Matthias C Rillig

Freie Universität Berlin | FUB · Institute of Biology

Refined conversion factors for soil fungal biomarkers are proposed. High interspecific variability is present in all fungal biomarkers. A modeling approach supports the validity of biomarker estimates in diverse soils. ITS1 copies vary strongly, but are fungal-specific with least phylogenetic bias. A combination of fungal biomarkers will reveal soi...

Background Microplastics, polymer-based particles < 5 mm, affect plant–soil systems positively or negatively, suggesting there are different modes of action. Microplastics, as particles, have physical effects but the leaching of additives likely contributes chemical mechanisms, both of which may be dependent on microplastic size. To disentangle suc...

Introduction Increasing soil organic carbon (SOC) in croplands is a natural climate mitigation effort that can also enhance crop yields. However, there is a lack of comprehensive field studies examining the impact of SOC on crop yields across wide climatic, soil, and farming gradients. Furthermore, it is largely unknown how water retention, soil mi...

The impact of microplastics on antibiotic resistance has attracted widespread attention. However, previous studies primarily focused on the effects of individual microplastics. In reality, diverse microplastic types accumulate in soil, and it remains less well studied whether microplastic diversity (i.e., variations in color, shape or polymer type)...

Biodegradable microplastics (MPs), which are starting to be used in large quantities in croplands, may affect the mineralization of soil organic carbon (SOC). These priming effects induced by biodegradable MPs are a very new issue, and their mechanisms as well as consequences for various soils are nearly unknown. Using stable carbon isotope signatu...

Microplastic is globally regarded as an important factor impacting biogeochemical cycles, yet our understanding of such influences is limited by the uncertainties of intricate microbial processes. By multiomics analysis, coupled with soil chemodiversity characterization and microbial carbon use efficiency (CUE), we investigated how microbial respon...

Societal Impact Statement Management practices, for example, in an agricultural context, are often tested in isolation or in pairwise interaction, but rarely using a higher number of jointly applied practices. In a proof‐of‐concept study, we test the effects of combining up to five management practices. Effects seen on soil and plant performance su...

Microbes thrive on plastic, bringing biohazard risks that shouldn’t be overlooked in efforts to tackle the pollution crisis.

Soil biota and functions are impacted by various anthropogenic stressors, including climate change, chemical pollution or microplastics. These stressors do not occur in isolation, and soil properties and functions appear to be directionally driven by the number of global change factors acting simultaneously. Building on this insight, we here hypoth...

Societal Impact Statement Winter wheat is one of the most important crops in the world. Microplastics, as an emerging pollutant, are widespread in agricultural soils due to various modern agricultural practices and can have adverse impacts on agricultural soils and plant growth. Herein, we investigated the effects of 10 types of microplastics on th...

Knowledge of differential life‐history strategies in arbuscular mycorrhizal (AM) fungi is relevant for understanding the ecology of this group and its potential role in sustainable agriculture and carbon sequestration. At present, AM fungal life‐history theories often focus on differential investment into intra‐ vs extraradical structures among AM...

Background Fungicides are an effective tool for protecting crops and maintaining a steady food supply. However, as pathogens continue to evolve, it is crucial to prolong the effectiveness of fungicides by delaying resistance development. A key strategy to achieving this is to combine or rotate fungicides with different modes of action. As fungicide...

Urbanization is a growing phenomenon affecting soils worldwide. Urban centers have been highlighted as hotspots for global change factors due to heightened anthropogenic activity. However, few studies have investigated the multifaceted impacts of global change factors (GCFs) acting in concert with urban soils. Thus, the objective of this study was...

Agricultural activities in the northeastern German plains are at risk due to climate change. Soil amendment with conditioners that improve water storage is a plausible alternative to mitigate such risks. While single conditioner additions to soil can be positive, doubts regarding their individual scalability have been raised. An unexplored alternat...

Communicating results and ideas to a wider audience has been an important, but challenging component of scientists working in an academic environment. Particularly in recent decades, various social media platforms have become increasingly important to facilitate this. In addition, many scientists have used blogging platforms to communicate and disc...

Soils, just like all other ecosystem compartments, change over time and, consequently, conditions for soil‐inhabiting organisms are also changing, affecting their composition and diversity. Soil biodiversity is a critical component of ecosystems that supports many essential ecosystem functions and services, such as nutrient cycling, carbon sequestr...

Deep learning applications in taxonomic classification for animals and plants from images have become popular, while those for microorganisms are still lagging behind. Our study investigated the potential of deep learning for the taxonomic classification of hundreds of filamentous fungi from colony images, which is typically a task that requires sp...

