Meijun Chen

Meijun Chen
Southern Medical University | FIMMU · School of Basic Medical Science

Bachelor of Science

About

7
Publications
1,797
Reads
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424
Citations
Introduction
Currently doing research in Bioinformatics and Metagenomics.
Skills and Expertise
Additional affiliations
July 2019 - July 2020
Guangdong Regenerative and Medicine Health Guangdong Laboratory
Position
  • Fellow
Description
  • Perform scATAC-Seq libraries with ICELL8 cx system
Education
September 2015 - June 2019
Soochow University (PRC)
Field of study
  • Biological Scienses

Publications

Publications (7)
Preprint
The data output from microbiome research is growing at an accelerating rate, yet mining the data quickly and efficiently remains difficult. There is still a lack of effective data structure to represent and manage data, as well as flexible and composable analysis methods. In response to these two issues, we designed and developed the MicrobiotaProc...
Article
Full-text available
With the rapid increase of large-scale datasets, biomedical data visualization is facing challenges. The data may be large, have different orders of magnitude, contain extreme values, and the data distribution is not clear. Here we present an R package ggbreak that allows users to create broken axes using ggplot2 syntax. It can effectively use the...
Article
Full-text available
Functional enrichment analysis is pivotal for interpreting high-throughput omics data in life science. It is crucial for this type of tools to use the latest annotation databases for as many organisms as possible. To meet these requirements, we present here an updated version of our popular Bioconductor package, clusterProfiler 4.0. This package ha...
Article
Full-text available
We present the ggtreeExtra package for visualizing heterogeneous data with a phylogenetic tree in a circular or rectangular layout (https://www.bioconductor.org/packages/ggtreeExtra). The package supports more data types and visualization methods than other tools. It supports using the grammar of graphics syntax to present data on a tree with richl...
Preprint
Full-text available
We present the ggtreeExtra package for visualizing heterogeneous data with a phylogenetic tree (https://www.bioocnductor.org/packages/ggtreeExtra). It supports more data types and visualization methods than other tools and has many features that are not available elsewhere. The ggtreeExtra package is a universal tool for tree data visualization. It...
Preprint
Full-text available
We present the ggtreeExtra package for visualizing heterogeneous data with a phylogenetic tree (https://www.bioconductor.org/packages/ggtreeExtra). It supports more data types and visualization methods than other tools and has many features that are not available elsewhere. The ggtreeExtra package is a universal tool for tree data visualization. It...
Article
Folate metabolism pathway is mainly associated with syntheses of nucleic acids and proteins as well as DNA methylation and repair. Cytoplasmic C1 tetrahydrofolate (C1-THF) synthase is a central enzyme in folate metabolism and plays an important role in C1-THF conversion. The full-length sequence of silkworm (Bombyx mori) cytoplasmic C1-THF synthase...

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