Mauricio Girardi-SchappoUniversidade Federal de Santa Catarina | UFSC · Center of Physics and Mathematical Sciences
Mauricio Girardi-Schappo
PhD in Physics
Working on the navigation and localization system in the hippocampus, figuring out the role of adaptation in memory.
About
47
Publications
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Introduction
I support the synergy between modeling and experimentation in Neuroscience. Experimentation informs model development and validates the reliable ones that accurately describe natural phenomena. Modeling, on the other hand, is an art that involves simplifying problems to uncover fundamental principles underlying empirical observations. My research focus at this intersection.
Additional affiliations
Education
March 2012 - March 2016
March 2010 - March 2012
May 2006 - February 2010
Publications
Publications (47)
Any minimally functional brain has two fundamental features: structure and activity, each of which is inseparably linked to the other.
Rabinowitch considers the design of a synthetic connectome departing from its long-term invariant core network.
However, it is not sufficient to build a synthetic connectome if it propagates unhealthy activity.
To h...
Recent experimental results on spike avalanches measured in the urethane-anesthetized rat cortex have revealed scaling relations that indicate a phase transition at a specific level of cortical firing rate variability. The scaling relations point to critical exponents whose values differ from those of a branching process, which has been the canonic...
Neuronal avalanches and asynchronous irregular (AI) firing patterns have been thought to represent distinct frameworks to understand the brain spontaneous activity. The former is typically present in systems where there is a balance between the slow accumulation of tension and its fast dissipation, whereas the latter is accompanied by the balance b...
Objective
Although temporal lobe epilepsy (TLE) is recognized as a system‐level disorder, little work has investigated pathoconnectomics from a dynamic perspective. By leveraging computational simulations that quantify patterns of information flow across the connectome, we tested the hypothesis that network communication is abnormal in this conditi...
A homeostatic mechanism that keeps the brain highly susceptible to stimuli and optimizes many of its functions -- although this is a compelling theoretical argument in favor of the brain criticality hypothesis, the experimental evidence accumulated during the last two decades is still not entirely convincing, causing the idea to be seemingly unknow...
Slow-fast dynamics are intrinsically related to complex phenomena, and are responsible for many of the homeostatic dynamics that keep biological systems healthfully functioning. We study a discrete-time membrane potential model that can generate a diverse set of spiking behavior depending on the choice of slow-fast time scales, from fast spiking to...
Animals navigate by learning the spatial layout of their environment. We investigated spatial learning of mice in an open maze where food was hidden in one of a hundred holes. Mice leaving from a stable entrance learned to efficiently navigate to the food without the need for landmarks. We developed a quantitative framework to reveal how the mice e...
Animals navigate by learning the spatial layout of their environment. We investigated spatial learning of mice in an open maze where food was hidden in one of a hundred holes. Mice leaving from a stable entrance learned to efficiently navigate to the food without the need for landmarks. We developed a quantitative framework to reveal how the mice e...
Animals navigate by learning the spatial layout of their environment. We investigated spatial learning of mice in an open maze where food was hidden in one of a hundred holes. Mice leaving from a stable entrance learned to efficiently navigate to the food without the need for landmarks. We developed a quantitative framework to reveal how the mice e...
Transient or partial synchronization can be used to do computations, although a fully synchronized network is sometimes related to the onset of epileptic seizures. Here, we propose a homeostatic mechanism that is capable of maintaining a neuronal network at the edge of a synchronization transition, thereby avoiding the harmful consequences of a ful...
Many human cells fire plateau action potentials, from the endocrine system to the heart. For example, cardiac myocites may present perturbations of the plateau that are linked to the long QT syndrome and cardiac arrhythmia. Here, we provide a unified and minimalist dynamic explanation for some of the known forms of the loss of stability of the plat...
Animals navigate by learning the spatial layout of their environment. We investigated spatial learning of mice in an open maze where food was hidden in one of a hundred holes. Mice leaving from a stable entrance learned to efficiently navigate to the food without the need for landmarks. We develop a quantitative framework to reveal how the mice est...
