Patrick Reis-Santos

University of Adelaide · School of Biological Sciences

Otolith elemental signatures (Li:Ca, Mg:Ca, Mn:Ca, Cu:Ca, Sr:Ca, Ba:Ca and Pb:Ca) of age-0 juveniles of flounder Platichthys flesus and sea bass Dicentrarchus labrax, collected from estuarine systems along the Portuguese coast in 2006 and 2009 were used as baseline signatures to identify the estuarine nursery of age-3+ and 2+ coastal fish matching...

Fish otoliths are widely used to answer biological and ecological questions related to movements and habitat use based on their chemical composition. Two fundamental assumptions underlie otoliths as environmental tracers and proxies for reconstructing exposure histories: (i) otolith chemistry reflects water chemistry, and (ii) ambient environmental...

Processes regulating population connectivity are complex, ranging from extrinsic environmental factors to intrinsic individual based features, and are a major force shaping the persistence of fish species and population responses to harvesting and environmental change. Here we developed an integrated assessment of demographic and genetic connectivi...

Sclerochronological approaches using fish otoliths provide a powerful and cost-effective means to evaluate fish responses to environmental variations in regions where there is a paucity of long-term data. We hypothesised that the dynamism in the environmental conditions associated with El Niño Southern Oscillation (ENSO) events in the Southern Atla...

Fish growth underpins individual fitness and population-level metrics, with fluctuations linked to environmental variability. Growth chronologies derived from otolith increment analysis are a powerful proxy to understand population responses to environmental change and productivity. Yet, long-term patterns of growth and their environmental drivers...

Microplastic and nanoplastic sampling and reporting guide

Understanding fish movement is critical in determining the spatial scales in which to appropriately manage wild populations. Genetic markers provide a natural tagging approach to assess the degree of gene flow and population connectivity across a species distribution. We investigated the genetic structure of black bream Acanthopagrus butcheri acros...

Marine sampling field manual for microplastics. In Field Manuals to Monitor Australian Waters, Version 3. Przeslawski R, Foster S (Eds). National Environmental Science Program

The dusky grouper (Epinephelus marginatus) is an overfished and threatened fish species with coastal distribution. In the Southwestern Atlantic, it occurs across a broad region influenced by two major oceanographic features: the Cabo Frio (23°S) and the Cabo Santa Marta (28°S) upwelling systems. Along the Brazilian coast, the species may present co...

Context Microplastics are widespread in aquatic ecosystems and are commonly recorded in water, sediment and a broad spectrum of marine biota. Yet, the extent to which organisms ingest microplastics directly or indirectly by trophic transfer is largely unknown. Aims This study characterises microplastic abundance across intertidal water, sediment, a...

Ocean warming is associated with the tropicalization of fish towards higher latitudes. However, the influence of global climatic phenomena like the El Niño Southern Oscillation (ENSO) and its warm (El Niño) and cold (La Niña) phases on tropicalization has been overlooked. Understanding the combined effects of global climatic forces together with lo...

Anthropogenic chemical contamination represents a key stressor of natural environments with pharmaceuticals comprising a particular group of emerging pollutants with the potential to induce biological responses in non-target organisms. Therefore, an analytical method based on ultra-high-performance liquid chromatography coupled to time-of-flight ta...

The high demand and economic relevance of cephalopods make them prone to food fraud, including related to harvest location. Therefore, there is a growing need to develop tools to unequivocally confirm their capture location. Cephalopod beaks are nonedible, making this material ideal for traceability studies as it can also be removed without a loss...

Contamination of surface waters by pharmaceuticals is an emerging problem globally. This is because the increased access and use of pharmaceuticals by a growing world population lead to environmental contamination, threatening non-target species in their natural environment. Of particular concern are neuroactive pharmaceuticals, which are known to...

Seafood is an important source of protein and micronutrients, but fishery stocks are increasingly under pressure from both legitimate and illegitimate fishing practices. Sustainable management of our oceans is a global responsibility, aligning with United Nations Sustainable Development Goal 14, Life Below Water. In a post-COVID-19 world, there is...

