Joaquín Ortego

Estación Biológica de Doñana · Ecology & Evolution

The association between population dynamics and genetic variability is of fundamental importance for both evolutionary and conservation biology. We combined long-term population monitoring and molecular genetic data from 123 offspring and their parents at 28 microsatellite loci to investigate changes in genetic diversity over 14 cohorts in a small...

Information on the association between geographical patterns of hybridization and the climatic niche requirements and co-occurrence of the species involved can provide important insights that further our understanding of the factors promoting the formation of hybrid zones. Here, we test whether climatic niche suitability explains patterns of hybrid...

AimWe studied which factors shape contemporary patterns of genetic structure, diversity and admixture in the canyon live oak (Quercus chrysolepis). Specifically, we tested two alternative hypotheses: (1) that areas with high habitat suitability and stability since the Last Glacial Maximum (LGM) sustain higher effective population sizes, resulting i...

Taxonomy has traditionally relied on morphological and ecological traits to interpret and classify biological diversity. Over the last decade, technological advances and conceptual developments in the field of molecular ecology and systematics have eased the generation of genomic data and changed the paradigm of biodiversity analysis. Here we illus...

Improving our knowledge of how past climate-driven selection has acted on present-day trait population divergence is essential to understand local adaptation processes and improve our predictions on the evolutionary trajectories in the face of altered selection pressures resulting from ongoing climate change. In this study, we investigated signals...

Aim: The proximate ecological and evolutionary processes underlying the high biodiversity of neotropical montane cloud forests are still very poorly understood. Climatic oscillations may have contributed to vicariance and cladogenesis, but also promoted secondary contact and erosion of genetic divergence. Here we tested whether geographical diversi...

Postdivergence gene flow can trigger a number of creative evolutionary outcomes, ranging from the transfer of beneficial alleles across species boundaries (i.e., adaptive introgression) to the formation of new species (i.e., hybrid speciation). Although neutral and adaptive introgression has been broadly documented in nature, hybrid speciation is a...

Post-divergence gene flow can trigger a number of creative evolutionary outcomes, ranging from the transfer of beneficial alleles across species boundaries (i.e., adaptive introgression) to the formation of new species (i.e., hybrid speciation). While neutral and adaptive introgression has been broadly documented in nature, hybrid speciation is ass...

Aim Although thermophilous and arid-dwelling relict biotas constitute a singular component of European biodiversity of high conservation value, we still largely ignore their biogeographic history. In this study, we investigate the geographical diversification of the Maghrebian-Levantine crested grasshopper and its colonization of semiarid habitats...

Alpine biotas are paradigmatic of the countervailing roles of geographic isolation and dispersal during diversification. In temperate regions, repeated distributional shifts driven by Pleistocene climatic oscillations produced both recurrent pulses of population fragmentation and opportunities for gene flow during range expansions. Here, we test wh...

Aim Cold-adapted biotas from mid-latitudes often show small population sizes, harbour low levels of local genetic diversity and are highly vulnerable to extinction due to ongoing climate warming and the progressive shrinking of montane and alpine ecosystems. In this study, we use a suite of analytical approaches to infer the demographic processes t...

Although the genetic consequences of contemporary landscape composition and range shifts driven Pleistocene climatic oscillations have been studied fairly well in alpine organisms, we know much less about how these factors have shaped the demography of taxa with broader climatic niches and distributions. Here, we use high-throughput sequencing data...

The study of the genetic makeup and demographic fate of alien species is essential to understand their capacity to recover from founder effects, adapt to new environmental conditions and, ultimately, become invasive and potentially damaging. Here, we employ genomic data to gain insights into key demographic processes that might help to explain the...

Although the pervasiveness of intraspecific wing-size polymorphism and transitions to flightlessness have long captivated biologists, the demographic outcomes of shifts in dispersal ability are not yet well understood and have been seldom studied at early stages of diversification. Here, we use genomic data to infer the consequences of dispersal-re...

