holstein cattle. These rep...
Article
Positive interactions with humans can improve cow behavior and facilitate farm management, especially in dairy production systems in which milking occurs daily. Therefore, this study aimed to investigate the impact of positive tactile stimulation on behavior, and its effect on the milking routine, milk ejection, and milk yield of Gyr cows. Experime...
Article
Biological information regarding markers and gene association may be used to attribute different weights for single nucleotide polymorphism (SNP) in genome‐wide selection. Therefore, we aimed to evaluate the predictive ability and the bias of genomic prediction using models that allow SNP weighting in the genomic relationship matrix (G) building, w...
Article
Full-text available
The progenies of international bulls in diverse climatic conditions and management levels may lead to different expressions of their genetic potential resulting in a re-ranking of these bulls. Therefore, evaluate the presence of genotype by environment interaction (G × E) within and across countries is important to guide the decision-making on alte...
Article
Full-text available
Nucleotides are important to cell growth and division and are crucial to the rapid proliferation of such cells as the intestinal mucosa and immune cells. Accordingly, the nucleotide requirements of animals are high during periods of rapid growth and periods of stress like post-weaning period. Thus, nucleotide supplementation may be a possible alter...
Article
The profitability of dairy activity is influenced by the genetic selection of economically important traits. In this context, the correct estimation of genetic parameters and the knowledge regarding candidate genes involved in the expression of genetically associated traits may help develop appropriate breeding strategies for the Guzerá breed. In t...
Article
We investigated the applicability of ssGBLUP methodology under the autoregressive model (H‐AR) for genomic evaluation of longitudinal reproductive traits in Portuguese Holstein cattle. The genotype data of 1,230 bulls and 1,645 cows were considered in our study. The reproductive traits evaluated were interval from calving to first service (ICF), ca...
Article
Reproductive performance is one of the most important factors for the productive efficiency in beef cattle production. Biometric testicular and physical and morphological traits of the ejaculate are used to evaluate the reproductive performance of bulls. The phenotypic data of semen physical and morphological traits are expressed in percentage or n...
Conference Paper
Full-text available
Atendendo uma demanda global, os sistemas produtivos vêm cada vez mais sofrendo a automatização na cadeia produtiva. Dentre as tecnologias disponíveis atualmente a ‘Pecuária de Precisão’ vem ganhando espaço nas fazendas. O termo ‘Pecuária de Precisão’ se refere a várias tecnologias que possibilitam a coleta automatizada de dados buscando facilitar...
Article
Our aim was to evaluate the application of infrared thermography (IRT) to detect body surface temperature variation of body regions during the proestrus and estrus phases of the reproductive cycle of Gyr heifers and investigate environmental factors that could affect these measurements. Fifty-seven heifers were submitted to an ovulation synchroniza...
Article
This study focused on the identification of QTL regions, candidate genes, and network related genes based on the first 3 lactations (LAC3) of milk, fat, and protein yields, and somatic cell score (SCS) in Portuguese Holstein cattle. Additionally, the results were compared with those from only first lactation (LAC1) data. The analyses were performed...
Article
Full-text available
The objective with the present study was to evaluate the effect of guanidinoacetic acid (GAA) on the growth performance of nursery piglets as well as a possible molecular mechanism of action on lean mass gain. Seventy-two pigs, weaned at 21 d, weighing 6.80 ± 1.2 kg were distributed in a completely randomized design into one of three dietary treatm...
Article
Full-text available
As crossbreeding is extensively used in some livestock species, we aimed to evaluate the performance of single-step GBLUP (ssGBLUP) and weighted ssGBLUP (WssGBLUP) methods to predict Genomic Estimated Breeding Values (GEBVs) of crossbred animals. Different training population scenarios were evaluated: (SC1) ssGBLUP based on a single-trait model con...
Article
Scrotal circumference of bulls is correlated with pubertal age of female offspring. Hormonal control of reproductive function is similar in males and females, which may result in genetic correlation among different reproductive traits measured in the two sexes. The estimation of heritability and genetic correlations allows for the computation of di...
Article
Full-text available
The cow’s behaviour and temperament influence handling and productivity. Training including tactile stimuli can improve zebu cow behaviour. The aim of the study was to utilize tactile stimulation training in Gir dairy cows during 14 days and measure cow behaviour. A total of 27 cows were brushed in a squeeze chute. Behavioural parameters, respirato...
