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Introduction
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December 2015 - present
September 2011 - March 2016
September 2011 - October 2015
Publications
Publications (47)
Worldwide, people spend most of their time indoors; in their homes, workplaces, schools, and daycares. Indoor fungi can cause negative health effects due to the production of toxins or volatiles that trigger the immune system of the occupants. To what degree indoor fungi (mycobiomes) differ between buildings with different usage is poorly known. He...
Indoor fungi can cause negative health effects due to the production of toxins or volatiles that trigger the immune system of the occupants. To what degree indoor fungi (mycobiomes) differ between buildings with different usage is poorly known. Here, we compare the indoor mycobiomes in 123 children’s daycare centers and 214 private homes throughout...
Phenolic compounds in plant litter influence decomposition process both directly by their own degree of decomposability and indirectly by affecting decomposer processes. While phenolic characteristics of above-ground plant biomass are well-known, the fate of litter phenolics and their regulatory effects on belowground decomposition remain unclear....
The species in Amanita ser. Amidella (E.-J.Gilbert) Neville & Poumarat form a well-defined clade, but some taxa remain difficult to discriminate. In particular, the concept of Amanita valens (E.-J.Gilbert) Bertault remains controversial. To understand the phylogenetic placement of a set of collections from southern Portugal with a novel nrDNA barco...
Many children spend considerable time in daycare centers and may here be influenced by indoor microorganisms, including fungi. In this study, we investigate the indoor mycobiome of 125 daycare centers distributed along strong environmental gradients throughout Norway. Dust samples were collected from doorframes outside and inside buildings using a...
Protists, in particular bacterivores, are essential players in the rhizosphere; thus, how their interactions with bacteria and fungi affect plant productivity and soil nutrient cycles warrants more attention. Using next-generation sequencing of the 18 S rRNA gene, we investigated the distribution of two major protistan phyla, Cercozoa and Endomyxa,...
The species in genus Amanita section Amidella form a well-defined clade, but some taxa remain difficult to discriminate. In particular, the concept of Amanita valens (E.-J. Gilbert) Bertault remains controversial. To understand the phylogenetic placement of a set of collections from South Portugal with a novel nrDNA barcode, we have obtained nrDNA...
Biological communities within living organisms are structured by their host's traits. How host traits affect biodiversity and community composition is poorly explored for some associations, such as arthropods within fungal fruit bodies. Using DNA metabarcoding, we characterized the arthropod communities in living fruit bodies of 11 wood-decay fungi...
Because of their steep gradients in abiotic and biotic factors, mountains offer an ideal setting to illuminate the mechanisms that underlie patterns of species distributions and community assembly. We compared the composition of taxonomically and functionally diverse fungal communities in soils along five elevational gradients in mountains of the N...
Background
Children spend considerable time in daycare centers in parts of the world and are exposed to the indoor micro- and mycobiomes of these facilities. The level of exposure to microorganisms varies within and between buildings, depending on occupancy, climate, and season. In order to evaluate indoor air quality, and the effect of usage and s...
Many children spend considerable time in daycare centers and may here be influenced by indoor microorganisms, including fungi. In this study, we investigate the indoor mycobiome of 125 daycare centers distributed along strong environmental gradients throughout Norway. Dust samples were collected from doorframes outside and inside buildings using a...
Background
Microbial dysbiosis and microbiome-induced inflammation have emerged as important factors in oral squamous cell carcinoma (OSCC) tumorigenesis during the last two decades. However, the “rare biosphere” of the oral microbiome, including fungi, has been sparsely investigated. This study aimed to characterize the salivary mycobiome in a pro...
Climate change causes upward shift of forest lines worldwide, with consequences on soil biota and carbon (C) sequestration. We here analyse compositional changes in the soil biota across the forest line ecotone, an important transition zone between different ecosystems. We collected soil samples along transects stretching from subalpine mountain bi...
