Qianshi Lin

University of British Columbia - Vancouver | UBC · Department of Botany

Background Orobanchaceae is the only flowering plant family with species from free-living nonparasite, hemi-parasite to holoparasite, making it an ideal system for studying the evolution of parasitism. However, both plastid and mitochondrial genome have been sequenced in only few parasitic species in Orobanchaceae. Therefore, further comparative st...

Horizontal gene transfers (HGTs) from host or other organisms have been reported in mitochondrial genomes of parasitic plants. Genes transferred in this fashion have usually been found non-functional. Several examples of HGT from the mitochondrial genome of parasitic Cuscuta (Convolvulaceae) to its hosts have been reported, but not vice versa. Here...

Fully mycoheterotrophic plants can be difficult to place in plant phylogeny due to elevated substitution rates associated with photosynthesis loss. This potentially limits the effectiveness of downstream analyses of mycoheterotrophy that depend on accurate phylogenetic inference. While mitochondrial genomic data sets are rarely used in plant phylog...

To survive in nutrient-poor habitats, carnivorous plants capture small organisms comprising complex substances not suitable for immediate reuse. The traps of carnivorous plants, which are analogous to the digestive systems of animals, are equipped with mechanisms for the breakdown and absorption of nutrients. Such capabilities have been acquired co...

Significance Since Darwin’s ground-breaking monograph on carnivorous plants, scientists have recognized only 11 independent origins of plant carnivory. We report the discovery of a new lineage of carnivorous plants, represented by the North American flowering plant Triantha occidentalis . Among monocots, Triantha represents the only instance of a s...

We used a bi‐organellar phylogenomic approach to address higher‐order relationships in Pandanales, including the first molecular phylogenetic study of the panama‐hat family, Cyclanthaceae. Our genus‐level study of plastid and mitochondrial gene sets includes a comprehensive sampling of photosynthetic lineages across the order, and provides a framew...

Premise: Phylogenetic trees of bryophytes provide important evolutionary context for land plants. However, published inferences of overall embryophyte relationships vary considerably. We performed phylogenomic analyses of bryophytes and relatives using both mitochondrial and plastid gene sets, and investigated bryophyte plastome evolution. Method...

Hydatellaceae are a small aquatic family of 12 species related to water lilies, part of the ANITA grade of angiosperms. Our current understanding of the family’s phylogenetic relationships comes from several plastid genes and nuclear ITS data. These data sets are generally highly congruent, and lend support to the monophyly of multiple species. How...