
Paolo Zaffino- PhD
- Assistant Professor at Magna Graecia University
Paolo Zaffino
- PhD
- Assistant Professor at Magna Graecia University
About
81
Publications
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Introduction
Paolo Zaffino works as a Tenure-track Bioengineering Assistant Professor at the Magna Graecia University of Catanzaro. His research field is about medical image processing for image-guided surgery, in particular for radiotherapy and proton therapy.
In his career, Paolo Zaffino studied and developed algorithms for deformable image registration, multi-atlas-based segmentation, image translation, radiomics, and artificial intelligence applied to medical images.
Current institution
Additional affiliations
Education
April 2012 - March 2015
October 2009 - October 2011
October 2006 - October 2009
Publications
Publications (81)
Purpose
Identifying and quantifying coronary artery calcification (CAC) is crucial for preoperative planning, as it helps to estimate both the complexity of the 2D coronary angiography (2DCA) procedure and the risk of developing intraoperative complications. Despite the relevance, the actual practice relies upon visual inspection of the 2DCA image...
Binge eating disorder (BED) carries a 6 times higher risk for obesity and accounts for roughly 30% of type 2 diabetes cases. Timely identification of early glycemic disturbances and comprehensive treatment can impact on the likelihood of associated metabolic complications and the overall outcome. In this study, machine learning techniques were appl...
In recent years, synthetic Computed Tomography (CT) images generated from Magnetic Resonance (MR) or Cone Beam Computed Tomography (CBCT) acquisitions have been shown to be comparable to real CT images in terms of dose computation for radiotherapy simulation. However, until now, there has been no independent strategy to assess the quality of each s...
The generation of Synthetic Computed Tomography (sCT) images has become a pivotal methodology in modern clinical practice, particularly in the context of Radiotherapy (RT) treatment planning. The use of sCT enables the calculation of doses, pushing towards Magnetic Resonance Imaging (MRI) guided radiotherapy treatments. Moreover, with the introduct...
Background
Extraction of mandibular third molars (M3Ms) is a routine procedure in oral and maxillofacial surgery, often associated with postoperative symptoms like pain, facial swelling, and trismus. This study aimed to introduce a standardized and automated protocol for swelling analysis following M3M surgery, presenting results regarding clinical...
Background:
Longitudinal Displacement (LD) is the relative motion of the intima-media upon adventitia of the arterial wall during the cardiac cycle, probably linked to atherosclerosis. It has a direction, physiologically first backward in its main components with respect to the arterial flow. Here, LD was investigated in various disease and in pre...
Background and Objectives:
Genome-scale metabolic networks (GEMs) represent a valuable modeling and computational tool in the broad field of systems biology. Their ability to integrate constraints and high-throughput biological data enables the study of intricate metabolic aspects and processes of different cell types and conditions. The past decad...
Binge eating disorder (BED) carries a 6 times higher risk for obesity and accounts for roughly 30% of type 2 diabetes cases. Timely identification of early glycemic disturbances and comprehensive treatment can impact on the likelihood of associated metabolic complications and the overall outcome. Machine learning (ML) techniques were trained with s...
Aim
Hepato-renal index (HRI) calculated by ultrasound images has been shown to be an effective, noninvasive tool to screen patients with steatosis. The aim of this study was to non-invasively explore a new method for the calculation, directly on DICOM images, of HRI in pediatric patients using 3D Slicer, a free and open-source software for medical...
Artificial intelligence (AI) is changing our clinical practice. This is particularly true in cardiology where the clinician is often required to handle a large amount of clinical, biological, and imaging data during decision making. In this context, AI can address the need for fast and accurate tools while reducing the burden on clinicians and impr...
Background
The global coronavirus disease 2019 (COVID-19) pandemic has posed substantial challenges for healthcare systems, notably the increased demand for chest computed tomography (CT) scans, which lack automated analysis. Our study addresses this by utilizing artificial intelligence-supported automated computer analysis to investigate lung invo...
Simulation models and artificial intelligence (AI) are largely used to address healthcare and biomedical engineering problems. Both approaches showed promising results in the analysis and optimization of healthcare processes. Therefore, the combination of simulation models and AI could provide a strategy to further boost the quality of health servi...