Aim: Cold-adapted biotas from mid-latitudes often show small population sizes, harbor low levels of local genetic diversity, and are highly vulnerable to extinction due to ongoing climate warming and the progressive shrink of montane and alpine ecosystems. In this study, we use a suite of analytical approaches to infer the demographic processes tha...

Inferring the ecological and evolutionary processes underlying lineage and phenotypic diversification is of paramount importance to shed light on the origin of contemporary patterns of biological diversity. However, reconstructing phylogenetic relationships in recent evolutionary radiations represents a major challenge due to the frequent co-occurr...

Aim: Two main biogeographical hypotheses have been proposed to explain the Mediterranean-Turanian disjunct distributions exhibited by numerous steppe-dwelling organisms, namely (a) dispersal during the Messinian salinity crisis (∼5.96-5.33 Ma) followed by range fragmentation and vicariance, and (b) Pleistocene colonization and recent processes of p...

It has been long assumed that abiotic factors (i.e., geography and climate) dominate the ecological and evolutionary processes underlying the distribution of species, lineages and genes at broad spatial scales and, as a result, the study of interspecific interactions has largely been overlooked in biogeography research and ignored entirely in phylo...

Secondary contact in close relatives can result in hybridization and the admixture of previously isolated gene pools. However, after an initial period of hybridization, reproductive isolation can evolve through different processes and lead to the interruption of gene flow and the completion of the speciation process. Omocestus minutissimus and O. u...

Understanding the processes that shape neutral and adaptive genomic variation is a fundamental step to determine the demographic and evolutionary dynamics of pest species. Here, we use genomic data obtained via restriction site‐associated DNA sequencing to investigate the genetic structure of Moroccan locust (Dociostaurus maroccanus) populations fr...

Abstract Every year more than 1 million commercial bumblebee colonies are deployed in greenhouses worldwide for their pollination services. While commercial pollinators have been an enormous benefit for crop production, their use is emerging as an important threat. Commercial pollinators have been linked to pathogen spillover, and their introductio...

Rapid speciation events, with taxa generated over a short time period, are among the most investigated biological phenomena. However, molecular systematics often reveals contradictory results compared with morphological/phenotypical diagnoses of species under scenarios of recent and rapid diversification. In this study, we used molecular data from...

Every year more than one million commercial bumblebee colonies are deployed in greenhouses worldwide for its pollination services to several commercially important crops such as tomato and different species of berries. While commercial pollinators have been an enormous benefit for the production of essential food crops and for achieving higher yiel...

Inferring the processes underlying spatial patterns of genomic variation is fundamental to understand how organisms interact with landscape heterogeneity and to identify the factors determining species distributional shifts. Here, we employ genomic data (ddRADSeq) to test biologically‐informed models representing historical and contemporary demogra...

Inferring the demographic history of species is fundamental for understanding their responses to past climate/landscape alterations and improving our predictions about the future impacts of the different components of ongoing global change. Estimating the time-frame at which population fragmentation took place is also critical to determine whether...

A long‐term debate in evolutionary biology is the extent to which reproductive isolation is a necessary element of speciation. Hybridizing plants in general are cited as evidence against this notion and oaks specifically have been used as the classic example of species maintenance without reproductive isolation. Here, we use thousands of SNPs gener...

Introgressive hybridization can introduce genetic novelty into recipient lineages, induce important phenotypic changes and, ultimately, result in the formation of new species. The conditions in which hybridization is more prone to occur and its potential evolutionary consequences have been long discussed, nevertheless empirical examples revealing i...

Grazing is an influential land use that has introduced profound changes in worldwide landscapes, ecosystems and their species. In this paper, we analysed the influence of grazing on the presence and abundance of the endangered Mioscirtus wagneri, a monophagous grasshopper inhabiting inland hypersaline ecosystems in Spain and showing a marked spatia...