The COVID-19 pandemic has led to an unprecedented increase in pharmaceutical drug consumption and plastic waste disposal from personal protective equipment. Most drugs consumed during the COVID-19 pandemic were used to treat other human and animal diseases. Hence, their nearly ubiquitous presence in the soil and the sharp increase in the last 3 yea...

Established ecological theory has focused on unitary organisms, and thus its concepts have matured into a form that often hinders rather than facilitates the ecological study of modular organisms. Here, we use the example of filamentous fungi to develop concepts that enable integration of non‐unitary (modular) organisms into the established communi...

Microplastic (MP) pollution and alien plant invasions are two important threats to terrestrial ecosystems. Microplastics alter the physical and chemical characteristics of soil, potentially affecting the performance of alien plants. However, previous studies have overlooked the impact of weather on invasive plants in areas polluted by MPs. With the...

Antibiotic resistance genes (ARGs) have moved into focus as a critically important response variable in global change biology, given the increasing environmental and human health threat posed by these genes. However, we propose that elevated levels of ARGs should also be considered a factor of global change, not just a response. We provide evidence...

The estuarine plastisphere, a novel ecological habitat in the Anthropocene, has garnered global concerns. Recent geochemical evidence has pointed out its potential role in influencing nitrogen biogeochemistry. However, the biogeochemical significance of the plastisphere and its mechanisms regulating nitrogen cycling remain elusive. Using ¹⁵N- and ¹...

Anthropogenic activities impose multiple concurrent pressures on soil ecosystems at a global scale, but the response of soil microbes to multiple concurrent global change (GC) factors is poorly understood. Here, we applied 10 GC treatments individually and in random combinations of 8 factors to soil samples, and monitored their bacterial and viral...

Plants and their symbionts, such as arbuscular mycorrhizal (AM) fungi, are increasingly subjected to various environmental stressors due to climate change, including drought. As a response to drought, plants generally allocate more biomass to roots over shoots, thereby facilitating water uptake. However, whether this biomass allocation shift is mod...

Why Earth has remained habitable for billions of years is a question that has long fostered debate in biology and earth sciences. Closed systems approaches have yielded information about the underlying mechanisms, including the persistence of matter recycling. However, the majority of these studies have been conducted under relatively homogenous co...

Protists, a crucial part of the soil food web, are increasingly acknowledged as significant influencers of nutrient cycling and plant performance in farmlands. While topographical and climatic factors are often considered to drive microbial communities on a continental scale, higher trophic levels like heterotrophic protists also rely on their food...

Microplastic (MP) pollution likely affects global soil carbon (C) dynamics, yet it remains uncertain how and to what extent MP influences soil respiration. Here, we report on a global meta‐analysis to determine the effects of MP pollution on the soil microbiome and CO 2 emission. We found that MP pollution significantly increased the contents of so...

Although positive effects of arbuscular mycorrhizal (AM) fungi on plant performance under drought have been well documented, how AM fungi regulate soil functions and multifunctionality requires further investigation. In this study, we first performed a meta-analysis to test the potential role of AM fungi in maintaining soil functions under drought....

Our current planetary crisis, including multiple jointly acting factors of global change, moves the need for effective ecosystem restoration center stage and compels us to explore unusual options. We here propose exploring combinatorial approaches to restoration practices: management practices are drawn at random and combined from a locally relevan...

Background Tire wear particles (TWPs) produced by the abrasion between tires and road surfaces have been recognized as an emerging threat to soil health globally in recent years. They can be transported from the road surface to adjacent soil at different delivery rates, with precipitation a main driver underpinning this movement. However, studies t...

Our current planetary crisis moves the need for effective ecosystem restoration centerstage and compels us to explore unusual options. We here propose exploring combinatorial approaches to restoration practices: management practices are drawn at random and combined from a locally relevant pool of possible management interventions, thus creating an...

Trait-based frameworks are promising tools to understand the functional consequences of community shifts in response to environmental change. The applicability of these tools to soil microbes is limited by a lack of functional trait data and a focus on categorical traits. To address this gap for an important group of soil microorganisms, we identif...

Perennial plants create productive and biodiverse hotspots, known as fertile islands, beneath their canopies. These hotspots largely determine the structure and functioning of drylands worldwide. Despite their ubiquity, the factors controlling fertile islands under conditions of contrasting grazing by livestock, the most prevalent land use in dryla...

Litter decomposition is a key ecosystem process, relevant for the release and storage of nutrients and carbon in soil. Soil fungi are one of the dominant drivers of organic matter decomposition, but fungal taxa differ substantially in their functional ability to decompose plant litter. Knowledge is mostly based on observational data and subsequent...

Essential soil functions such as plant productivity, C storage, nutrient cycling and the storage and purification of water all depend on soil biological processes. Given this insight, it is remarkable that in modeling of these soil functions, the various biological actors usually do not play an explicit role. In this review and perspective paper we...

