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Introduction
I am an Emeritus Professor in the Center for Integrative Conservation at the Xishuangbanna Tropical Botanical Garden, Chinese Academy of Sciences, Yunnan, China, and an Honorary Research Fellow at the Royal Botanic Gardens, Kew.
Current institution
Publications
Publications (388)
The Belt and Road Initiative (BRI) has greatly contributed to the global expansion of infrastructure projects, and managing the impacts of its projects on biodiversity is critical to global biodiversity conservation and sustainable development. We rated BRI projects (691) based on their potential effect on threatened species and important biodivers...
Ecological restoration has traditionally had a bottom-up focus on plants and vegetation, but rewilding has been the opposite, and the impacts of rewilding carnivores and large herbivores on plant species and vegetation are largely unknown. The aim of this perspective, therefore, is to clarify what rewilding means for plants and vegetation, to asses...
Extinctions occur when enough individual plants die without replacement to extirpate a population, and all populations are extirpated. While the ultimate drivers of plant extinctions are known, the proximate mechanisms at individual and population level are not. The fossil record supports climate change as the major driver until recently, with land...
Bumblebees, the most important wild pollinators in both agricultural and natural ecosystems, are declining worldwide. The global decline of bumblebees may threaten biodiversity, pollination services, and, ultimately, agricultural productivity. Several factors, including pesticide usage, climate change, habitat loss, and species invasion, have been...
Changes in land use and climate directly impact species populations. Species with divergent characteristics may respond differently to these changes. Therefore, understanding species’ responses to environmental changes is fundamental for alleviating biodiversity loss. However, the relationships between land use changes, climate changes, species' in...
Background
The family Lauraceae is subdivided into six main lineages: Caryodaphnopsideae, Cassytheae, Cryptocaryeae, Hypodaphnideae, Laureae, and Neocinnamomeae. However, phylogenetic relationships among these lineages have been debatable due to incongruence between trees constructed using nuclear ribosomal DNA (nrDNA) sequences and chloroplast (cp...
Aim
Wildlife populations are continuing to decrease worldwide. Understanding the ranking and distribution of drivers of species declines is crucial to enable targeted actions to counteract major threats. However, few studies have assessed the relative importance and geographic distribution of threats to biodiversity in China, even for high‐profile...
Feralization is an important evolutionary process, but the mechanisms behind it remain poorly understood. Here, we use the ancient fiber crop, ramie (Boehmeria nivea (L.) Gaudich.) as a model to investigate genomic changes associated with both domestication and fertilization. We first produced a chromosome-scale de novo genome assembly of feral ram...
Conservation programs for plant species with extremely small populations (PSESP) have been successfully implemented for several decades in China. Here we highlight how their inclusion in several national conservation policies helps meet targets of the Kunming–Montreal Global Biodiversity Framework (KMGBF) and show how lessons from these programs ca...
Climate change and other anthropogenic disturbances are increasing liana abundance and biomass in many tropical and subtropical forests. While the effects of living lianas on species diversity, ecosystem carbon, and nutrient dynamics are receiving increasing attention, the role of dead lianas in forest ecosystems has been little studied and is poor...
The insect mitogenome is typically a compact circular molecule with highly conserved gene contents. Nonetheless, mitogenome structural variations have been reported in specific taxa, and gene rearrangements, usually the tRNAs, occur in different lineages. Because synapomorphies of mitogenome organizations can provide information for phylogenetic in...
The biogeographical history of many lineages within the Lauraceae remains poorly known because of the difficulty of assigning macrofossils to living genera, poor pollen preservation, and the absence of sufficiently resolved or well-supported phylogenies. Here, we utilize plastid genome sequencing to reinvestigate the phylogenetic and biogeographic...
Simple Summary
Our study investigated the dynamics of pathogen communities within Chinese bumblebee populations, a key issue for understanding emerging infectious diseases and their impacts on insect biodiversity loss. By employing computational modeling on extensive pathogen data from bumblebees, we uncover that the host species variation signific...
Epiphytes offer an appealing framework to disentangle the contributions of chance, biotic and abiotic drivers of species distributions. In the context of the stress‐gradient theory, we test the hypotheses that (i) deterministic ( i.e. , non‐random) factors play an increasing role in communities from young to old trees, (ii) negative biotic interact...
This is a reply to criticism of zero extinction targets for land plants by Cannon and Lerdau.
Despite the importance of plants for humans and the threats to their future, plant conservation receives far less support compared with vertebrate conservation. Plants are much cheaper and easier to conserve than are animals, but, although there are no technical reasons why any plant species should become extinct, inadequate funding and the shortag...