Article
We aimed to evaluate multiple-trait Bayesian models for handling censored records in genetic evaluations of age at first calving (AFC) and stayability (STAY) in Nellore cattle. Phenotypic and pedigree datasets were provided by Brazilian Association of Zebu Breeders. Four models were evaluated: linear-threshold model (LTM), penalty-threshold model (...
Article
Autoregressive (AR) and random regression (RR) models were fitted to test‐day records from the first three lactations of Brazilian Holstein cattle with the objective of comparing their efficiency for national genetic evaluations. The data comprised 4,142,740 records of milk yield (MY) and somatic cell score (SCS) from 274,335 cows belonging to 2,32...
Article
Full-text available
• The aim of this study was to investigate the associations between several carcass, performance and meat quality traits in broilers through factor analysis and use the latent variables (i.e. factors) as pseudo-phenotypes in genetic evaluations. • Factors were extracted using the principal components method and varimax rotation algorithm. Genetic p...
Article
Nellore is the main cattle breed used in Brazil, being the largest commercial herd in the world. Beyond the importance of male reproductive efficiency for farm profit, the use of reproductive techniques, mainly artificial insemination, turns the evaluation of male reproductive traits even more important. Estimation of genetic parameters increases t...
Article
Full-text available
Although several studies have investigated the factors affecting imputation accuracy, most of these studies involved a large number of genotyped animals. Thus, results from these studies cannot be directly applied to small populations, since the population structure affects imputation accuracy. In addition, factors affecting imputation accuracy may...
Article
l-arginine supplementation of sows has led to improvement of reproductive performance, but the mechanisms responsible for the positive effects of arginine during gestation on conceptuses survival and development are still poorly understood. Thus, we aimed to evaluate effects of 1.0% l-arginine supplementation (ARG) on phenotypic traits of commercia...
Poster
Full-text available
Objetivou-se avaliar metodologias para a predição genômica de animais cruzados por meio de dados simulados. Foram simuladas populações Bos indicus (L1), Bos taurus (L2) e animais provenientes do cruzamento dessas duas populações (F1). A característica simulada foi o consumo alimentar residual (herdabilidade = 0,33 e variância fenotípica = 12,5). Qu...
Conference Paper
Full-text available
Resumo: A caracterização de raças naturalizadas é importante para que se possa traçar estratégias de conservação eficientes. Objetivou-se estimar parâmetros genéticos para peso ao nascimento e peso ao desmame para suínos da raça Piau. Foram utilizadas 3813 pesagens de leitões provenientes do programa de conservação de suínos da raça Piau da Unidade...
Article
We aimed to characterize the expression of angiogenesis-related genes in corpus luteum (CL) and cumulus cells (CC) during estrous cycle in gilts of different genetic groups, as well as to study the relation between gene expression and phenotypic data. Forty five gilts were used as follows: L1, Commercial Line 1 (Large White x Landrace x Duroc) (n =...
Article
Full-text available
We evaluated the inclusion of information on genetic relationship into the analysis of crude protein requirement in diets for pigs of Brazilian Piau breed, using Bayesian inference. The animals were assigned to treatments in a completely randomized design in factorial scheme 4 × 2 (crude protein levels × sex) with 12 repetitions per treatment. The...
Article
We compared Hurdle Poisson (Hupoisson), Zero Inflated Poisson (Zipoisson), Poisson and Gaussian Bayesian mixed models for genetic evaluation of litter traits in pigs (number of piglets born alive – NBA; number of piglets weaned – NW; and mortality during the suckling period – MORT). The models’ goodness-of-fit was based on Deviance Information Crit...
Article
Full-text available
Genome‐wide association studies (GWASes) have been performed to search for genomic regions associated with residual feed intake (RFI); however inconsistent results have been obtained. A meta‐analysis may improve these results by decreasing the false‐positive rate. Additionally, pathway analysis is a powerful tool that complements GWASes, as it enab...
Article
Full-text available
We compared different Bayesian models to handle censored data for genetic parameters estimation of age at first calving (AFC) in Brazilian Brahman cattle. Data from females with AFC above 1825 days of age were assumed to have failed to calve and were considered as censored records. Data including information of 53,703 cows were analyzed through the...