Plantations of Norway spruce have been established well beyond its natural range in many parts of the world, potentially impacting native microbial ecosystems and the processes they mediate. In this study, we investigate how the establishment of spruce plantations in a landscape dominated by native birch forests in western Norway impacts soil prope...
In the built environment, fungi can cause important deterioration of building materials and adverse health effects on occupants. Increased knowledge about indoor mycobiomes from different regions of the world, and their main environmental determinants, will enable improved indoor air quality management and identification of health risks. This is th...
The arctic tundra is undergoing climate-driven changes and there are serious concerns related to the future of arctic biodiversity and altered ecological processes under possible climate change scenarios. Arctic land surface temperatures and precipitation are predicted to increase further, likely causing major transformation in terrestrial ecosyste...
Soil depth represents a strong physiochemical gradient that greatly affects soil-dwelling microorganisms. Fungal communities are typically structured by soil depth, but how other microorganisms are structured is less known. Here, we tested whether depth-dependent variation in soil chemistry affects the distribution and co-occurrence patterns of soi...
DNA metabarcoding has become a powerful approach for analyzing complex communities from environmental samples, but there are still methodological challenges limiting its full potential. While conserved DNA markers, like 16S and 18S, often are not able to discriminate among closely related species, other more variable markers – like the fungal ITS r...
Climate change causes upward shift of forest lines worldwide, with consequences on soil biota and carbon (C). Using a space-for-time approach, we analyse compositional changes in the soil biota across the forest line ecotone, an important transition zone between different ecosystems. We collected soil samples along transects stretching from subalpi...
Background: Children spend considerable time in daycare centers in parts of the world, and are exposed to the indoor micro- and mycobiomes of these facilities. The level of exposure to microorganisms varies within and between buildings, depending on occupancy, climate and season. In order to evaluate indoor air quality, and the effect of usage and...
DNA metabarcoding has become a powerful approach for analyzing complex communities from environmental samples, but there are still methodological challenges limiting its full potential. While conserved DNA markers, like 16S and 18S, often are not able to discriminate among closely related species, other more variable markers-like the fungal ITS reg...
Background: In the built environment, fungi can cause important deterioration of building materials and have adverse health effects on occupants. We here investigate what are the most important environmental variables (climate, building features or occupant characteristics) driving the indoor mycobiome structure and diversity in houses. We used Nor...
Arctic regions are experiencing the greatest changes of climate warming on the planet, and marked variations have already been observed in terrestrial arctic ecosystems. While most studies have focused on the effects of warming on arctic vegetation and nutrient cycling, little is known about how belowground communities, such as root-associated fung...
Mushroom-forming fungi (Agaricomycetes) have the greatest morphological diversity and complexity of any group of fungi. They have radiated into most niches and fulfil diverse roles in the ecosystem, including wood decomposers, pathogens or mycorrhizal mutualists. Despite the importance of mushroom-forming fungi, large-scale patterns of their evolut...
The distribution patterns of tropical ectomycorrhizal ( ECM ) fungi along altitudinal gradients remain largely unknown. Furthermore, despite being an iconic site for biodiversity research, virtually nothing is known about the diversity and spatial patterns of fungi on Mt Kinabalu and neighbouring mountain ranges.
We carried out deep DNA sequencing...
We characterized fungal communities in dry and moist tundra and investigated the effect of long-term experimental summer warming on three aspects of functional groups of arctic fungi: richness, community composition and species abundance. Warming had profound effects on community composition, abundance, and, to a lesser extent, on richness of funga...
Climate warming leads to more intensive evaporation from the Arctic sea resulting in increased precipitation in the low Arctic, e.g., higher snowfall during winter. Deeper snow keeps the arctic soils warmer and alters soil attributes and vegetation, e.g., increase in nitrogen availability, expansion of shrubs and decline in shade-intolerant lichens...
Many arctic ecological processes are regulated by soil temperature that is tightly interconnected with snow cover distribution and persistence. Recently, various climate-induced changes have been observed in arctic tundra ecosystems, e.g. shrub expansion, resulting in reduction in albedo and greater C fixation in aboveground vegetation as well as i...