Long-distance dispersal (LDD) beyond the range of a species is an important driver of ecological and evolutionary patterns, but insufficient attention has been given to postdispersal establishment. In this review, we summarize current knowledge of the post-LDD establishment phase in plant colonization, identify six key determinants of establishment...
Global biodiversity is in crisis as a result of human activity. This biodiversity crisis has been well documented by scientists, recognized by world leaders, politicians, businesses, and citizens. Both the biodiversity and climate crises need to be addressed now. 2020 was when this change was supposed to start, with the 15th Conference of Parties (...
In May‐June 2021 a herd of wild Asian elephants made global headlines when they trekked hundreds of km into areas where elephants had been absent for centuries, mobilizing a response of unprecedented scale. Here, we analyze the movement attributes and body condition of these elephants to understand this unusual behavior and its implications for meg...
The availability of a global checklist of known land plants makes it possible to bring together all botanical information and make it accessible online. Two obstacles remain, however. First, most existing information is not yet digitized. Second, an estimated 10%‒25% more species are still undescribed and therefore invisible to science.
Epiphytic communities offer an original framework to disentangle the contributions of environmental filters, biotic interactions and dispersal limitations to community structure at fine spatial scales. We determine here whether variations in light, microclimatic conditions and host tree size affect the variation in species composition and phylogene...
Hemiepiphytic figs killing their host trees is an ecological process unique to the tropics. Yet the benefits and adaptive strategies of their special life history remain poorly understood.
We compared leaf phosphorus (P) content data of figs and palms worldwide, and functional traits and substrate P content of hemiepiphytic figs (Ficus tinctoria),...
The exceptional density of plant and animal collectors and collections has made Singapore the world’s leading case study of tropical biodiversity under stress. Singapore shows how much native biodiversity can survive under extreme human pressure, but there are also other lessons that can be learned from this small island. Despite two centuries of c...
Rates of seed dispersal have rarely been considered important. Here, we demonstrate through field observations and experiments that rapid dispersal is essential for the unusually short-lived seeds of Aquilaria sinensis (agarwood; Thymelaeaceae), which desiccate and die within hours of exposure by fruit dehiscence in the hot, dry forest canopy in tr...
Conspecific negative distance- and density-dependence is believed to be one of the most important mechanisms controlling forest community assembly and species diversity globally. Plant pathogens, and insect and mammalian herbivores, are the most common natural enemy types that have been implicated in this phenomenon, but their general effects at di...
The draft post-2020 Global Biodiversity Framework asks CBD parties to conserve at least 30% of the planet by 2030 ‘through a well-connected and effective system of protected areas … with the focus on areas particularly important for biodiversity’. We use Thailand as a case study for the ability of a densely populated, hyper diverse, tropical, middl...
Although 23% of Thailand’s land is in protected areas, these are vulnerable to climate change. We used spatial distribution modelling for 866 vertebrate and 591 plant species to understand potential climate change impacts on species in protected areas. Most mammals, birds, and plants were projected to decline by 2070, but most amphibians and reptil...
Morphological approaches often fail to delimit species in recently derived species complexes. This can be exacerbated in historical collections which may have lost key features in specimen preparation and preservation. Here, we examine the Pedicularis siphonantha complex, endemic to the Mountains of Southwest China. This complex is characterized by...
Epiphytic communities live in a unique, three-dimensional micro-habitat space that offers an original framework to disentangle the contribution of environmental filters, biotic interactions and dispersal limitation to community structure at small spatial scales. We took advantage of a tropical canopy crane facility to record and model spatio-tempor...
Aim
For tens of millions of years, herbivorous megafauna were abundant across the globe, fulfilling important ecological roles including seed dispersal. Megafruits are very large fruits that are dispersed most effectively by megafauna. However, megafruits also occur in ecosystems where megafauna are extinct or were never present, emphasizing our in...
The hollies (Ilex L., Aquifoliaceae) form a large (>669 spp.) genus of forest trees and shrubs, which is almost cosmopolitan in mesic environments but most diverse in subtropical China and montane South America. Throughout the range of the genus, Ilex species have been utilized as beverages, medicines, ornamentals, honey plants, timber, and for var...
Southwest China is a plant diversity hotspot. The near-cosmopolitan genus Ilex (c. 664 spp., Aquifoliaceae) reaches its maximum diversity in this region, with many narrow-range and a few widespread species. Divergent selection on widespread species leads to local adaptation, with consequences for both conservation and utilization, but is counteract...
People are now impacting the natural environment at an unparalleled scale. The Intergovernmental Science-Policy Platform on Biodiversity and Ecosystem Services (IPBES) warns that up to one million species may be threatened with extinction. Protected areas (PAs) represent a key conservation strategy for addressing human environmental impacts. In 201...
