Jiri Mekyska

Jiri Mekyska
Brno University of Technology · Department of Telecommunications

Ph.D.
R&D of digital biomarkers applied in the field of neurodegenerative and neurodevelopmental disorders

About

177
Publications
39,761
Reads
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3,371
Citations
Introduction
Jiri Mekyska a principal scientist and the head of the BDALab (Brain Diseases Analysis Laboratory) developing new digital biomarkers enabling to better understand, diagnose and monitor neurodegenerative (e.g. Parkinson’s disease) and neurodevelopmental (e.g. dysgraphia) diseases. I lead a multidisciplinary team of researchers (signal processing engineers, data scientists, neurologists, psychologists, etc.) that moves the research in the field beyond the state of the art.
Additional affiliations
May 2015 - present
Brno University of Technology
Position
  • Head, Brain Diseases Analysis Laboratory
December 2014 - April 2015
Brno University of Technology
Position
  • Researcher
June 2014 - June 2014
Centre de recherches INRIA Bordeaux Sud-Ouest
Position
  • Researcher
Education
July 2010 - November 2014
Brno University of Technology
Field of study
  • Signal Processing
September 2008 - June 2010
Brno University of Technology
Field of study
  • Signal Processing
September 2005 - June 2008
Brno University of Technology
Field of study
  • Signal Processing