A minimally-invasive manipulator characterized by hyper-redundant kinematics and embedded sensing modules is presented in this work. The bending angles (tilt and pan) of the robot tip are controlled through tendon-driven actuation; the transmission of the actuation forces to the tip is based on a Bowden-cable solution integrating some channels for...
Background: The current study aimed to investigate the distribution and extent of lung involvement in patients with COVID-19, assess the relationship between lung involvement and the need for intensive care unit (ICU) admission and compare the performance of computer analysis with the judgment of radiological experts.
Methods: A total of 81 patient...
Background: The current study aimed to investigate the distribution and extent of lung involvement in patients with COVID-19, assess the relationship between lung involvement and the need for intensive care unit (ICU) admission and compare the performance of computer analysis with the judgment of radiological experts.
Methods: A total of 81 patient...
Background: The current study aimed to investigate the distribution and extent of lung involvement in patients with COVID-19, assess the relationship between lung involvement and the need for intensive care unit (ICU) admission and compare the performance of computer analysis with the judgment of radiological experts.
Methods: A total of 81 patient...
Background: The current study aimed to investigate the distribution and extent of lung involvement in patients with COVID-19, assess the relationship between lung involvement and the need for intensive care unit (ICU) admission and compare the performance of computer analysis with the judgment of radiological experts.
Methods: A total of 81 patient...
Background: The aim of the current study was to investigate the distribution and extent of lung involvement in patients with COVID-19 with AI-supported, automated computer analysis and to assess the relationship between lung involvement and the need for intensive care unit (ICU) admission. A secondary aim was to compare the performance of computer...
Primary Central Nervous System Lymphoma (PCNSL) is an aggressive neoplasm with a poor prognosis. Although therapeutic progresses have significantly improved Overall Survival (OS), a number of patients do not respond to HD–MTX-based chemotherapy (15–25%) or experience relapse (25–50%) after an initial response. The reasons underlying this poor respo...
Background
Time‐resolved 4D cone beam–computed tomography (4D‐CBCT) allows a daily assessment of patient anatomy and respiratory motion. However, 4D‐CBCTs suffer from imaging artifacts that affect the CT number accuracy and prevent accurate proton dose calculations. Deep learning can be used to correct CT numbers and generate synthetic CTs (sCTs) t...
The assessment of vascular complexity in the lower limbs provides relevant information about peripheral artery occlusive diseases (PAOD), thus fostering improvements both in therapeutic decisions and prognostic estimation. The current clinical practice consists of visually inspecting and evaluating cine-angiograms of the interested region, which is...
In this study, we investigated whether radiomics features can improve outcome prediction in patients with Primary Central Nervous System Lymphoma (PCNSL). 80 patients diagnosed with PCNSL were enrolled. Of these, 56 patients with complete Magnetic Resonance Imaging (MRI) series (including T1-weighted, T2-weighted, 3D-T1 with gadolinium, and FLAIR)...
Coronary Angiography (CA) is the standard of reference to diagnose coronary artery disease. Yet, only a portion of the information it conveys is usually used. Quantitative Coronary Angiography (QCA) reliably contributes to improving the measurable assessment of CA. In this work, we developed a new software, CoroFinder, able to automatically identif...
Microarray is a powerful technology that enables the monitoring of expression levels for thousands of genes simultaneously, providing scientists with a full overview about DNA and RNA investigation. The process is made of three main phases: interaction with biological samples, data extraction, and data analysis. In particular, the data extraction p...
Purpose
Adaptive proton therapy (APT) of lung cancer patients requires frequent volumetric imaging of diagnostic quality. Cone‐beam CT (CBCT) can provide these daily images, but x‐ray scattering limits CBCT‐image quality and hampers dose calculation accuracy. The purpose of this study was to generate CBCT‐based synthetic CTs using a deep convolutio...
Recently,deep learning (DL)‐based methods for the generation of synthetic computed tomography (sCT) have received significant research attention as an alternative to classical ones. We present here a systematic review of these methods by grouping them into three categories, according to their clinical applications: (i) to replace computed tomograph...