Most biological invasion literature—including syntheses and meta-analyses and the resulting theory—is reported from temperate regions, drawing only minimally from the tropics except for some island systems. The lack of attention to invasions in the tropics results from and reinforces the assumption that tropical ecosystems, and especially the conti...
The phylogenetic relationships between species of the genus Dumasia have been revealed by previous studies. However, some taxonomic problems still remain to be resolved. In this article, we recognize 10 species of Dumasia. We re-circumscribe D. yunnanensis Y. T. Wei & S. K. Lee, promote D. nitida var. kurziana Predeep & M. P. Nayar as a distinct sp...
We report complete chloroplast genome (plastome) sequences of Stylidium debile (150,105 bp) and Stylidium petiolare (150,998 bp). Both plastomes had the typical quadripartite structure, with large single-copy (LSC) and small single-copy (SSC) regions separated by two inverted repeat (IR) regions. Both plastomes have lost the rps19 and ycf15 CDS gen...
Stingless bees (Meliponini) form a large monophyletic group with a pantropical distribution. Southern China is on the northern border of this distribution in Asia, and previous studies have recorded a single species in Taiwan and twelve species in Yunnan. In this study, by extensive sampling from both natural nests and the nests of bee keepers in Y...
Most biological invasion literature—including syntheses and meta-analyses and the resulting
theory—is reported from temperate regions, drawing only minimally from the tropics except for
some island systems. The lack of attention to invasions in the tropics results from and reinforces
the assumption that tropical ecosystems, and especially the conti...
Transboundary conservation is playing an increasingly important role in maintaining ecosystem integrity and halting biodiversity loss caused by anthropogenic activities. However, lack of information on species distributions in transboundary regions and understanding of the threats in these areas impairs conservation. We developed a spatial conserva...
The plastid genome (plastome) is highly conserved in both gene order and content and has a lower mutation rate than the nuclear genome. However, the plastome is more variable in heterotrophic plants. To date, most such studies have investigated just a few species or only holoheterotrophic groups, and few have examined plastome evolution in recently...
Consumption of fleshy fruits by frugivorous animals, which then disperse the seeds inside, is a key ecological process, particularly in forests. Fruit is an easy food to consume but is nutritionally dilute so specialist frugivores need adaptations for efficient location, harvest, and digestion. High dependence on fleshy fruits has evolved in many b...
It has been hypothesized that biotic interactions are stronger towards lower latitudes and elevations. However, results vary among interaction systems and experimental protocols. Our goal was to examine the validity of this prediction by using a standardized method to investigate seed-animal interaction. We assessed removal by animals for 40 960 se...
Protected areas are the backbone of biodiversity conservation but vulnerable to climate change. Thailand has a large and well-planned protected area system, covering most remaining natural vegetation. A statistically derived global environmental stratification (GEnS) was used to predict changes in bioclimatic conditions across the protected area sy...
Ecologists and conservation biologists conducting long-term research programs in the tropics must confront serious ethical challenges that revolve around economic inequalities, cultural differences, supporting the local communities as much as possible, and sharing the knowledge produced by the research. In this collective article, researchers share...
China is home to a small but expanding population of wild Asian elephants (Elephas maximus). Both research interest and conservation efforts have increased in recent years, but these have been fragmented. Here we present the results from a collaborative, multi-sectorial, multi-stakeholder exercise to identify priorities for Chinese elephant researc...
Biodiversity science in China has seen rapid growth over recent decades, ranging from baseline biodiversity studies to understanding the processes behind evolution across dynamic regions such as the Qinghai-Tibetan Plateau. We review research, including species catalogues, biodiversity monitoring, the origins, distributions, maintenance, and threat...
Biodiversity science in China has seen rapid growth over recent decades, ranging from baseline biodiversity studies to understanding the processes behind evolution across dynamic regions such as the Qinghai-Tibetan Plateau. We review research, including species catalogues; biodiversity monitoring; the origins, distributions, maintenance and threats...
Conspecific negative distance- and density-dependence is often assumed to be one of the most important mechanisms controlling forest community assembly and species diversity globally. Plant pathogens, and insect and mammalian herbivores, are the most common natural enemy types that have been implicated in this phenomenon, but their general effects...
The holly genus, Ilex, in the monogeneric Aquifoliaceae, is the largest woody dioecious genus (> 664 spp.), with a near‐cosmopolitan distribution in mesic environments. We constructed a phylogeny based on two nuclear genes, representing 177 species spread across the geographical range, and dated using macrofossil records. The five main clades had a...