Animals navigate by learning the spatial layout of their environment. We investigated spatial learning of mice in an open maze where food was hidden in one of a hundred holes. Mice leaving from a stable entrance learned to efficiently navigate to the food without the need for landmarks. We develop a quantitative framework to reveal how the mice est...
Hilar mossy cells (hMCs) in the dentate gyrus (DG) receive inputs from DG granule cells (GCs), CA3 pyramidal cells and inhibitory interneurons, and provide feedback input to GCs. Behavioural and in vivo recording experiments implicate hMCs in pattern separation, navigation and spatial learning. Our experiments link hMC intrinsic excitability to the...
Animals navigate by learning the spatial layout of their environment. We investigated spatial learning of mice in an open maze where food was hidden in one of a hundred holes. Mice leaving from a stable entrance learned to efficiently navigate to the food without the need for landmarks. We develop a quantitative framework to reveal how the mice est...
Hilar mossy cells (hMCs) are glutamatergic neurons in the dentate gyrus (DG) that receive inputs primarily from DG granule cells (GCs), CA3 pyramidal cells and local inhibitory interneurons. The hMCs then provide direct excitatory and disynaptic inhibitory feedback input to GCs. Behavioral and in vivo single unit recording experiments have implicat...
In self-organized criticality (SOC) models, as well as in standard phase transitions, criticality is only present for vanishing external fields h→0. Considering that this is rarely the case for natural systems, such a restriction poses a challenge to the explanatory power of these models. Besides that, in models of dissipative systems like earthqua...
Foreword from the editors.
We hosted four keynote speakers: Wolf Singer, Bill Bialek, Danielle Bassett, and Sonja Gruen. They enlightened us about computations in the cerebral cortex, the reduction of high-dimensional data, the emerging field of computational psychiatry, and the significance of spike patterns in motor cortex. From the submissions,...
Neuronal avalanches and asynchronous irregular (AI) firing patterns have been thought to represent distinct frameworks to understand the brain spontaneous activity. The former is typically present in systems where there is a balance between the slow accumulation of tension and its fast dissipation, whereas the latter is accompanied by the balance b...
The field of computational modeling of the brain is advancing so rapidly that now it is possible to model large scale networks representing different brain regions with a high level of biological detail in terms of numbers of neurons and synapses. For a theoretician approaching a neurobiological question, it is important to analyze the pros and con...
Physicists are starting to work in areas where noisy signal analysis is required. In these fields, such as Economics, Neuroscience, and Physics, the notion of causality should be interpreted as a statistical measure. We introduce to the lay reader the Granger causality between two time series and illustrate ways of calculating it: a signal $X$ ``Gr...
The field of computational modeling of the brain is advancing so rapidly that now it is possible to model large scale networks representing different brain regions with a high level of biological detail in terms of numbers and synapses. For a theoretician approaching a neurobiological question, it is important to analyze the pros and cons of each o...
Physicists are starting to work in areas where noisy signal analysis is required. In these fields, such as Economics, Neuroscience, and Physics, the notion of causality should be interpreted as a statistical measure. We introduce to the lay reader the Granger causality between two time series and illustrate ways of calculating it: a signal X "Grang...
Recent experimental results on spike avalanches measured in the urethane-anesthetized rat cortex have revealed scaling relations that indicate a phase transition at a specific level of cortical firing rate variability. The scaling relations point to critical exponents whose values differ from those of a branching process, which has been the canonic...
Recent experiments suggested that a homeostatic regulation of synaptic balance leads the visual system to recover and maintain a regime of power-law avalanches. Here we study an excitatory/inhibitory (E/I) mean-field neuronal network that has a critical point with power-law avalanches and synaptic balance. When short-term depression in inhibitory s...
Recent experiments suggested that homeostatic regulation of synaptic balance leads the visual system to recover and maintain a regime of power-law avalanches. Here we study an excitatory/inhibitory (E/I) mean-field neuronal network that has a critical point with power-law avalanches and synaptic balance. When short term depression in inhibitory syn...