Publications

Publications (177)
Article
Full-text available
Hypokinetic dysarthria (HD) occurs in 90% of Parkinson's disease (PD) patients. It manifests specifically in the areas of articulation, phonation, prosody, speech fluency, and faciokinesis. We aimed to systematically review papers on HD in PD with a special focus on (1) early PD diagnosis and monitoring of the disease progression using acoustic voi...
Article
Full-text available
Hypokinetic dysarthria (HD) and freezing of gait (FOG) are both axial symptoms that occur in patients with Parkinson’s disease (PD). It is assumed they have some common pathophysiological mechanisms and therefore that speech disorders in PD can predict FOG deficits within the horizon of some years. The aim of this study is to employ a complex quant...
Article
Full-text available
Introduction: Hypokinetic dysarthria (HD) is a common symptom of Parkinson's disease (PD) which does not respond well to PD treatments. We investigated acute effects of repetitive transcranial magnetic stimulation (rTMS) of the motor and auditory feedback area on HD in PD using acoustic analysis of speech. Methods: We used 10 Hz and 1 Hz stimula...
Article
This paper presents a study of the approaches in the state-of-the-art in the field of pathological speech signal analysis with a special focus on parametrization techniques. It provides a description of 92 speech features where some of them are already widely used in this field of science and some of them have not been tried yet (they come from dif...
Article
Objective: We present the PaHaW Parkinson's disease handwriting database, consisting of handwriting samples from Parkinson's disease (PD) patients and healthy controls. Our goal is to show that kinematic features and pressure features in handwriting can be used for the differential diagnosis of PD. Methods and material: The database contains rec...
Article
Full-text available
Children who do not sufficiently develop graphomotor skills essential for handwriting often develop graphomotor disabilities (GD), impacting the self-esteem and academic performance of the individual. Current examination methods of GD consist of scales and questionaries, which lack objectivity, rely on the perceptual abilities of the examiner, and...
Preprint
Full-text available
Objective: We present the PaHaW Parkinson's disease handwriting database, consisting of handwriting samples from Parkinson's disease (PD) patients and healthy controls. Our goal is to show that kinematic features and pressure features in handwriting can be used for the differential diagnosis of PD. Methods and Material: The database contains record...
Preprint
Full-text available
Even though the computerised assessment of developmental dysgraphia (DD) based on online handwriting processing has increasing popularity, most of the solutions are based on a setup, where a child writes on a paper fixed to a digitizing tablet that is connected to a computer. Although this approach enables the standard way of writing using an inkin...
Preprint
Full-text available
Graphomotor and handwriting disabilities (GD and HD, respectively) could significantly reduce children's quality of life. Effective remediation depends on proper diagnosis; however, current approaches to diagnosis and assessment of GD and HD have several limitations and knowledge gaps, e.g. they are subjective, they do not facilitate identification...
Article
Full-text available
Introduction: Hypokinetic dysarthria (HD) is a common motor speech symptom of Parkinson’s disease (PD) which does not respond well to PD treatments. We investigated short-term effects of transcranial direct current stimulation (tDCS) on HD in PD using acoustic analysis of speech. Based on our previous studies we focused on stimulation of the right...
Article
Full-text available
Hypokinetic dysarthria (HD) is a difficult-to-treat symptom affecting quality of life in patients with Parkinson’s disease (PD). Levodopa may partially alleviate some symptoms of HD in PD, but the neural correlates of these effects are not fully understood. The aim of our study was to identify neural mechanisms by which levodopa affects articulatio...
Chapter
Even though the computerised assessment of developmental dysgraphia (DD) based on online handwriting processing has increasing popularity, most of the solutions are based on a setup, where a child writes on a paper fixed to a digitizing tablet that is connected to a computer. Although this approach enables the standard way of writing using an inkin...
Article
Oral diadochokinesis (oral-DDK) is one of the common maximum performance task used in clinical practice to evaluate the oral motor mechanism. Although there are reference values for some languages, there are no recent publications of adult population speaking Spanish, German or Czech. Aims: 1) to describe the values of oral-DDK in adult speakers of...
Article
Deep Learning (DL), a groundbreaking branch of Machine Learning (ML), has emerged as a driving force in both theoretical and applied Artificial Intelligence (AI). DL algorithms, rooted in complex and non-linear artificial neural systems, excel at extracting high-level features from data. DL has demonstrated human-level performance in real-world tas...
Chapter
Speech disorders, collectively referred to as hypokinetic dysarthria (HD), are early biomarkers of Parkinson’s disease (PD). To assess all dimensions of HD, patients could perform several speech tasks using a smartphone outside a clinic. This paper aims to adapt the parametrization process to running speech so that a patient is not required to inte...
Preprint
Full-text available
Successful acquisition of handwriting skills as a child can have important consequences for later education. Possible graphomotor or handwriting disabilities (GD and HD, respectively) could reduce quality of life but effective remediation depends on proper diagnosis. However, current approaches to Graphomotor and Handwriting Disabilities Rating Sca...
Article
Parkinson’s disease (PD) is a neurodegenerative condition with constantly increasing prevalence rates, affecting strongly life quality in terms of neuromotor and cognitive performance. PD symptoms include voice and speech alterations, known as hypokinetic dysarthria (HD). Unstable phonation is one of the manifestations of HD. Repetitive transcrania...
Article
Full-text available
Handwriting is a complex perceptual–motor skill that is mastered around the age of 8. Although its computerized analysis has been utilized in many biometric and digital health applications, the possible effect of gender is frequently neglected. The aim of this paper is to analyze different online handwritten tasks performed by intact subjects and e...
Preprint
Full-text available
To this date, studies focusing on the prodromal diagnosis of Lewy body diseases (LBDs) based on quantitative analysis of graphomotor and handwriting difficulties are missing. In this work, we enrolled 18 subjects diagnosed with possible or probable mild cognitive impairment with Lewy bodies (MCI-LB), 7 subjects having more than 50% probability of d...
Preprint
Full-text available