It has been hypothesized that biotic interactions are stronger towards lower latitudes and elevations. However, results vary among interaction systems and experimental protocols. Our goal was to examine the validity of this prediction by using a standardized method to investigate seed–animal interaction. We assessed removal by animals for 40 960 se...
This 381-paged book covers the biology, ecology, impact and management of 34 common alien invasive species, with reviews on the history and context of avian introductions and invasions in five major regions (Oceania, Africa, Europe (including the Middle East, Asia and South America)), as well as management challenges and the potential of citizen sc...
Conspecific negative distance- and density-dependence is believed to be one of the most important mechanisms controlling forest community assembly and species diversity globally. Plant pathogens, and insect and mammalian herbivores, are the most common natural enemy types that have been implicated in this phenomenon, but their general effects at di...
Biochar can enhance crop production and sequester carbon, but there have been few studies with tree crops. Rubber plantations cover more than 8 million hectares in Southeast Asia, so we assessed the feasibility of biochar application in these plantations with a pot trial. Rubber seedlings were planted in soil with four concentrations (0, 1.25%, 2.5...
Rubber plantations expanded in Southeast Asia at the expense of tropical forests. Projected future demand will likely be met by plantations in New Guinea and West Africa. A new study attempts to reconcile this rubber expansion with biodiversity conservation. This is an invited commentary on the article.
Protected areas are the backbone of biodiversity conservation but are fixed in space and vulnerable to anthropogenic climate change. Myanmar is exceptionally rich in biodiversity but has a small protected area system. This study aimed to assess the potential vulnerability of this system to climate change. In the absence of good biodiversity data, w...
Asking authors who have tested interventions to explain how they have placed their paper in context will help ensure conservation science reduces the perils of cherry picking scientific evidence and will improve the design of future work. It will not provide a complete remedy to bias in conservation articles. Ideally, the impact of this measure wil...
Background: Until 50 years ago, Xishuangbanna was a heavy forest-covered region with high biodiversity. Attributed to the rubber boom that took place in the region during the last decades, natural forest area decreased quickly and was replaced by monoculture rubber plantations (Hevea brasiliensis). To slow down the deforestation rate and encourage...
In the last 50 years, intensive agriculture has replaced large tracts of rainforests. Such changes in land use are driving niche-based ecological processes that determine local community assembly. However, little is known about the relative importance of these anthropogenic niche-based processes, in comparison to climatic niche-based processes and...
Myanmar is botanically rich and floristically diverse: one of the world's biodiversity hotspots. However, Myanmar is still very unevenly explored, and until a plant checklist was published in 2003, relatively little work was done on its flora. This checklist included 11,800 species of spermatophytes in 273 families. Since this checklist was publish...
Vegetation in tropical Asia is highly diverse due to large environmental gradients and heterogeneity of landscapes. This biodiversity is threatened by intense land use and climate change. However, despite the rich biodiversity and the dense human population, tropical Asia is often underrepresented in global biodiversity assessments. Understanding h...
Conserving biodiversity in the face of ever-increasing human pressure is hampered by our lack of basic information on species occurrence, distribution, abundance, habitat requirements , and threats. Obtaining this information requires efficient and sensitive methods capable of detecting and quantifying true occurrence and diversity, including rare,...
The Anthropocene is marked by twin crises: climate change and biodiversity loss. Climate change has tended to dominate the headlines, reflecting, in part, the greater complexity of the biodiversity crisis. Biodiversity itself is a difficult concept. Land plants dominate the global biomass and terrestrial arthropods probably dominate in terms of num...
The outbreak of COVID-19 started in mid-December 2019 in Wuhan, China. Up to 29 February 2020, SARS-CoV-2 (HCoV-19 / 2019-nCoV) had infected more than 85 000 people in the world. In this study, we used 93 complete genomes of SARS-CoV-2 from the GISAID EpiFlu TM database to investigate the evolution and human-to-human transmissions of SARS-CoV-2 in...
Hunting and deforestation are the two biggest threats to vertebrates in Southeast Asia. In the last 50 years, monoculture rubber plantations replaced large areas of tropical rainforests in Xishuangbanna, southwest China. We set up camera traps at 109 stations (57 in forest reserves and 52 in rubber plantations) to determine the distribution of mamm...
The outbreak of COVID-19 started in mid-December 2019 in Wuhan, China. Up to 29 February 2020, SARS-CoV-2 (2019-nCoV) had infected more than 85 000 people in the world. In this study, we used 139 complete genomes of SARS-CoV-2 from the GISAID EpiFluTM database to investigate the evolution and human-to-human transmissions of SARS-CoV-2 in the first...
