Nur Syatila Ab Ghani

Nur Syatila Ab Ghani
Universiti Kebangsaan Malaysia | ukm · Institute of Systems Biology (INBIOSIS)

Doctor of Philosophy

About

8
Publications
1,120
Reads
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29
Citations
Citations since 2016
8 Research Items
29 Citations
201620172018201920202021202202468101214
201620172018201920202021202202468101214
201620172018201920202021202202468101214
201620172018201920202021202202468101214
Introduction
Interested in structural bioinformatics, programming and database development.
Additional affiliations
December 2019 - present
Universiti Kebangsaan Malaysia
Position
  • Research Officer
Description
  • Involved in various research activities related to Systems Biology.
February 2016 - May 2019
Universiti Kebangsaan Malaysia
Position
  • PhD Student
Description
  • Involved in research activities related to structural bioinformatics especially on the protein structure analyses and development of computational pipelines using various algorithms and programming languages.
Education
September 2011 - September 2015
International Islamic University Malaysia
Field of study
  • Health Sciences

Publications

Publications (8)
Article
Full-text available
The GrAfSS (Graph theoretical Applications for Substructure Searching) webserver is a platform to search for three-dimensional substructures of: (i) amino acid side chains in protein structures; and (ii) base arrangements in RNA structures. The webserver interfaces the functions of five different graph theoretical algorithms - ASSAM, SPRITE, IMAAAG...
Article
Full-text available
Nepenthes is a genus comprising carnivorous tropical pitcher plants that have evolved trapping organs at the tip of their leaves for nutrient acquisition from insect trapping. Recent studies have applied proteomics approaches to identify proteins in the pitcher fluids for better understanding the carnivory mechanism, but protein identification is h...
Article
Full-text available
Structures of protein-drug-complexes provide an atomic level profile of drug-target interactions. In this work, the three-dimensional arrangements of amino acid side chains in known drug binding sites (substructures) were used to search for similarly arranged sites in SARS-CoV-2 protein structures in the Protein Data Bank for the potential repositi...
Article
Full-text available
A common drug repositioning strategy is the re-application of an existing drug to address alternative targets. A crucial aspect to enable such repurposing is that the drug's binding site on the original target is similar to that on the alternative target. Based on the assumption that proteins with similar binding sites may bind to similar drugs, th...
Article
Full-text available
Abstrak: Burkholderia pseudomallei berkebolehan untuk hidup dalam keadaan dorman dalam badan manusia dan berupaya menyebabkan penyakit melioidosis yang laten. Dalam penyelidikan ini, struktur alfa-kristallin B. pseudomallei telah dimodelkan menggunakan tiga kaedah ramalan i) secara perbandingan homologi ii) secara threading atau pengecaman lipatan...
Conference Paper
The three-dimensional structure of a protein can provide insights regarding its function. Functional relationship between proteins can be inferred from fold and sequence similarities. In certain cases, sequence or fold comparison fails to conclude homology between proteins with similar mechanism. Since the structure is more conserved than the seque...

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