Poster
A predição genômica é fundamentada na caracterização de fragmentos do genoma na população de treinamento para predizer o mérito genético em uma população alvo. Assumindo o interesse comercial de animais cruzados (F1), como por exemplo em bovinos, o Brangus, são necessários estudos para a estruturação dos processos de predição genômicas. A utilizaçã...
Article
Rhipicephalus (Boophilus) microplus is the main cattle ectoparasite in tropical areas. Gir × Holstein crossbred cows are well adapted to different production systems in Brazil. In this context, we performed genome-wide association study (GWAS) and post-GWAS analyses for R. microplus resistance in an experimental Gir × Holstein F2 population. Single...
Conference Paper
Full-text available
Reticulo-rumen sensor data were used for estrus prediction in Gir heifers. Temperature-sensing reticular boluses were orally administered to 60 heifers, and the ruminal temperature (RRT) and animal activity were recorded every 10 minutes. The cows were synchronized using a hormonal protocol. Logistic regression with binary distribution was employed...
Conference Paper
Full-text available
O presente trabalho teve por objetivo avaliar a influência do estro na largura, rima e comprimento vulvar, utilizando registros morfométricos como indicador de estro em novilhas da raça Gir Leiteiro. Foram utilizadas 55 fêmeas nulíparas, com idade entre 35 e 57 meses, submetidas a protocolo de sincronização de estro e inseminação artificial. As med...
Article
Comprehending mechanisms controlling corpus luteum (CL) angiogenesis and apoptosis in pregnant sows is essential to understand the physiological role of these processes in CL function, progesterone production and consequently in conceptus development and prenatal mortality. CL from 54 sows from two genetic groups, a commercial line (COM) and the lo...
Conference Paper
Temperature sensors were evaluated as indicators of estrus in estrus synchronized dairy Gir heifers, one heifer was exposed to rain (wet heifer) and another was kept dry (dry heifer). For two days and every 12 hours the heifers were monitored for rectal and vaginal temperature (digital thermometer), radiant heat of the eye, vulva and muzzle (thermo...
Article
Full-text available
Meta-analysis based on a random-effects model is used to summarise and overcome the variability between divergent parameter estimates. We proposed a meta-analysis of published heritability and genetic-correlation estimates for reproduction, growth and carcass traits in purebred Nellore cattle. In total, 197 heritability and 107 genetic-correlation...
Article
Full-text available
A large number of quantitative trait loci (QTL) for meat quality and carcass traits has been reported in pigs over the past 20 years. However, few QTL have been validated and the biological meaning of the genes associated to these QTL has been underexploited. In this context, a meta-analysis was performed to compare the significant markers with met...
Article
In the current study we have performed two experiments to evaluate the effects of adipogenic induction media on dedifferentiated fat (DFAT) cells redifferentiation into mature adipocytes. In experiment 1, we aimed to evaluate whether it is necessary to use insulin in the induction media to allow DFAT cells differentiation into mature adipocytes by...
Article
Full-text available
A large number of quantitative trait loci (QTLs) for meat quality and carcass traits has been reported in pigs over the last twenty years. However, few QTLs have been validated and the biological meaning of the genes associated to these QTLs has been underexploited. In this context, a meta-analysis was performed to compare the significant markers w...
Article
We studied the effect of including GWAS results on the accuracy of single- and multipopulation genomic predictions. Phenotypes (backfat thickness) and genotypes of animals from two sire lines (SL1, n = 1146 and SL3, n = 1264) were used in the analyses. First, GWAS were conducted for each line and for a combined data set (both lines together) to est...
Article
Pig breeding companies keep relatively small populations of pure sire and dam lines that are selected to improve the performance of crossbred animals. This design of the pig breeding industry presents challenges to the implementation of genomic selection, which requires large data sets to obtain highly accurate genomic breeding values. The objectiv...
Article
Pig breeding companies keep relatively small populations of pure sire and dam lines that are selected to improve the performance of crossbred animals. This design of the pig breeding industry presents challenges to the implementation of genomic selection, which requires large data sets to obtain highly accurate genomic breeding values. The objectiv...