Clitopilus reticulosporus (Entolomataceae, Agaricales) growing on rotting wood is described as a new species based on collections from Austria and Hungary. Multi-gene phylogenetic analysis of ITS, rpb2, LSU and mtSSU confirms the placement of C. reticulosporus in the Clitopilus-Rhodocybe clade in the Entolomataceae. It is nested within the subclade...
The OTU distribution matrix with read abundance and with % sequence similarity, pairwise alignment length, and identity of the most similar reference sequence. M = moist tundra, D = dry tundra, C = control, T = warming.
The OTU distribution matrix with read abundance and with % sequence similarity, pairwise alignment length, and identity of the most similar reference sequence. M = moist tundra, D = dry tundra, C = control, T = warming.
Tropical mountains are hot spots of biodiversity and endemism, but the evolutionary origins of their unique biotas are poorly understood. In varying degrees, local and regional extinction, long-distance colonization, and local recruitment may all contribute to the exceptional character of these communities. Also, it is debated whether mountain ende...
Fungi, including symbionts, pathogens and decomposers, play crucial roles in community dynamics and nutrient cycling in terrestrial ecosystems. Despite their ecological importance, the responses of most arctic fungi to climate warming is unknown, so are their potential roles in driving the observed and predicted changes in tundra communities. We ca...
Arctic tundra regions have been responding to global warming with visible changes in plant community composition, including expansion of shrubs and declines in lichens and bryophytes. Even though it is well-known that the majority of arctic plants are associated with their symbiotic fungi, how fungal community composition will be different with cli...
Fungi play major roles in ecosystem processes, but the determinants of fungal diversity and biogeographic patterns remain poorly understood. Using DNA metabarcoding data from hundreds of globally distributed soil samples, we demonstrate that fungal richness is decoupled from plant diversity. The plant-to-fungus richness ratio declines exponentially...
(a) NMDS analysis of the ECM fungal communities of the moist tussock tundra plots with final stress 0.0523, final instability <0.00001, total r2 = 0.876 and orthogonality = 96.5%. MRPP A = 0.0927 and P = 0.0051. (b) NMDS analysis of the ECM fungal communities of the dry tundra replicates with final stress 0.1266 and final instability <0.00001. MRPP...
Arctic regions are experiencing the greatest rates of climate warming on the planet and marked changes have already been observed in terrestrial arctic ecosystems. While most studies have focused on the effects of warming on arctic vegetation and nutrient cycling, little is known about how belowground communities, such as fungi root-associated, res...
Species from Entoloma subg. Entoloma are commonly recorded from both the Northern and Southern Hemispheres and, according to literature, most of them have at least Nearctic-Palearctic distributions. However, these records are based on morphological analysis, and studies relating morphology, molecular data and geographical distribution have not been...
Novel species of microfungi described in the present study include the following from Australia: Catenulostroma corymbiae from Corymbia, Devriesia stirlingiae from Stirlingia, Penidiella carpentariae from Carpentaria, Phaeococcomyces eucalypti from Eucalyptus, Phialophora livistonae from Livistona, Phyllosticta aristolochiicola from Aristolochia, C...
O presente relatório resulta da proposta efectuada pela Associação Barranquenha para o
Desenvolvimento (ABPD), no âmbito do Projecto RECURSUS, ao corpo técnico do Grupo de Trabalho em Micologia do Centro de Estudos da Avifauna Ibérica (GTMCEAI).
O mesmo visa expor os resultados obtidos durante o ano de 2010, nomeadamente dos levantamentos técnico...
2 ÉVORA Resumo A presente comunicação relata os primeiros resultados visando o conhecimento de intoxicações com macrofungos (micetismos) no Alto Alentejo, e as suas causas. Como ponto de partida estudaram-se casos classificados como micetismos nos registos do Serviço de Urgência do Hospital do Espírito Santo de Évora. Com base nos processos clínico...