The coronavirus disease 19 (COVID-19) pandemic is having a dramatic impact on society and healthcare systems. In this complex scenario, lung computerized tomography (CT) may play an important prognostic role. However, datasets released so far present limitations that hamper the development of tools for quantitative analysis. In this paper, we prese...
Background
This study aims to examine the underlying associations between eating, affective and metacognitive symptoms in patients with binge eating disorder (BED) through network analysis (NA) in order to identify key variables that may be considered the target for psychotherapeutic interventions.
Methods
A total of 155 patients with BED complete...
Recently, deep learning (DL)-based methods for the generation of synthetic computed tomography (sCT) have received significant research attention as an alternative to classical ones. We present here a systematic review of these methods by grouping them into three categories, according to their clinical applications: I) to replace CT in magnetic res...
Cone-beam computed tomography (CBCT)- and magnetic resonance (MR)-images allow a daily observation of patient anatomy but are not directly suited for accurate proton dose calculations. This can be overcome by creating synthetic CTs (sCT) using deep convolutional neural networks. In this study, we compared sCTs based on CBCTs and MRs for head and ne...
Background: This study aims to examine the underlying associations between eating, affective and metacognitive symptoms in patients with binge eating disorder (BED) through network analysis (NA), in order to identify key variables that may be considered the target for psychotherapeutic interventions.
Methods: One hundred and fifty-five patients wit...
Background: This study aims to examine the underlying associations between eating, affective and metacognitive symptoms in patients with binge eating disorder (BED) through network analysis (NA), in order to identify key variables that may be considered the target for psychotherapeutic interventions.
Methods: One hundred and fifty-five patients wit...
Interaction between medical image platform and external environment is a desirable feature in several clinical, research, and educational scenarios. In this work, the integration between 3D Slicer package and Arduino board is introduced, enabling a simple and useful communication between the two software/hardware platforms. The open source extensio...
With the advent of Minimally Invasive Surgery (MIS), intra-operative imaging has become crucial for surgery and therapy guidance, allowing to partially compensate for the lack of information typical of MIS. This paper reviews the advancements in both classical (i.e. ultrasounds, X-ray, optical coherence tomography and magnetic resonance imaging) an...
In-room imaging is a prerequisite for adaptive proton therapy. The use of onboard cone-beam computed tomography (CBCT) imaging, which is routinely acquired for patient position verification, can enable daily dose reconstructions and plan adaptation decisions. Image quality deficiencies though, hamper dose calculation accuracy and make corrections o...
The intricate relationships between innate immunity and brain diseases raise increased interest across the wide spectrum of neurodegenerative and neuropsychiatric disorders. Barriers, such as the blood–brain barrier, and innate immunity cells such as microglia, astrocytes, macrophages, and mast cells are involved in triggering disease events in the...
Radiation therapy is one of the most important strategies for treating patients with tumor. The rationale is to deliver high radiation doses to the tumor in order to damage its DNA while sparing, at the same time, healthy tissues. In order to optimize such a process, biomedical images play a fundamental role; in particular, Magnetic Resonance (MR)...
External-beam radiotherapy followed by High Dose Rate (HDR) brachytherapy is the standard-of-care for treating gynecologic cancers. The enhanced soft-tissue contrast provided by Magnetic Resonance Imaging (MRI) makes it a valuable imaging modality for diagnosing and treating these cancers. However, in contrast to Computed Tomography (CT) imaging, t...
Purpose:
The first aim of this work is to present a novel deep convolution neural network (DCNN) multiplane approach and compare it to single-plane prediction of synthetic computed tomography (sCT) by using the real computed tomography (CT) as ground truth. The second aim is to demonstrate the feasibility of magnetic resonance imaging (MRI)-based...
The data of literature are discordant about the role of mast cells in different types of neoplasms. In this paper the authors propose the hypothesis that tumor-associated mast cells may switch to different polarization states, conditioning the immunogenic capacities of the different neoplasms. Anti-inflammatory polarized mast cells should express c...
