Makrina Agaoglou

• PhD in Applied Mathematics, MSc
• Assistant Professor at Universidad Politécnica de Madrid

Days of Applied NOnlinearity and Complexity (DANOC) is a three-day online conference that intends to advance the discussion on recent developments in nonlinearity and complexity, and creatively link applications and theory. https://danoc.physics.auth.gr/

In this paper we study baroclinic waves both from the experimental and the theoretical perspective. We obtain data from a rotating annulus experiment capable of producing a series of baroclinic eddies similar to those found in the mid-latitude atmosphere. We analyze the experimental outputs using two methods. First, we apply a technique that involv...

In this paper, we study baroclinic waves from both the experimental and the theoretical perspective. We obtain data from a rotating annulus experiment capable of producing a series of baroclinic eddies similar to those found in the mid-latitude atmosphere. We analyze the experimental outputs using two methods. First, we apply a technique that invol...

Days of Applied NOnlinearity and Complexity (DANOC) is a two days online conference that intends to advance the discussion about the recent developments in nonlinearity and complexity, to creatively link applications and theory, tο explore the edge between different nonlinear scientific fields. We aim for DANOC to become a platform where scientists...

This research paper presents an analysis of the propagation of the SARS-CoV-2, or other similar pathogens, in a hospital isolation room using computational fluid dynamics (CFD) and Lagrangian Coherent Structures (LCS). The study investigates the airflow dispersion and droplets in the room under air conditioning vent and sanitizer conditions. The CF...

http://danoc.physics.auth.gr/ Days of Applied NOnlinearity and Complexity (DANOC) is a two days online conference that intends to advance the discussion about the recent developments in nonlinearity and complexity, to creatively link applications and theory, tο explore the edge between different nonlinear scientific fields.

The study of the phase space of multidimensional systems is one of the central open problems in dynamical systems. Being able to distinguish chaoticity from regularity in nonlinear dynamical systems, as well as to determine the subspace of the phase space in which instabilities are expected to occur, is also an important field. To investigate these...

This paper introduces a new global dynamics and chaos indicator based on the method of Lagrangian Descriptor apt for discriminating ordered and deterministic chaotic motions in multidimensional systems. The selected implementation of this method requires only the knowledge of orbits on finite time windows and is free of the computation of the tange...

We apply the method of Lagrangian Descriptors (LDs) to a symmetric Caldera-type potential energy surface which has three index-1 saddles surrounding a relatively flat region that contains no minimum. Using this method we show the phase space transport mechanism that is responsible for the existence and nonexistence of the phenomenon of dynamical ma...

In this work we analyze the bifurcation of dividing surfaces that occurs as a result of two period-doubling bifurcations in a 2D caldera-type potential. We study the structure, the range, the minimum and maximum extents of the periodic orbit dividing surfaces before and after a subcritical period-doubling bifurcation of the family of the central mi...

The study of the phase space of multidimensional systems is one of the central open problems in dynamical systems. Being able to distinguish chaoticity from regularity in nonlinear dynamical systems, as well as to determine the subspace of the phase space in which instabilities are expected to occur, is also an important field. To investigate these...

We apply the method of Lagrangian Descriptors (LDs) to a symmetric Caldera-type potential energy surface which has three index-1 saddles surrounding a relatively flat region that contains no minimum. Using this method we show the phase space transport mechanism that is responsible for the existence and non-existence of the phenomenon of dynamical m...

In this paper we study an asymmetric valley-ridge inflection point (VRI) potential, whose energy surface (PES) features two sequential index-1 saddles (the upper and the lower), with one saddle having higher energy than the other and two potential wells separated by the lower index-1 saddle. We show how the depth and the flatness of our potential c...

In this paper we study an asymmetric valley-ridge inflection point (VRI) potential, whose energy surface (PES) features two sequential index-1 saddles (the upper and the lower), with one saddle having higher energy than the other, and two potential wells separated by the lower index-1 saddle. We show how the depth and the flatness of our potential...

In this work, we analyze the bifurcation of dividing surfaces that occurs as a result of a pitchfork bifurcation of periodic orbits in a two degrees of freedom Hamiltonian System. The potential energy surface of the system that we consider has four critical points: two minima, a high energy saddle and a lower energy saddle separating two wells (min...

Selectivity is an important phenomenon in chemical reaction dynamics. This can be quantified by the branching ratio of the trajectories that visit one or the other well to the total number of trajectories in a system with a potential with two sequential index-1 saddles and two wells (top well and bottom well). In our case, the relative branching ra...

In this work, we continue the study of the bifurcations of the critical points in a symmetric Caldera potential energy surface. In particular, we study the influence of the depth of the potential on the trajectory behavior before and after the bifurcation of the critical points. We observe two different types of trajectory behavior: dynamical match...

