Noa Simon-Blecher

• PhD
• Bar Ilan University

Coral reefs are biodiversity hotspots, where new species continue to be discovered. Stylophora pistillata, a depth-generalist coral, is widely distributed throughout the Indo-Pacific and has long been considered the poster child for phenotypic plasticity. It occupies a wide range of reef habitats and exhibits a myriad of gross morphologies. Here, w...

Coral reefs, known for their remarkable diversity, serve a pivotal function in modulating the global oceanic carbon cycle and act as natural barriers that protect coastlines from erosion and storm surges by dissipating wave energy. Despite their importance, their sensitivity to temperature fluctuations, sea‐level shifts and anthropogenic changes in...

Organismal communities associated with coral reefs, particularly invertebrates and microbes, play crucial roles in ecosystem maintenance and coral health. Here, we characterized the organismal composition of a healthy, non-urbanized reef (Site A) and a degraded, urbanized reef (Site B) in the Gulf of Eilat/Aqaba, Red Sea to assess its impact on cor...

The circadian clock enables anticipation of the day/night cycle in animals ranging from cnidarians to mammals. Circadian rhythms are generated through a transcription-translation feedback loop (TTFL or pacemaker) with CLOCK as a conserved positive factor in animals. However, CLOCK’s functional evolutionary origin and mechanism of action in basal an...

The circadian clock enables anticipation of the day/night cycle in animals ranging from cnidarians to mammals. Circadian rhythms are generated through a transcription-translation feedback loop (TTFL or pacemaker) with CLOCK as a conserved positive factor in animals. However, CLOCK’s functional evolutionary origin and mechanism of action in basal an...

The circadian clock enables anticipation of the day/night cycle in animals ranging from cnidarians to mammals. Circadian rhythms are generated through a transcription-translation feedback loop (TTFL or pacemaker) with CLOCK as a conserved positive factor in animals. However, the functional evolutionary origin and mechanism of action of CLOCK in bas...

The circadian clock enables anticipation of the day/night cycle in animals ranging from cnidarians to mammals. Circadian rhythms are generated through a transcription-translation feedback loop (TTFL) involving negative and positive factors. CLOCK is a central conserved positive factor in the animal kingdom. However, the functional evolutionary orig...

The circadian clock enables anticipation of the day/night cycle in animals ranging from cnidarians to mammals. Circadian rhythms are generated through a transcription-translation feedback loop (TTFL) involving negative and positive factors. CLOCK is a central conserved positive factor in the animal kingdom. However, the functional evolutionary orig...

The distribution of the intertidal barnacle Chthamalus montagui spans the West Mediterranean Sea and the Northeast Atlantic shores of Europe and West Africa. Knowledge of the phylogeography of this species has been limited to the Mediterranean and the European shores of the Atlantic. The present study con- siders the populations of West Europe, but...

The circadian clock is a crucial biological mechanism that enables organisms to anticipate the daily light/dark cycle. While the circadian clock factors underlying the molecular mechanism were characterized in a few model organisms, the evolutionary functional origin of the core clock proteins is unclear. In cnidarians, the expression of the putati...

The stalked barnacles Minyaspis faroni associated with antipatharians known from the southern Red Sea have been recently recorded in the northern Red Sea. Two genera of oxynaspids, Oxyaspis and Minyaspis, differ morphologically in the coverage of the capitulum. In Oxyaspis, the capitulum is covered by calcified plates, whereas in Minyaspis, the pla...

Quantifying coral reef biodiversity is challenging for cryptofauna and organisms in early life stages. We demonstrate the utility of eDNA metabarcoding as a tool for comprehensively evaluating invertebrate communities on complex 3D structures for reef reformation, and the role these structures play in provisioning habitat for organisms. 3D design a...

Coral reefs are in global decline due to climate change and anthropogenic influences (Hughes et al., Conservation Biology, 27: 261–269, 2013). Near coastal cities or other densely populated areas, coral reefs face a range of additional challenges. While considerable progress has been made in understanding coral responses to acute individual stresso...

Urbanized coral reefs are often chronically affected by sedimentation and reduced light levels, yet many species of corals appear to be able to thrive under these highly disturbed conditions. Recently, these marginal ecosystems have gained attention as potential climate change refugia due to the shading effect of suspended sediment, as well as pote...

The intertidal barnacle Chthamalus stellatus has a broad distribution, occurring in the Mediterranean, the east Atlantic shores and east Atlantic Macaronesian Islands (Madeira, the Canaries and the Azores). Traditionally, based on morphological characters, Chthamalus of the Cape Verde Islands were also regarded as C. stellatus. However, using a mit...

Genetic population patterns in coral reefs are important for understanding biodiversity and forecasting recovery following disturbance. Studying gene flow between small and disrupted marine ecosystems, such as the reefs along the Singapore Strait, is especially crucial due to their fragile nature. Here we sampled the ubiquitous coral species comple...