Sodium Dodecyl Sulfate (SDS) is an anionic surfactant, extensively used in detergents, household and personal care products, as well as in industrial processes. The present study aimed to disclose the potential toxicological effects of SDS exposure under environmentally relevant concentrations (0, 0.1, 1, 3, and 10 mg L−1) on the physiology and bio...

Provenance and traceability are key aspects of seafood safety, supporting managers, and regula-tors, and allowing consumers to have clear information about the origin of the seafood products they consume. In the present study, we developed an innovative spectral approach based on total reflection X-ray fluorescence (TXRF) spectroscopy to identify t...

In the context of expanding fish production and complex distribution chains, traceability, provenance and food safety tools are becoming increasingly important. Here, we compare the elemental fingerprints of gilthead seabream (Sparus aurata) muscle from the wild and different aquaculture productions (semi-intensive earth ponds; and intensive sea ca...

Emerging pollutants impose a high degree of stress on marine ecosystems, compromising valuable resources, the planet and human health. Pharmaceutical residues often reach marine ecosystems, and their input is directly related to human activities. Fluoxetine is an antidepressant, and one of the most prescribed selective serotonin reuptake inhibitors...

Graphical abstract for our recent publication on the use of otoliths in fisheries science.

Chemical analysis of calcified structures continues to flourish, as analytical and technological advances enable researchers to tap into trace elements and isotopes taken up in otoliths and other archival tissues at ever greater resolution. Increasingly, these tracers are applied to refine age estimation and interpretation, and to chronicle respons...

Marine ecosystem restoration is fast becoming the primary tool for repairing the socio-ecological functions and economic benefits of coastal ecosystems. Healthy seascapes are characterized by many interacting species and intermingled habitats (e.g., seagrass, kelp, shellfish, sedimentary) that co-create ecological functions of substantial socio-eco...

Microplastics have been documented in a plethora of marine environments and organisms. These small plastics threaten ecosystem health, with implications for seafood species’ health. Oysters are an important cultural and economic aquaculture species globally. Due to their filter feeding mechanisms, they can act as an indicator species and proxy for...

Present-day COVID-19 pandemic led to the increasing daily use of antimicrobials worldwide. Triclosan is a manmade disinfectant chemical used in several of consumer healthcare products, thus being frequently detected in surface waters. In the present work, we aimed to evaluate triclosan effect on diatom cell photophysiology, fatty acid profiles and...

The use of glyphosate-based herbicides (GBH) worldwide has increased exponentially over the last two decades increasing the environmental risk to marine and coastal habitats. The present study investigated the effects of a GBH at environmentally relevant concentrations (0, 10, 50, 100, 250, and 500 μg L−1), on the physiology and biochemistry (photo...

The meagre is among the largest Sciaenidae in the world (max: 230 cm, 103 kg), with a wide distribution range encompassing the NE and CE Atlantic Ocean and the Mediterranean Sea. The life cycle in Atlantic waters includes migratory movements from feeding and overwintering areas at sea to spawning and nursery areas in estuaries and coastal waters. H...

Bioinvasions pose undeniable threats and trigger changes in salt marsh ecosystem functioning. In Mediterranean and Atlantic marshes, the invasion by S. patens contributed to added competitive pressure to native middle-upper marsh species such as H. portulacoides. The introduction of a new and aggressive non-indigenous species (NIS) is a game-change...

Microplastic abundance and characteristics were assessed in five decapod crustaceans purchased from seafood markets and collected in coastal waters around Australia (South Australia, New South Wales, Queensland, Northern Territory, and Western Australia). Three species of prawns (king, banana and tiger prawns) and two species of crabs (blue-swimmer...

Determining where harvested or produced seafood comes from is a pressing issue worldwide, with growing consumers’ demand for traceable and sustainable seafood products. Identifying fine-scale traceability markers is particularly important in the context of small-scale fisheries, which are prone to illegal harvesting and mislabelling and associated...

This chapter provides an overview of the main drivers of change in estuarine systems, their expected causes and impacts on estuarine fish and fisheries. An analysis of global, regional and local patterns of estuarine fish and how climate‐induced change may impact estuarine systems and their fish communities is provided. We also examine the main env...

In recent years, validation of seafood authenticity and provenance has attracted the attention of authorities and consumers. Increasing levels of food fraud has raised awareness regarding seafood traceability, especially in highly valuable and highly consumed seafood products, such as the common octopus (Octopus vulgaris). Seafood traceability stud...