Selectivity is an important phenomenon in chemical reaction dynamics. This can be quantified by the branching ratio of the trajectories that visit one or the other wells to the total number of trajectories in a system with a potential with two sequential index-1 saddles and two wells (top well and bottom well). In our case, the branching ratio is 1...

In this paper we demonstrate the capability of the method of Lagrangian descriptors to unveil the phase space structures that characterize transport in high-dimensional symplectic maps. In order to illustrate its use, we apply it to a four-dimensional symplectic map model that is used in chemistry to explore the nonlinear dynamics of van der Waals...

In this work we analyze the bifurcation of dividing surfaces that occurs as a result of a pitchfork bifurcation of periodic orbits in a two degrees of freedom Hamiltonian System. The potential energy surface of the system that we consider has four critical points: two minima, a high energy saddle and a lower energy saddle separating two wells (mini...

In this work, we continue the study of the bifurcations of the critical points in a symmetric Caldera potential energy surface. In particular, we study the influence of the depth of the potential on the trajectory behavior before and after the bifurcations of the critical points. We observe two different types of trajectory behavior: dynamical matc...

In this paper we demonstrate the capability of the method of Lagrangian descriptors to unveil the phase space structures that characterize transport in high-dimensional symplectic maps. In order to illustrate its use, we apply it to a four-dimensional symplectic map model that is used in chemistry to explore the nonlinear dynamics of van der Waals...

In this paper we compare the method of Lagrangian descriptors with the classical method of Poincaré maps for revealing the phase space structure of two-degree-of-freedom Hamiltonian systems. The comparison is carried out by considering the dynamics of a two-degree-of-freedom system having a valley ridge inflection point (VRI) potential energy surfa...

In this paper we compare the method of Lagrangian descriptors with the classical method of Poincare maps for revealing the phase space structure of two degree-of-freedom Hamiltonian systems. The comparison is carried out by considering the dynamics of a two degree-of-freedom system having a valley ridge inflection point (VRI) potential energy surfa...

Many organic chemical reactions are governed by potential energy surfaces that have a region with the topographical features of a caldera. If the caldera has a symmetry then trajectories transiting the caldera region are observed to exhibit a phenomenon that is referred to as dynamical matching. Dynamical matching is a constraint that restricts the...

Many organic chemical reactions are governed by potential energy surfaces that have a region with the topographical features of a caldera. If the caldera has a symmetry then trajectories transiting the caldera region are observed to exhibit a phenomenon that is referred to as dynamical matching. Dynamical matching is a constraint that restricts the...

This book is a collaborative project between researchers in the CHAMPS (Chemistry and Mathematics in Phase Space) research project https://www.champsproject.com Research in CHAMPS is concerned with discovering the geometrical structures in the phase space of dynamical systems that govern the many and varied mechanisms leading to a chemical reaction...

In this paper, we unveil the geometrical template of phase space structures that governs transport in a Hamiltonian system described by a potential energy surface with an entrance/exit channel and two wells separated by an index-1 saddle. For the analysis of the nonlinear dynamics mechanisms, we apply the method of Lagrangian descriptors, a traject...

Chemical selectivity, as quantified by a branching ratio, is a phenomenon relevant for many organic chemical reactions. It may be exhibited on a potential energy surface that features a valley-ridge inflection point in the region between two sequential index-1 saddles, with one saddle having higher energy than the other. Reaction occurs when a traj...

Chemical selectivity is a phenomenon displayed by potential energy surfaces (PES) that is relevant for many organic chemical reactions whose PES feature a valley-ridge inflection point (VRI) in the region between two sequential index-1 saddles. In this letter we describe the underlying dynamical phase space mechanism that qualitatively determines t...

Chemical selectivity, as quantified by a branching ratio, is a phenomenon relevant for many organic chemical reactions. It may be exhibited on a potential energy surface (PES) that features a valley-ridge inflection point (VRI) in the region between two sequential index-1 saddles, with one saddle having higher energy than the other. Reaction occurs...

In this paper we explore the phase space structures governing isomerization dynamics on a potential energy surface with four wells and an index-2 saddle. For this model, we analyze the influence that coupling both degrees of freedom of the system and breaking the symmetry of the problem have on the geometrical template of phase space structures tha...

In this paper we unveil the geometrical template of phase space structures that governs transport in a Hamiltonian system described by a potential energy surface with an entrance/exit channel and two wells separated by an index-1 saddle. For the analysis of the nonlinear dynamics mechanisms, we apply the method of Lagrangian descriptors, a trajecto...