Poli's stellate barnacle, Chthamalus stellatus Poli, populates the Mediterranean Sea, the NorthEastern Atlantic coasts, and the offshore Eastern Atlantic islands. Previous studies have found apparent genetic differences between the Atlantic and the Mediter-ranean populations of C. stellatus, suggesting possible geological and oceanographic explanat...

Organisms’ survival is associated with the ability to respond to natural or anthropogenic environmental stressors. Frequently, these responses involve changes in gene regulation and expression, consequently altering physiology, development, or behavior. Here, we present modifications in response to heat exposure that mimics extreme summertime field...

Barnacles of the genus Chthamalus are commonly encountered rocky intertidal shores. The phylogeography of the different species in the Western Indian Ocean is unclear. Using morphological characteristics as well as the molecular markers mitochondrial cytochrome oxygenase subunit I (COI) and the nuclear sodium-potassium ATPase (NaKA), we identified...

Barnacles that fit morphologically into the description of the pyrgomatid genus Cantellius were retrieved from hydrozoan Stylasteridae. The use of molecular markers also confirmed the assignment of these barnacles to the genus Cantellius. Hitherto, stylasterids have not been recorded as hosts of pyrgomatids. This finding conflicts with and refutes...

Barnacles that fit morphologically into the description of the pyrgomatid genus Cantellius were retrieved from hydrozoan Stylasteridae. The use of molecular markers also confirmed the assignment of these barnacles to the genus Cantellius. Hitherto, stylasterids have not been recorded as hosts of pyrgomatids. This finding conflicts with and refutes...

The intertidal barnacle Chthamalus stellatus has a broad distribution, occurring in the Mediterranean, the east Atlantic shores and east Atlantic Macaronesian Islands (Madeira, the Canaries and the Azores). Traditionally, based on morphological characters, Chthamalus of the Cape Verde Islands were also regarded as C. stellatus. However, using a mit...

A correction to this article has been published and is linked from the HTML and PDF versions of this paper. The error has been fixed in the paper.

The biogeography of marine species along the African coast line is one of the least known in the world. In order to understand the genetic structure and quantify levels of population divergence of benthic populations along these coasts, we used species of broadcast-spawning intertidal barnacles of the genus Chthamalus as models. We studied the popu...

Background Aquatic subterranean species often exhibit disjunct distributions, with high level of endemism and small range, shaped by vicariance, limited dispersal, and evolutionary rates. We studied the disjunct biogeographic patterns of an endangered blind cave shrimp, Typhlocaris , and identified the geological and evolutionary processes that hav...

Table S2. GenBank accession numbers of Typhlocaris.

Table S1. List of the primers used for gene amplification in this study and PCR profiles.

Species of the genus Spirobranchus, commonly known as Christmas tree worms, are abundant throughout tropical Indo-Pacific and Atlantic Oceans. Information on the species inhabiting the Red Sea in general and the Gulf of Eilat (Gulf of Aqaba) in particular, has so far been very limited. Here we present a multigene phylogenetic analysis, examining bo...

Intertidal inhabitants are exposed to the 24-hour solar day, and the 12.4 hour rising and falling of the tides. One or both of these cycles govern intertidal organisms’ behaviour and physiology, yet little is known about the molecular clockworks of tidal rhythmicity. Here, we show that the limpet Cellana rota exhibits robust tidally rhythmic behavi...

List of the primers used for gene amplification in this study and PCR profiles

GenBank accession numbers of Typhlocaris

Background. Aquatic subterranean species often exhibit disjunct distributions, with high level of endemism and small range, shaped by vicariance, limited dispersal, and evolutionary rates. We studied the disjunct biogeographic patterns of an endangered blind cave shrimp, Typhlocaris, and identified the geological and evolutionary processes that hav...

Background. Aquatic subterranean species often exhibit disjunct distributions, with high level of endemism and small range, shaped by vicariance, limited dispersal, and evolutionary rates. We studied the disjunct biogeographic patterns of an endangered blind cave shrimp, Typhlocaris , and identified the geological and evolutionary processes that ha...

Fluorescent-amplified fragment length polymorphism (FAFLP) fingerprinting assay was used to compare the genetic diversity within and between tadpole shrimps (Notostraca) populations of Lepidurus apus (n=7) and Triops cancriformis (n=2) from rain pools in Israel. Each ephemeral water body has revealed a unique fingerprint pattern with an entailed ge...

Barnacles of the genus Galkinius occupy a large spectrum of host corals, making it one of the least host-specific genera within the Pyrgomatidae. Molecular analyses show that within the genus Galkinius there are highly supported clades, suggesting that the genus Galkinius is a complex of evolutionarily significant units (ESUs). The morphology of th...

Endogenous circadian clocks are poorly understood within early-diverging animal lineages. We have characterized circadian behavioral patterns and identified potential components of the circadian clock in the starlet sea anemone, Nematostella vectensis: a model cnidarian which lacks algal symbionts. Using automatic video tracking we showed that Nema...

Endogenous circadian clocks are poorly understood within early-diverging animal lineages. We have characterized circadian behavioral patterns and identified potential components of the circadian clock in the starlet sea anemone, Nematostella vectensis: a model cnidarian which lacks algal symbionts. Using automatic video tracking we showed that Nema...