Quaternary climatic oscillations have been recognized as a major factor shaping the distribution and demography of most organisms worldwide. A classical paradigm establishes that populations that have persisted in climatically stable areas harbor higher genetic variation than those located in climatically unstable and/or recently colonized regions....

Here we study hybridization, introgression and lineage diversification in the widely distributed canyon live oak (Quercus chrysolepis) and the relict island oak (Q. tomentella), two Californian golden cup oaks with an intriguing biogeographical history. We employed restriction-site-associated DNA sequencing and integrated phylogenomic and populatio...

Background: The combination of model-based comparative techniques, disparity analyses and ecomorphological correlations constitutes a powerful method to gain insight into the evolutionary mechanisms that shape morphological variation and speciation processes. In this study, we used a time-calibrated phylogeny of 70 Iberian species of short-horned g...

The study of the neutral and/or selective processes driving genetic variation in natural populations is central to determine the evolutionary history of species and lineages and understand how they interact with different historical and contemporary components of landscape heterogeneity. Here, we combine nuclear and mitochondrial data to study the...

Understanding the consequences of past environmental changes on the abiotic and biotic components of the landscape and deciphering their impacts on the demographic trajectories of species is a major issue in evolutionary biogeography. In this study, we combine nuclear and mitochondrial genetic data to study the phylogeographical structure and linea...

Phylogenetic analyses and species delimitation methods are powerful tools for understanding patterns of species diversity. Given the current biodiversity crisis, such approaches are invaluable for urgent assessment and delimitation of truthful species, particularly of endangered and morphologically cryptic taxa from vulnerable areas submitted to st...

Sexual size dimorphism (SSD) is widespread and variable in nature. Although female-biased SSD predominates among insects, the proximate ecological and evolutionary factors promoting this phenomenon remain largely unstudied. Here, we employ modern phylogenetic comparative methods on 8 subfamilies of Iberian grasshoppers (85 species) to examine the v...

Genetic differentiation among populations may arise from the disruption of gene flow due to local adaptation to distinct environments and/or neutral accumulation of mutations and genetic drift resulted from geographical isolation. Quantifying the role of these processes in determining the genetic structure of natural populations remains challenging...

Sexual size dimorphism (SSD) is widespread and variable in nature. Although female-biased SSD predominates among insects, the proximate ecological and evolutionary factors promoting this phenomenon remain largely unstudied. Here, we employ modern phylogenetic comparative methods on 8 subfamilies of Iberian grasshoppers (85 species) to examine the v...

Understanding the processes underlying spatial patterns of genetic diversity and structure of natural populations is a central topic in evolutionary biogeography. In this study, we combine data on ancient and contemporary landscape composition to get a comprehensive view of the factors shaping genetic variation across the populations of the scrub-l...

Natural hybridization, which can be involved in local adaptation and in speciation processes, has been linked to different sources of anthropogenic disturbance. Here, we use genotypic data to study range-wide patterns of genetic admixture between the serpentine-soil specialist leather oak (Quercus durata) and the widespread Californian scrub oak (Q...

The extent of inbreeding depression and the magnitude of heterozygosity–fitness correlations (HFC) have been suggested to depend on the environmental context in which they are assayed, but little evidence is available for wild populations. We combine extensive molecular and capture–mark–recapture data from a blue tit (Cyanistes caeruleus) populatio...

Past climate change has caused shifts in species distributions and undoubtedly impacted patterns of genetic variation, but the biological processes mediating responses to climate change, and their genetic signatures, are often poorly understood. We test six species-specific biologically informed hypotheses about such processes in canyon live oak (Q...

We obtained the first records of Sciobia (Thilptoblemus) natalia in Europe after a single record from Algeciras (Spain), about one century ago. We found the species in Tarifa, Benelup-Casas Viejas and Alcalá de los Gazules (Cádiz province) in plots with open land and herbaceous vegetation of wasteland, cattle states, edges of agricultural land, and...