Recent global changes have contributed to water scarcity and land degradation, urging for the development of alternative solutions in agriculture. Halophytes biosaline agriculture has been viewed in the past decades as a potential alternative to traditional agriculture practices in degraded lands and salinized soils. Abandoned salt pans provide ide...

Aquaculture is a critical food source for the world's growing population, producing 52% of the aquatic animal products consumed. Marine aquaculture (mariculture) generates 37.5% of this production and 97% of the world's seaweed harvest. Mariculture products may offer a climate-friendly, high-protein food source, because they often have lower greenh...

Bioinvasions pose undeniable threats and trigger changes in salt marsh ecosystem functioning. In Mediterranean and Atlantic marshes, the invasion by S. patens contributed to added competitive pressure to endemic middle-upper marsh species such as H. portulacoides . The introduction of a new and aggressive non-indigenous species (NIS) is a game-chan...

Plastic ingestion in seafood species, and human consumers, are thought to have potential harmful impacts. However, there is limited information from seafood industry stakeholder groups, including processors, traders and fishers, about how they perceive plastic pollution, its impacts and potential management. Using the South Australian Marine Scalef...

Plastic contamination is ubiquitous, with plastic found in hundreds of species of aquatic wildlife, including fish. Lacking a broad and comprehensive view of this global issue across aquatic environments, we collated and synthesised the literature that focuses on microplastic ingestion in fish from marine, freshwater and estuarine environments. Fir...

The verification of food authenticity and provenance is a complex task and has raised public concern in recent years due to multiple episodes of food fraud and potential risks to consumers. In this sense, the evaluation of multi-elemental signatures is increasingly applied to confirm and validate the site of origin of animal products. Yet, we lack...

Connectivity is a critical property of wild fish populations, driving population replenishment, persistence and resilience to harvest. Therefore, integrating natural tags that enable us to estimate connectivity at different spatio-temporal scales has important implications to fisheries management. Black bream Acanthopagrus butcheri are an important...

The invasion of natural communities by non-indigenous species represents one of the most serious threats to biodiversity. Understanding the ecophysiology of invasive species can provide insights into potential physiological handicaps relative to native species. By doing so, we can leverage the development of ecoengineering solutions for the removal...

Coastal areas host some of the planet’s most productive ecosystems, providing life-sustaining ecological services and several benefits to humankind, while also being some of the most threatened areas (e.g., by globalization, climate change, and biological invasion). Salt marshes are coastal habitats with a key role in food and shelter provisioning,...

Plastic pollution has increased significantly in the past decades and is now a major global environmental issue. Plastic objects enter the ocean and are broken down into smaller pieces, while wastewater and runoff also carry microplastics (plastics <5 mm) into the ocean. Plastic has been found in over 700 different species of marine wildlife but li...

Awareness surrounding plastic pollution has increased significantly in the past decade, leading to concerns on potential adverse effects on biota, including the consumption of microplastic by fish. Globally, plastic has been found in many species of fish, but little research has been undertaken in the southern hemisphere. We assessed the abundance...

Transitional ecosystems are among the most degraded ecosystems worldwide, with several groups of organisms investigated for their reliability as biological indicators of human-driven disturbances. Recently non-traditional biochemical biomarkers such as an individual’s fatty acids profile have been identified as promising tools for assessing contami...

Connectivity between spawning grounds and recruitment areas of marine fish species drives population structure and dynamics, and may be affected by climate-induced changes in oceanographic processes. We analysed the variability in recruitment success of larvae to estuarine nursery areas along the Iberian Atlantic coast of four fish species with dis...

We screened for the presence of 66 different pharmaceutical residues in surface waters and in multiple invertebrate and fish species of the Tejo estuary to produce an environmental risk assessment of individual pharmaceuticals and their mixtures, as well as evaluate the bioaccumulation of pharmaceuticals in one of Europe’s largest estuarine systems...

Herein, we demonstrate, for the first time, that covalent organic frameworks (COFs) can be efficient adsorbents for the screening of pharmaceuticals in real water samples, obtaining highly representative data on their occurrence and avoiding the cost of carrying high volume samples and tedious and costly clean-up and preconcentration steps. Of the...

