Leonardo Novelli

Leonardo Novelli
Monash University (Australia) · Monash Biomedical Imaging

Doctor of Philosophy

About

29
Publications
5,998
Reads
How we measure 'reads'
A 'read' is counted each time someone views a publication summary (such as the title, abstract, and list of authors), clicks on a figure, or views or downloads the full-text. Learn more
388
Citations
Additional affiliations
November 2020 - present
Monash University (Australia)
Position
  • PostDoc Position
March 2017 - December 2020
The University of Sydney
Position
  • PhD Student
September 2014 - September 2016
ETH Zurich
Position
  • Master's Student

Publications

Publications (29)
Article
Full-text available
Visual alterations under classic psychedelics can include rich phenomenological accounts of eyes-closed imagery. Preclinical evidence suggests agonism of the 5-HT2A receptor may reduce synaptic gain to produce psychedelic-induced imagery. However, this has not been investigated in humans. To infer the directed connectivity changes to visual connect...
Preprint
Full-text available
Interregional brain communication is mediated by the brain's physical wiring (i.e., structural connectivity). Yet, it remains unclear whether models describing directed, functional interactions between latent neuronal populations—effective connectivity—benefit from incorporating macroscale structural connectivity. Here, we assess a hierarchical emp...
Preprint
Full-text available
Depression is one of the most common and impactful features in premanifest Huntington’s disease (HD). Depression is increasingly being conceptualised as a dysconnection syndrome and two large-scale networks surmised to contribute to the expression of depressive symptoms in premanifest HD are the striatum and the default mode network. Existing neuro...
Article
Background Huntington’s Disease (HD) is increasingly being conceptualised as a circuitopathy (Hannan 2018) and two large‐scale brain networks surmised to contribute to the expression of depressive symptoms in premanifest HD (pre‐HD) include frontostriatal circuitry and the default mode network (DMN). The effective connectivity of these networks in...
Article
Background Young‐Onset Alzheimer’s disease (YOAD), a rare form of Alzheimer’s disease occurring before the age of 65, presents as a typical amnestic variant (memory problems) and posterior cortical atrophy ([PCA], visuospatial problems). The DMN is a core resting state network that increases activity during rest but decreases activity during extern...
Article
Full-text available
We present a didactic introduction to spectral Dynamic Causal Modelling (DCM), a Bayesian state-space modelling approach used to infer effective connectivity from non-invasive neuroimaging data. Spectral DCM is currently the most widely applied DCM variant for resting-state functional MRI analysis. Our aim is to explain its technical foundations to...
Preprint
Full-text available
We present a didactic introduction to spectral Dynamic Causal Modelling (DCM), a Bayesian state-space modelling approach used to infer effective connectivity from non-invasive neuroimaging data. Spectral DCM is currently the most widely applied DCM variant for resting-state functional MRI analysis. Our aim is to explain its technical foundations to...
Preprint
Full-text available
Many functional magnetic resonance imaging (fMRI) studies rely on estimates of hierarchically organised brain networks whose segregation and integration reflect the dynamic transitions of latent cognitive states. However, most existing methods for estimating the community structure of networks from both individual and group-level analysis neglect t...
Article
Full-text available
We are delighted to present you the Proceedings of the 2022 CNS meeting. The CNS meeting encourages approaches that combine theoretical, computational, and experimental work in the neurosciences, and provides an opportunity for participants to share their views. The abstracts corresponding to speakers' talks and posters are what you find collected...
Preprint
Full-text available
Classic psychedelics alter sense of self and patterns of self-related thought. These changes are hypothesised to underlie their therapeutic efficacy across internalising pathologies such as addiction, anxiety, and depression. Using resting-state functional MRI images from a randomised, double blinded, placebo-controlled clinical trial of 24 healthy...
Article
Full-text available
Adaptive behavior is coordinated by neuronal networks that are distributed across multiple brain regions such as in the cortico-basal ganglia-thalamo-cortical (CBGTC) network. Here, we ask how cross-regional interactions within such mesoscale circuits reorganize when an animal learns a new task. We apply multi-fiber photometry to chronically record...
Article
Full-text available
Background Classic psychedelic-induced ego dissolution involves a shift in the sense of self and blurring of boundary between the self and the world. A similar phenomenon is identified in psychopathology and is associated to the balance of anticorrelated activity between the default mode network (DMN) – which directs attention inwards – and the sal...
Article
Full-text available