The coral-inhabiting barnacle Pyrgopsella annandalei was collected in 1888 off the reefs of the Andaman Islands in the Indian Ocean, diagnosed in 1906, and described in full in 1907. Since then, this barnacle has not been recorded. In 2006, several specimens of Pyrgopsella were found embedded in the hermatypic coral Symphyllia radians. Based on mor...

Barnacles of the superfamily Coronuloidea are obligate epibionts of various marine mammals, marine reptiles and large crustaceans. We used five molecular markers: 12S rDNA, 16S rDNA, 18S rDNA, 28S rDNA and Histone 3 to infer phylogenetic relationships among sixteen coronuloids, representing most of the recent genera of barnacles of this superfamily...

ABSTRACT: This study addressed the hypothesis that the lack of genetic variation among populations of the barnacle Chthamalus stellatus, detected in previous phylogeographic studies, is due to the limitations of the selected markers. We developed novel markers for this species based on 2 mitochondrial sequences, i.e. a 640 bp fragment of NADH dehyd...

Darwin recognized the coral inhabiting barnacles as congeneric belonging to Pyrgoma. Ross and Newman (1973) assigned those with fused shell and elongated scuta to the genus Savignium. Later those with tooth like articular projection on tergum were assigned to Trevathana dentata. We sequenced and analyzed the divergence of three mithochondrial genes...

The three chthamalids Chthamalus stellatus, C. montagui and Euraphia depressa are common inhabitants of the intertidal zone in the Eastern Atlantic, Mediterranean Sea and Black Sea. In this study, we investigated the occurrence of these barnacles in a wide range of their distribution. Population divergences of these two species have been inferred u...

The symbiotic association between corals and zooxanthellae has been a major contributing factor in the success of reef‐building corals. The diversity of zooxanthellae harboured in the hermatypic coral Stylophora pistillata in the Gulf of Eilat (Aqaba), northern Red Sea, was investigated on the basis of the length and sequence variation of the 18S s...

We report the occurrence of the North-East Pacific intertidal barnacle Balanus glandula in the south-western African shores of the Atlantic Ocean. In addition, an attempt is made to trace the origin of the South African population by comparing the distribution of haplotype groups of two molecular markers, cytochrome oxidase subunit I (COI) and elon...

The traditional phylogeny of the coral-inhabiting barnacles, the Pyrgomatidae, is based on morphological characteristics, mainly of the hard parts. It has been difficult to establish the phylogenetic relationships among Pyrgomatidae because of the apparent convergence of morphological characteristics, and due to the use of non-cladistic systematics...

Embryogenesis and asexual reproduction are commonly considered to be coordinated developmental processes, which depend on accurate progression through a defined sequence of developmental stages. Here we report a peculiar developmental scenario in a simple chordate, Botryllus schlosseri, wherein a normal colony of individuals (zooids and buds) is re...

A new species of coral-inhabiting barnacle, Pyrgopsella youngi, is described. It was found in a colony of the coral Symphyllia radians Milne Edwards & Haime, 1849 from Sulawesi, Indonesia. The barnacles were suspended in the coral tissue and were easily detached. A unique feature of Pyrgopsella is its membranous basis; in P. youngi the calcareous b...

Coral bleaching is caused by the loss of symbiont zooxanthellae and/or decrease in their pigments. Since the algal symbionts provide the energy basis for corals and whole reefs, their loss or impairment of function leads to widespread mortality. This phenomenon has been documented numerous times in recent years, and has extensively damaged coral re...

The external peripheral termini of vasculature in botryllid ascidians (ampullae) are important in the expression of effector mechanisms during histocompatibility reactions. We study here morphological changes to the microstructure during allorecognition in Botrylloides subpopulation I (SP1) from the Mediterranean coast of Israel, where special gian...

If fulminate rejection in allogeneic and xenogeneic engraftments is not an evolutionary relict feature, then any treatment that ablates the host surveillance's effector arms capabilities and eliminates graft vs. host reactivity should induce donor chimerism in transplant settings. We demonstrate here marked proliferative response of Botryllus (Uroc...

Individuals of the pit crabs Cryptochirus coralliodytes Heller inhabit massive corals of the family Faviidae. Their pit walls were observed to be covered by blue-green algae and fungi. We suggest that the crabs enhance the growth of these algae and fungi with their metabolic excretions, which contain ammonium. The endolithic algae and the fungi may...

Individuals of the pit crabs Cryptochirus coralliodytes Heller inhabit massive corals of the family Faviidae. The nature of the association between Cryptochirus crabs and their host corals has not been studied thoroughly. In the coral reef in Elat (Red Sea), at depths of 2–7 m, the crabs inhabit about 25% of faviid corals of the genera Favia, Favit...

The spatial distribution of chlorophyll in three coral species carrying invertebrate symbionts was determined using spectral imaging techniques. From each pixel of the image, full fluorescence spectral data was obtained as well as comparative ratios of fluorescence. The multipixel fluorescence map and the relative-intensity fluorescence ratios demo...