Marine and coastal ecosystems are the ultimate sink of many contaminants from anthropogenic activities, such as trace elements. Although several ecotoxicological tests are available using autotrophic organisms, none focus on marine plants. Juncus acutus has already showed that it is a good candidate for ecotoxicological studies, providing a good se...

In recent years, the Antarctic territory has seen a rise in the number of tourists and scientists. This has led to an increase in the anthropogenic footprint in Antarctic ecosystems, namely in terms of emerging contaminants, such as Biocides, Persistent Organic Pollutants (POPs) as well as Pharmaceutical and Personal Care Products (PPCPs). Yet scar...

Increasing input of Metal Engineered Nano Particles (MeENPs) in marine ecosystems has raised concerns about their potential toxicity on phytoplankton. Given the lack of knowledge on MeENPs impact on these important primary producers, the effects of Copper Oxide (CuO) ENPs on growth, physiology, pigment profiles, fatty acid (FA) metabolism, and oxid...

Present demographic trends suggest a rise in the contributions of human pharmaceuticals into coastal ecosystems, underpinning an increasing demand to evaluate the ecotoxicological effects and implications of drug residues in marine risk assessments. Propranolol, a non-selective β-adrenoceptor blocker, is used worldwide to treat high blood pressure...

Glyphosate is the main active component of the commercial formulation Roundup®, the most used chemical herbicide worldwide. However, its potential high toxicity to the environment and throughout trophic webs has come under increasing scrutiny. The present study aims to investigate the application of bio-optical techniques and its correlation with t...

Emerging pollutants such as pharmaceuticals are continuously released to aquatic environments posing a rising threat to marine ecosystems. Yet, monitoring routines and ecotoxicity data on biota worldwide for these substances are lacking. Non-steroidal anti-inflammatory drugs are among the most prescribed and found pharmaceuticals in aquatic environ...

Salt marsh ecosystems are extremely impacted by human activities whilst also acting as sinks of contaminants such as heavy metals. Halophytic plant species can survive and thrive in estuarine and coastal areas with higher salt conditions that are generally not favourable to most plants. Halophyte distribution and abundance clearly relate to anthrop...

Pharmaceutical residues impose a new and emerging threat to aquatic environments and its biota. One of the most commonly prescribed pharmaceuticals is the antidepressant fluoxetine, a selective serotonin re-uptake inhibitor that has been frequently detected, in concentrations up to 40 μg L–1, in aquatic ecosystems. The present study aims to investi...

Within the Tejo Estuary, non-indigenous species (NIS) Spartina patens colonizes the upper middle marsh competing with the native Halimione portulacoides for space and resources. Due to the very different root system and metabolism between both species, this invasion can have significant biogeochemical implications, namely in terms of metal speciati...

Variations in otolith elemental composition are widely used to reconstruct fish movements. However, reconstructing habitat use and environmental histories of fishes within estuaries is still a major challenge due to the dynamic nature of these coastal environments. In this study, we performed a laboratory experiment to investigate the effects of va...

We characterized the transport pathways of pharmaceuticals released from wastewater outfalls in one of Europe's largest estuarine systems (Tagus estuary, Portugal), to identify areas of ecological relevance prone to environmental degradation due to increased exposure to these emerging contaminants. Particle source, Lagrangian trajectories and arriv...

Pharmaceutical compounds are continuously released into the aquatic environment, resulting in their ubiquitous presence in many estuarine and coastal systems. As pharmaceuticals are designed to produce effects at very low concentrations and target specific evolutionary conserved pathways, there are growing concerns over their potential deleterious...

Reconstructing movements and environmental histories of sharks may be possible by using the element composition of vertebrae, but unlocking such possibilities requires an understanding of the effects of extrinsic and intrinsic factors on element composition. We assessed water temperature and pH effects (independently and in combination) on vertebra...

Antidepressants such as fluoxetine are frequently detected in estuaries and can have profound effects on non-target organisms by interfering with the neural system and affecting essential physiological processes and behaviours. In this context, short-term effects of fluoxetine exposure were analysed in the common goby Pomatoschistus microps, an est...