Chemical selectivity is a phenomenon displayed by potential energy surfaces (PES) that is relevant for many organic chemical reactions whose PES feature a valley-ridge inflection point (VRI) in the region between two sequential index-1 saddles. In this letter we describe the underlying dynamical phase space mechanism that qualitatively determines t...

In this work we study the existence and uniqueness of (!; c)-periodic solutions for semilinear evolution equations in complex Banach spaces.

In this work we study the existence and uniqueness of (ω, c)-periodic solutions for semilinear evolution equations in complex Banach spaces.

In this paper we explore the phase space structures governing isomerization dynamics on a potential energy surface with four wells and an index-2 saddle. For this model, we analyze the influence that coupling both degrees of freedom of the system and breaking the symmetry of the problem have on the geometrical template of phase space structures tha...

Chemistry is concerned with the transformation of matter. In more detail, it is concerned with the breaking, formation, and rearrangement of bonds in molecules. Fundamentally, these descriptions highlight “changes in time”. Mathematically, the study of systems changing in time is the subject of dynamical systems theory. This book represents an acco...

In this work we study the existence and uniqueness of ({\omega},c)-periodic solutions for semilinear evolution equations in complex Banach spaces.

In this work, we study the in-plane oscillations of a finite lattice of particles coupled by linear springs under distributed harmonic excitation. Melnikov-type analysis is applied for the persistence of periodic oscillations of a reduced system.

In this work we investigate a one-dimensional parity-time (PT)-symmetric magnetic metamaterial consisting of split-ring dimers having gain or loss. Employing a Melnikov analysis we study the existence of localized travelling waves, i.e. homoclinic or heteroclinic solutions. We find conditions under which the homoclinic or heteroclinic orbits persis...

In this work we investigate a one-dimensional parity-time (PT)-symmetric magnetic metamaterial consisting of split-ring dimers having gain or loss. Employing a Melnikov analysis we study the existence of localized travelling waves, i.e. homoclinic or heteroclinic solutions. We find conditions under which the homoclinic or heteroclinic orbits persis...

In this work we investigate a one-dimensional parity-time (PT)-symmetric magnetic metamaterial consisting of split-ring dimers having gain or loss. Employing a Melnikov analysis we study the existence of localized travelling waves, i.e. homoclinic or heteroclinic solutions. We find conditions under which the homoclinic or heteroclinic orbits persis...

An rf superconducting quantum interference device (SQUID) consists of a superconducting ring interrupted by a Josephson junction (JJ). The induced supercurrents around the ring are determined by the JJ through the celebrated Josephson relations. We study the dynamics of a pair of parametrically-driven coupled SQUIDs lying on the same plane with the...

A discrete analogue of the extended Bogomolny-Prasad-Sommerfeld (BPS) Skyrme model that admits time-dependent solutions is presented. Using the spacing h of adjacent lattice nodes as a parameter, we identify the spatial profile of the solution and the continuation of the relevant branch of solutions over the lattice spacing for different values of...

A discrete analogue of the extended Bogomolny-Prasad-Sommerfeld (BPS) Skyrme model that admits time-dependent solutions is presented. Using the spacing h of adjacent lattice nodes as a parameter, we identify the spatial profile of the solution and the continuation of the relevant branch of solutions over the lattice spacing for different values of...

We consider a lattice equation modelling one-dimensional metamaterials formed by a discrete array of nonlinear resonators. We focus on periodic travelling waves due to the presence of a periodic force. The existence and uniqueness results of periodic travelling waves of the system are presented. Our analytical results are found to be in good agreem...

We consider a lattice equation modelling one-dimensional metamaterials formed by a discrete array of nonlinear resonators. We focus on periodic travelling waves due to the presence of a periodic force. The existence and uniqueness results of periodic travelling waves of the system are presented. Our analytical results are found to be in good agreem...

An rf superconducting quantum interference device (SQUID) consists of a superconducting ring interrupted by a Josephson junction (JJ). When driven by an alternating magnetic field, the induced supercurrents around the ring are determined by the JJ through the celebrated Josephson relations. This system exhibits rich nonlinear behavior, including ch...

In this work, we study a model of a one-dimensional magnetic metamaterial formed by a discrete array of nonlinear resonators. We focus on periodic and localized traveling waves of the model, in the presence of loss and an external drive. Employing a Melnikov analysis we study the existence and persistence of such traveling waves, and study their li...

In this work, we study a model of a one-dimensional magnetic metamaterial formed by a discrete array of nonlinear resonators. We focus on periodic and localized traveling waves of the model, in the presence of loss and an external drive. Employing a Melnikov analysis we study the existence and persistence of such traveling waves, and study their li...