The integration of genetic information with ecological and phenotypic data constitutes an effective approach to gain insight into the mechanisms determining interpopulation variability and the evolutionary processes underlying local adaptation and incipient speciation. Here, we use the Pyrenean Morales grasshopper (Chorthippus saulcyi moralesi) as...

Background Understanding the underlying processes shaping spatial patterns of genetic structure in free-ranging organisms is a central topic in evolutionary biology. Here, we aim to disentangle the relative importance of neutral (i.e. genetic drift) and local adaptation (i.e. ecological divergence) processes in the evolution of spatial genetic stru...

Genetic diversity is a key parameter to delineate management units, but many organisms also display ecological characteristics that may reflect potential local adaptations. Here, we used ecological and genetic information to delineate management units for a complex system involving several ecotypes of caribou (Rangifer tarandus) from Québec and Lab...

Host specificity within plant-feeding insects constitutes a fascinating example of natural selection that promotes inter-specific niche segregation. If specificity is strong, composition of local plant parasitic insect guilds is largely dependent on the presence and prevalence of the preferred hosts. Alternatively, if it is weak or absent, historic...

Premise of the study: Geography and climate shape the distribution of organisms, their genotypes, and their phenotypes. To understand historical and future evolutionary and ecological responses to climate, we compared the association of geography and climate of three oak species (Quercus engelmannii, Quercus berberidifolia, and Quercus cornelius-m...

The study of the factors structuring genetic variation can help to infer the neutral and adaptive processes shaping the demographic and evolutionary trajectories of natural populations. Here, we analyse the role of isolation-by distance (IBD), isolation-by-resistance (IBR, defined by landscape composition), and isolation by environment (IBE, estima...

The taxonomy of oaks (Quercus) is always a challenge because many species exhibit variable phenotypes that overlap with other species. The scrub White Oaks of California are no exception. In California, Quercus section Quercus (i.e., White Oaks) includes six species of scrub oaks plus four tree oak species. Field identification utilizes leaf traits...

Understanding the factors promoting species formation is a major task in evolutionary research. Here, we employ an integrative approach to study the evolutionary history of the Californian scrub white oak species complex (genus Quercus). To infer the relative importance of geographical isolation and ecological divergence in driving the speciation p...

Conservation plans can be greatly improved when information on the evolutionary and demographic consequences of habitat fragmentation is available for several co-distributed species. Here, we study spatial patterns of phenotypic and genetic variation among five grasshopper species that are co-distributed across a network of microreserves but show r...

The study of the demographic history of species can help to understand the negative impact of recent population declines in organisms of conservation concern. Here, we use neutral molecular markers to explore the genetic consequences of the recent population decline and posterior recovery of the Eurasian eagle owl (Bubo bubo) in the Iberian Peninsu...

Multiple mating to obtain genetic benefits has been championed as the most likely cause of the evolution of polygamy. However, this assumption has been put into question by an increasing number of recent studies, most of which highlight the importance of considering ecological constraints to comprehend variation in extrapair (EP) behaviour. Here, w...

Anthropogenic habitat fragmentation has altered the distribution and population sizes in many organisms worldwide. For this reason, understanding the demographic and genetic consequences of this process is necessary to predict the fate of populations and establish management practices aimed to ensure their viability. In this study, we analyse wheth...

Higher individual genetic quality has been hypothesized to be associated with the expression of conspicuous ornaments. However, the relationship between multicomponent sexual signals and heterozygosity is poorly understood. In this study, we examined whether different ornaments, including song (repertoire size and bout length) and plumage coloratio...

The Chorthippus group binotatus (Orthoptera: Acridae) is a species complex of grasshoppers distributed in southwest Europe and north Africa. They often form small and fragmented populations due to human-driven habitat destruction and/or the patchy distribution of their natural montane habitats. Here, we describe 18 novel polymorphic microsatellite...