Article
Genomic selection is applied to dairy cattle breeding to improve the genetic progress of purebred (PB) animals, whereas in pigs and poultry the target is a crossbred (CB) animal for which a different strategy appears to be needed. The source of information used to estimate the breeding values, i.e., using phenotypes of CB or PB animals, may affect...
Article
Genomic selection is applied to dairy cattle breeding to improve the genetic progress of purebred (PB) animals, whereas in pigs and poultry the target is a crossbred (CB) animal for which a different strategy appears to be needed. The source of information used to estimate the breeding values, i.e., using phenotypes of CB or PB animals, may affect...
Article
Knowledge of dominance effects should improve ge-netic evaluations, provide the accurate selection of purebred animals, and enable better breeding strategies, including the exploitation of het-erosis in crossbreeds. In this study, we combined genomic and pedi-gree data to study the relative importance of additive and dominance genetic variation in...
Article
This study aimed to compare two different Genome-Wide Selection (GWS) methods (Ridge Regression BLUP - RR-BLUP and Bayesian LASSO - BL) to predict the genomic estimated breeding values (GEBV) of four phenotypes, including two boar taint compounds, i.e., the concentrations of androstenone (andro) and skatole (ska), and two carcass traits, i.e., back...
Article
Full-text available
Background: Genomic selection and genomic wide association studies are widely used methods that aim to exploit the linkage disequilibrium (LD) between markers and quantitative trait loci (QTL). Securing a sufficiently large set of genotypes and phenotypes can be a limiting factor that may be overcome by combining data from multiple breeds or using...
Article
Full-text available
The local Brazilian pig breed Piau is a lard-type pig that has undergone a breeding and selection process devised by the veterinarian Antonio Teixeira Vianna in 1939. The objective of the program was to develop a dual purpose animal, that is an animal suitable for the production of both fat and meat. The main characteristics of the Piau breed are r...
Article
A raça local brasileira Piau é um suíno tipo banha a qual passou por um processo de seleção realizado pelo médico veterinário Antonio Teixeira Vianna em 1939, com o intuito de desenvolver um animal de dupla aptidão, em outras palavras que fosse adequado para a produção de carne e gordura. As principais características da raça são rusticidade, adapt...
Article
Long term stored DNA can be sometimes the only source of genetic material of an organism that doesn't exist anymore but a research interest still persists. However, there is a lack of information about useful methods to improve quality from such type of material. In this study we compared four different protocols using DNA samples collected in 1998...
Article
Full-text available
Linkage disequilibrium (LD) across the genome is critical information for association studies and genomic selection because it determines the number of SNPs (Single Nucleotide Polymorphism) that should be used for a successful association analysis and genomic selection. LD also influences the accuracy of genomic breeding values. Some studies have d...
Article
Full-text available
The aim of this work was to estimate genetic parameters for carcass, carcass cuts, meat quality and performance traits in an F2 swine population (Piau x commercial strain) in order to understand the inheritance of the traits and the association among them. Heritability estimates and genetic correlations were obtained using univariate and bivariate...
Article
The aim of this work was to estimate genetic parameters for carcass, carcass cuts, meat quality and performance traits in an F2 swine population (Piau x commercial strain) in order to understand the inheritance of the traits and the association among them. Heritability estimates and genetic correlations were obtained using univariate and bivariate...
Article
Full-text available
Mycoplasma hyopneumoniae is the etiologic agent of enzootic pneumonia, which causes important economic losses to swine industry. The Toll-like receptors (TLRs) are pattern-recognition receptors which detect microbial presence and initiate the innate as well as the adaptative immune defense. Toll-like receptor 6 is a type I transmembrane protein tha...
Article
Seventy-two pigs of three genetic groups (Brazilian indigenous breed Piau, Commercial line and Crossbred) of both sexes were slaughtered at four live weights (30, 60, 90 and 120 kg). Intramuscular fat (IMF) content in Longissimus dorsi muscle of each animal was extracted and correlated with candidate gene mRNA expression (ATN1, EEF1A2, FABP3, LDLR,...
Article
Full-text available
Records of Large White breed animals were used to estimate variance components, genetic parameters and trends for the character total number of born piglets (TNBP) as measure of litter size. For obtaining variance components and genetic parameters, it was used the Restricted Maximum Likelihood Method using MTDFREML software. Two mixed models (addit...

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