Purpose
In radiation therapy, a key step for a successful cancer treatment is image-based treatment planning. One objective of the planning phase is the fast and accurate segmentation of organs at risk and target structures from medical images. However, manual delineation of organs, which is still the gold standard in many clinical environments, is...
Recent studies have clarified many still unknown aspects related to innate immunity and the blood-brain barrier relationship. They have also confirmed the close links between effector immune system cells, such as granulocytes, macrophages, microglia, natural killer cells and mast cells, and barrier functionality. The latter, in turn, is able to inf...
The assessment of vascular complexity in the lower limbs provides important information about peripheral artery diseases, with a relevant impact on both therapeutic decisions and on prognostic estimation. Currently, the evaluation is carried out by visual inspection of cine-angiograms, which is largely operator-dependent. An automatic image analysi...
Multi Atlas Based Segmentation (MABS) uses a database of atlas images, and an atlas selection process is used to choose an atlas subset for registration and voting. In the current state of the art, atlases are chosen according to a similarity criterion between the target subject and each atlas in the database. In this paper, we propose a new concep...
Multi Atlas Based Segmentation (MABS) uses a database of atlas images, and an atlas selection process is used to choose an atlas subset for registration and voting. In the current state of the art, atlases are chosen according to a similarity criterion between the target subject and each atlas in the database. In this paper, we propose a new concep...
Purpose:
Automated delineation of structures and organs is a key step in medical imaging. However, due to the large number and diversity of structures and the large variety of segmentation algorithms a consensus is lacking as to which automated segmentation method works best for certain applications. Segmentation challenges are a good approach for...
Objectives:
Atlas-based automatic segmentation (ABAS) addresses the challenges of accuracy and reliability in manual segmentation. We aim to evaluate the contribution of specific-purpose in ABAS of breast cancer (BC) patients with respect to generic-purpose libraries.
Materials and methods:
One generic-purpose and 9 specific-purpose libraries, s...
During the last years Deep Learning and especially Convolutional Neural Networks (CNN) have set new standards for different computer vision tasks like image classification and semantic segmentation. In this paper, a CNN for 3D volume segmentation based on recently introduced deep learning components will be presented. In addition to using image pat...
Purpose:
Multiatlas based segmentation is largely used in many clinical and research applications. Due to its good performances, it has recently been included in some commercial platforms for radiotherapy planning and surgery guidance. Anyway, to date, a software with no restrictions about the anatomical district and image modality is still missing...
Purpose:In this work we present the validation of Plastimatch MABS, an open source software for multi atlas based segmentation of medical images.
Methods:The validation was performed on two different clinical datasets: 1) 25 CT image volumes of patients treated for H&N cancer; 2) 20 MRI series of patients having a neurological diagnosis. For the fi...
To improve the contouring of clinical target volume for the radiotherapy of neck Hodgkin/non-Hodgkin lymphoma by localizing the prechemotherapy gross target volume onto the simulation computed tomography using [(18)F]-fluorodeoxyglucose positron emission tomography/computed tomography.
The gross target volume delineated on prechemotherapy [(18)F]-f...
Automated segmentation is a frequently applied task in the course of medical imaging. Furthermore, it is a substantial component of image-guided radiotherapy. Atlas based segmentation is one of the most frequently used approach for automated segmentation. Especially for multi-atlas based segmentation, segmentation quality and speed largely depends...
Purpose
To obtain a contrasted image of the tumor region during the setup for proton therapy in lung patients, by using proton radiography and x-ray computed tomography (CT) prior knowledge.
Methods and Materials
Six lung cancer patients' CT scans were preprocessed by masking out the gross tumor volume (GTV), and digitally reconstructed radiograph...
Accurate delineation of organs at risk (OARs) is a precondition for intensity modulated radiation therapy. However, manual delineation of OARs is time consuming and prone to high interobserver variability. Because of image artifacts and low image contrast between different structures, however, the number of available approaches for autosegmentation...
Purpose/Objective: The aim of this work is to design and test different
atlas selection strategies to optimize multi atlas based segmentation
(MABS). The methodology was implemented and evaluated in the
framework of head and neck radiotherapy to allow automatic contouring
of OARs.
Materials and Methods: MABS methods require the availability of...