Microplastic pollution, an emerging pollution issue, has become a significant environmental concern globally due to its ubiquitous, persistent, complex, toxic, and ever-increasing nature. As a multifaceted and diverse suite of small plastic particles with different physicochemical properties and associated matters such as absorbed chemicals and mic...

Generative artificial intelligence (AI) models will have broad impacts on society including the scientific enterprise; ecology and environmental science will be no exception. Here, we discuss the potential opportunities and risks of advanced generative AI for visual material (images and video) for the science of ecology and the environment itself....

Environmental pollution is escalating due to rapid global development that often prioritizes human needs over planetary health. Despite global efforts to mitigate legacy pollutants, the continuous introduction of new substances remains a major threat to both human and ecosystem health. In response, global initiatives are focusing on risk assessment...

Microplastics (MPs) contamination presents a significant global environmental challenge, with its potential to influence soil carbon (C) dynamics being a crucial aspect for understanding soil C changes and global C cycling. This meta-analysis synthesizes data from 110 peer-reviewed publications to elucidate the directional, magnitude, and driving e...

Background Tire wear particles (TWPs) produced by the abrasion between tires and road surfaces have been recognized as an emerging threat to soil health globally in recent years. They can be transported from the road surface to adjacent soil at different delivery rates, with precipitation a main driver underpinning this movement. However, studies t...

Organismal functional strategies form a continuum from slow- to fast-growing organisms, in response to common drivers such as resource availability and disturbance. However, whether there is synchronisation of these strategies at the entire community level is unclear. Here, we combine trait data for >2800 above- and belowground taxa from 14 trophic...

Artificial intelligence (AI) is advancing rapidly and continually evolving in various fields. Recently, the release of ChatGPT has sparked significant public interest. In this study, we revisit the ‘100 Important Questions Facing Plant Science’ by leveraging ChatGPT as a valuable tool for generating thought-provoking ques- tions relevant to plant s...

Natural systems are under increasing pressure by a range of anthropogenic global change factors. Pesticides represent a nearly ubiquitously occurring global change factor and have the potential to affect soil functions. Currently the use of synthetic pesticides is at an all-time high with over 400 active ingredients being utilized in the EU alone,...

Microplastics affect soil functions depending on drought conditions. However, how their combined effect influences soil fungi and their linkages with ecosystem functions is still unknown. To address this, we used rhizosphere soil from a previous experiment in which we employed microplastic fibres addition and drought in a factorial design, and eval...

An estimated 258 million tons of plastic enter the soil annually. Joining persistent types of microplastic, there will be an increasing demand for biodegradable plastics. There are still many unknowns about plastic pollution by either type, and one large gap is the fate and composition of dissolved organic matter released from microplastics as well...

Mycorrhizal fungi can interlink and connect plants in a common mycorrhizal network (CMN). Studying CMNs is challenging due to pathways of material transfer but also plant and mycorrhizal effects that have to be tested and controlled in order to be able to evaluate the presence and magnitude of a specific CMN effect. These controls let to a clear bu...

Soil fungi are a key constituent of global biodiversity and play a pivotal role in agroecosystems. How arable farming affects soil fungal biogeography and whether it has a disproportional impact on rare taxa is poorly understood. Here, we used the high-resolution PacBio Sequel targeting the entire ITS region to investigate the distribution of soil...

The abundances of fungi and bacteria in soil are used as simple predictors for carbon dynamics, and represent widely available microbial traits. Soil biomarkers serve as quantitative estimates of these microbial groups, though not quantifying microbial biomass per se. The accurate conversion to microbial carbon pools, and an understanding of its co...

Soils provide essential ecosystem functions that are threatened by climate change and intensified land use. We explore how climate and land use impact multiple soil function simultaneously, employing two datasets: (1) observational – 456 samples from the European Land Use/Land Cover Area Frame Survey; and (2) experimental – 80 samples from Germany’...

Biodiversity is the manifestation of life on our planet and provides manifold benefits for humans. Yet we destroy ecosystems and drive species to extinction. We submit that anthropogenic biodiversity loss does not yet receive sufficient public attention, although biodiversity conservation and its sustainable use are key to mitigate global crises. E...

Plants and ecosystems worldwide are exposed to a wide range of chemical, physical, and biological factors of global change, many of which act concurrently. As bringing order to the array of factors is required in order to generate an enhanced understanding of simultaneous impacts, classification schemes have been developed. One such classification...

In recent years, there has been considerable progress in determining the soil properties that influence the structure of the soil microbiome. By contrast, the effects of microorganisms on their soil habitat have received less attention with most previous studies focusing on microbial contributions to soil carbon and nitrogen dynamics. However, soil...