Limiting climate change to less than 2°C is the focus of international policy under the climate convention (UNFCCC), and is essential to preventing extinctions, a focus of the Convention on Biological Diversity (CBD). The post-2020 biodiversity framework drafted by the CBD proposes conserving 30% of both land and oceans by 2030. However, the combin...
Limiting climate change to less than 2°C is the focus of international policy under the climate convention (UNFCCC), and is essential to preventing extinctions, a focus of the Convention on Biological Diversity (CBD). The post‐2020 biodiversity framework drafted by the CBD proposes conserving 30% of both land and oceans by 2030. However, the combin...
Background. The outbreak of COVID-19 started in mid-December 2019 in Wuhan, Central China. Up to February 18, 2020, SARS-CoV-2 has infected more than 70,000 people in China, and another 25 countries across five continents. In this study, we used 93 complete genomes of SARS-CoV-2 from the GISAID EpiFluTM database to decode the evolution and human-to...
Research Highlights: The reasons for persistence of forest fragments in human-dominated landscapes have rarely been examined, despite their importance in biodiversity and ecosystem services. We determined these reasons for forest fragments on collective land in Xishuangbanna prefecture, southwest China. Background and Objectives: Reconciling econom...
Species exposed to anthropogenic climate change can acclimate, adapt, move, or be extirpated. It is often assumed that movement will be the dominant response, with populations tracking their climate envelopes in space, but the numerous species restricted to specialized substrates cannot easily move. In warmer regions of the world, such edaphic spec...
Spondias pinnata (Linn. f.) Kurz (Anacardiaceae) is widely distributed in tropical Asia, where it is commonly used as a vegetable and fruit, and is attracting increasing research attention. In this study, we investigated the chemical composition and the cytotoxic, antimicrobial, and anti-inflammatory activities of the fruit peel essential oil of S....
Background:
The genus Ilex (Aquifoliaceae) has a near-cosmopolitan distribution in mesic habitats from tropical to temperate lowlands and in alpine forests. It has a high rate of hybridization and plastid capture, and comprises four geographically structured plastid groups. A previous study showed that the plastid rbcL gene, coding for the large s...
A key feature of life’s diversity is that some species are common but many more are rare. Nonetheless, at global scales, we do not know what fraction of biodiversity consists of rare species. Here, we present the largest compilation of global plant diversity to quantify the fraction of Earth’s plant biodiversity that are rare. A large fraction, ~36...
Fungi are key organisms in terrestrial ecosystems, functioning as decomposers, pathogens, and symbionts. Identifying the mechanisms that shape metacommunity patterns is likely to be critical for predicting how ecosystems will respond to global environmental change. Using fungal occurrence data and a hierarchical approach that combines three element...
Fungi are among the most widely distributed organisms on Earth, performing key roles in nutrient cycling, disease, and the global carbon cycle. However, studies on regional-scale fungal assemblage patterns and the underlying drivers, are scarce. The aim of this research was to determine the relative importance of environmental heterogeneity and spa...
We reported in November 30, 2018 that a jumping spider, Toxeus magnus, feeds its juveniles with milk and provides extended parental care until they reach sexually maturity. Benoit et al. (February 07, 2019) pointed out that providing a nutritive substance to offspring is not uncommon in the Arthropoda and argued that spider milk should be considere...
The expansion of rubber plantations in northern Southeast Asia over the last 20 years displaced shifting cultivation and tropical forests. In Xishuangbanna, SW China, rubber occupied 22% of the area by 2010, reducing lowland forest to scattered fragments, with severe impacts on plants, animals, and ecosystem services. The rubber price has declined...
Tropical East Asia is home to over 1 billion people and faces massive human impacts from its rising population and rapid economic growth. It has already lost more than half of its forest cover and has the highest rates of deforestation and logging in the tropics. Hunting and the trade in wildlife products threaten all its large and many smaller ver...
Questions
Questions (26)
Animals in urban areas interact with all plants that are growing outdoors, irrespective of their status as native or alien, spontaneous or cultivated, i.e. the 'total flora'. Plant ecologists, however, tend to keep these categories separate. Chong et al. (attached) compiled a total flora for the city state of Singapore, but this is unusual because Singapore still has protected remnants of hyperdiverse tropical rainforest. In older cities, particularly in the temperate zone, cultivated plants dominate the biomass and the biodiversity, and the spontaneous flora has a large alien component. I'd like to do a global comparison, but I am finding it difficult to find examples. For many cities, a total flora list could be assembled from existing, separate lists for the different categories, but these tend to cover different areas and/or different dates, so I am hoping for total flora lists that have already been assembled by local experts.