Nonequilibrium phase transitions are characterized by the so-called critical exponents, each of which is related to a different observable. Systems that share the same set of values for these exponents also share the same universality class. Thus, it is important that the exponents are named and treated in a standardized framework. In this comment,...
Nonequilibrium phase transitions are characterized by the so-called critical exponents, each of which is related to a different observable. Systems that share the same set of values for these exponents also share the same universality class. Thus, it is important that the exponents are named and treated in a standardized framework. In this comment,...
Asynchronous irregular (AI) and critical states are two competing frameworks proposed to explain spontaneous neuronal activity. Here, we propose a mean-field model with simple stochastic neurons that generalizes the integrate-and-fire network of Brunel (2000). We show that the point with balanced inhibitory/excitatory synaptic weight ratio $g_c \ap...
Power-law-shaped avalanche-size distributions are widely used to probe for critical behavior in many different systems, particularly in neural networks. The definition of avalanche is ambiguous. Usually, theoretical avalanches are defined as the activity between a stimulus and the relaxation to an inactive absorbing state. On the other hand, experi...
We introduce a new map-based neuron model derived from the dynamical perceptron family that has the best compromise between computational efficiency, analytical tractability, reduced parameter space and many dynamical behaviors. We calculate bifurcation and phase diagrams analytically and computationally that underpins a rich repertoire of autonomo...
Supporting information: Phase diagrams and dynamics of a computationally efficient map-based neuron model.
Details about the ISI method used to determine the OA in this paper and about the parameters of the model for each behavior depicted in Figs 7 and 8. Fig A, Typical ISI distributions. The four different types of ISI distribution P(ISI) are dis...
Activity in the brain propagates as waves of firing neurons, namely avalanches. These waves’ size and duration distributions have been experimentally shown to display a stable power-law profile, long-range correlations and 1/f b power spectrum in vivo and in vitro. We study an avalanching biologically motivated model of mammals visual cortex and fi...
We study a new biologically motivated model for the Macaque monkey primary
visual cortex which presents power-law avalanches after a visual stimulus. The
signal propagates through all the layers of the model via avalanches that
depend on network structure and synaptic parameter. We identify four different
avalanche profiles as a function of the exc...
Poster presentation at The Twenty Third Annual Computational Neuroscience Meeting: CNS*2014 Québec City, Canada. 26-31 July 2014
Many different kinds of noise are experimentally observed in the brain. Among them, we study a model of noisy chemical synapse and obtain critical avalanches for the spatiotemporal activity of the neural network. Neurons and synapses are modeled by dynamical maps. We discuss the relevant neuronal and synaptic properties to achieve the critical stat...
In this work, we present a random walk model to study the positron diffusion in gaseous media. The positron-atom interaction is described through positron-target cross sections. The main idea is to obtain how much energy a positron transfer to the environment atoms, through ionizations and electronic excitations until its annihilation, taking the r...
We investigate the synaptic noise as a novel mechanism for creating critical
avalanches in the activity of neural networks. We model neurons and chemical
synapses by dynamical maps with a uniform noise term in the synaptic coupling.
An advantage of utilizing maps is that the dynamical properties (action
potential profile, excitability properties, p...
Resumo
KTz model is a three-dimensional map representing the action potential, a recovery and a slow variable, and exhibits the usual excitable cells behaviors (fast and regular spiking, bursting, etc). When we connect KTz’s units in different topologies with a probabilistic two-dimensional Chemical Synapse Map (CSM) we obtain spike avalanches, wh...
To study neurons with computational tools, one may call upon, at least, two different approaches: (i) Hodgkin-Huxley like neurons [1] (i.e. biological neurons) and (ii) formal neurons (e.g. Hindmarsh-Rose (HR) model [2], Kinouchi-Tragtenberg (KT) model [3], etc). Formal neurons may be represented by ordinary differential equations (e.g. HR), or by...
Questions
Question (1)
In the context of biologically motivated neural networks, may I suggest the attached paper, in which me and my collaborators explore a visual system neural network and the physical nature of its processing of input signals based on the brain criticality hipothesis