Edge time series are increasingly used in brain imaging to study the node functional connectivity (nFC) dynamics at the finest temporal resolution while avoiding sliding windows. Here, we lay the mathematical foundations for the edge-centric analysis of neuroimaging time series, explaining why a few high-amplitude cofluctuations drive the nFC acros...
Preprint
Full-text available
Classic psychedelic-induced ego dissolution involves a shift in the sense of self and blurring of boundary between the self and the world. A similar phenomenon is identified in psychopathology and is associated to the balance of anticorrelated activity between the default mode network (DMN) – which directs attention inwards – and the salience netwo...
Preprint
Full-text available
Edge-centric functional connectivity (eFC) has recently been proposed to characterise the finest time resolution on the FC dynamics without the concomitant assumptions of sliding-window approaches. Here, we lay the mathematical foundations for the edge-centric analysis and examine its main findings from a quantitative perspective. The proposed fram...
Article
Full-text available
Inferring linear dependence between time series is central to our understanding of natural and artificial systems. Unfortunately, the hypothesis tests that are used to determine statistically significant directed or multivariate relationships from time-series data often yield spurious associations (Type I errors) or omit causal relationships (Type...
Article
Full-text available
Functional and effective networks inferred from time series are at the core of network neuroscience. Interpreting properties of these networks requires inferred network models to reflect key underlying structural features. However, even a few spurious links can severely distort network measures, posing a challenge for functional connectomes. We stu...
Preprint
Full-text available
Functional and effective networks inferred from time series are at the core of network neuroscience. Since it is common practice to compare network properties between patients and controls, it is crucial for inferred network models to reflect key underlying structural properties. However, even a few spurious links severely distort the shortest-path...
Preprint
Full-text available
Adaptive behavior is coordinated by neuronal networks that are distributed across multiple brain regions. How cross-regional interactions reorganize during learning remains elusive. We applied multi-fiber photometry to chronically record simultaneous activity of 12-48 mouse brain regions while mice learned a tactile discrimination task. We found th...
Article
Full-text available
Transfer entropy (TE) is an established method for quantifying directed statistical dependencies in neuroimaging and complex systems datasets. The pairwise (or bivariate) TE from a source to a target node in a network does not depend solely on the local source-target link weight, but on the wider network structure that the link is embedded in. This...
Preprint
Full-text available
The ability to quantify complex relationships within multivariate time series is a key component of modelling many physical systems, from the climate to brains and other biophysical phenomena. Unfortunately, even testing the significance of simple dependence measures, such as Pearson correlation, is complicated by altered sampling properties when a...
Preprint
Full-text available
Transfer entropy is an established method for quantifying directed statistical dependencies in neuroimaging and complex systems datasets. The pairwise (or bivariate) transfer entropy from a source to a target node in a network does not depend solely on the local source-target link weight, but on the wider network structure that the link is embedded...
Article
Full-text available
Network inference algorithms are valuable tools for the study of large-scale neuroimaging datasets. Multivariate transfer entropy is well suited for this task, being a model-free measure that captures nonlinear and lagged dependencies between time series to infer a minimal directed network model. Greedy algorithms have been proposed to efficiently...
Preprint
Full-text available
Network inference algorithms are valuable tools for the study of large-scale neuroimaging datasets. Multivariate transfer entropy is well suited for this task, being a model-free measure that captures nonlinear and lagged dependencies between time series to infer a minimal directed network model. Greedy algorithms have been proposed to efficiently...
Preprint
Full-text available
The Information Dynamics Toolkit xl (IDTxl) is a comprehensive software package for efficient inference of networks and their node dynamics from multivariate time series data using information theory. IDTxl provides functionality to estimate the following measures: 1) For network inference: multivariate transfer entropy (TE)/Granger causality (GC),...
Conference Paper
Full-text available
Already Helmholtz profoundly addressed the question how the nonlinearity of the human hearing sensor, the cochlea, might shape human sound perception. At his time, research was, however, obstructed by the lack of experimental data regarding the amplification properties of the inner ear. In the meantime, accurate measuring methods have permitted the...

Network

Cited By