Parkinson's disease (PD) is a common neurodegenerative disorder with a prevalence rate estimated to 2.0% for people aged over 65 years. Cardinal motor symptoms of PD such as rigidity and bradykinesia affect the muscles involved in the handwriting process resulting in handwriting abnormalities called PD dysgraphia. Nowadays, online handwritten signa...
Preprint
Groundbreaking advances in theoretical and applied Artificial Intelligence (AI). Deep Learning (DL) algorithms are grounded in non-linear and complex artificial neural systems that progressively extract higher-level features from data. DL is frequently compared with human-level performance in real-world tasks, such as clinical diagnostics. It is al...
Chapter
Parkinson’s disease (PD) is a common neurodegenerative disorder with a prevalence rate estimated to \(2.0\%\) for people aged over 65 years. Cardinal motor symptoms of PD such as rigidity and bradykinesia affect the muscles involved in the handwriting process resulting in handwriting abnormalities called PD dysgraphia. Nowadays, online handwritten...
Chapter
To this date, studies focusing on the prodromal diagnosis of Lewy body diseases (LBDs) based on quantitative analysis of graphomotor and handwriting difficulties are missing. In this work, we enrolled 18 subjects diagnosed with possible or probable mild cognitive impairment with Lewy bodies (MCI-LB), 7 subjects having more than 50% probability of d...
Preprint
Full-text available
Motor speech disorders in patients with Parkinson’s disease (PD), collectively referred to as hypokinetic dysarthria, are the early markers of the disease. Acoustic speech features are, therefore, suitable digital biomarkers for the diagnosis and monitoring of this pathological phenomenon. At the same time, it is clear that language plays an essent...
Article
Full-text available
Parkinson's disease dysgraphia (PDYS), one of the earliest signs of Parkinson's disease (PD), has been researched as a promising biomarker of PD and as the target of a noninvasive and inexpensive approach to monitoring the progress of the disease. However, although several approaches to supportive PDYS diagnosis have been proposed (mainly based on...
Chapter
Repetitive Transcranial Magnetic Stimulation (rTMS) is a non-invasive technique which is known to produce modifications in cortical brain activity. This paper is devoted to describe potential beneficial effects of rTMS on the phonation stability of Parkinson’s Disease Patients (PDPs). To this end, several measurements derived from phonation have be...
Preprint
This paper deals with a~complex acoustic analysis of phonation in patients with Parkinson's disease (PD) with a~special focus on estimation of disease progress that is described by 7 different clinical scales (e.\,g. Unified Parkinson's disease rating scale or Beck depression inventory). The analysis is based on parametrization of 5 Czech vowels pr...
Preprint
This article presents a~study of the approaches in the state-of-the-art in the field of pathological speech signal analysis with a~special focus on parametrization techniques. It provides a~description of 92 speech features where some of them are already widely used in this field of science and some of them have not been tried yet (they come from d...
Preprint
Full-text available
In this paper we summarize several applications based on thermal imaging. We emphasize the importance of emissivity adjustment for a proper temperature measurement. A new set of face images acquired at different emissivity values with steps of 0.01 is also presented and will be distributed for free for research purposes. Among the utilities, we can...
Preprint
Full-text available
When focusing an image, depth of field, aperture and distance from the camera to the object, must be taking into account, both, in visible and in infrared spectrum. Our experiments reveal that in addition, the focusing problem in thermal spectrum is also hardly dependent of the temperature of the object itself (and/or the scene).
Preprint
Full-text available
This work defines a procedure for collecting naturally induced emotional facial expressions through the vision of movie excerpts with high emotional contents and reports experimental data ascertaining the effects of emotions on memory word recognition tasks. The induced emotional states include the four basic emotions of sadness, disgust, happiness...
Preprint
Full-text available
Face segmentation is a first step for face biometric systems. In this paper we present a face segmentation algorithm for thermographic images. This algorithm is compared with the classic Viola and Jones algorithm used for visible images. Experimental results reveal that, when segmenting a multispectral (visible and thermal) face database, the propo...
Preprint
Full-text available
Up to 90% of patients with Parkinson's disease (PD) suffer from hypokinetic dysathria (HD) which is also manifested in the field of phonation. Clinical signs of HD like monoloudness, monopitch or hoarse voice are usually quantified by conventional clinical interpretable features (jitter, shimmer, harmonic-to-noise ratio, etc.). This paper provides...
Preprint
This paper deals with a~complex acoustic analysis of phonation in patients with Parkinson's disease (PD) with a~special focus on estimation of disease progress that is described by 7 different clinical scales (e.\,g. Unified Parkinson's disease rating scale or Beck depression inventory). The analysis is based on parametrization of 5 Czech vowels pr...
Preprint
Full-text available
Up to 90 % of patients with Parkinson's disease (PD) suffer from hypokinetic dysarthria (HD). In this work, we analysed the power of conventional speech features quantifying imprecise articulation, dysprosody, speech dysfluency and speech quality deterioration extracted from a specialized poem recitation task to discriminate dysarthric and healthy...
Preprint
Full-text available
This paper deals with a complex acoustic analysis of phonation in patients with Parkinson's disease (PD) with a special focus on estimation of disease progress that is described by 7 different clinical scales ,e. g. Unified Parkinson's disease rating scale or Beck depression inventory. The analysis is based on parametrization of 5 Czech vowels pron...
Preprint
Full-text available
This paper presents a study of the approaches in the state-of-the-art in the field of pathological speech signal analysis with a special focus on parametrization techniques. It provides a description of 92 speech features where some of them are already widely used in this field of science and some of them have not been tried yet (they come from dif...
Preprint
Full-text available
This paper proposes a novel algorithm for multi-focus thermal image fusion. The algorithm is based on local activity analysis and advanced pre-selection of images into fusion process. The algorithm improves the object temperature measurement error up to 5 Celsius degrees. The proposed algorithm is evaluated by half total error rate, root mean squar...
Preprint
Full-text available
In this paper we present a new thermographic image database suitable for the analysis of automatic focus measures. This database consists of 8 different sets of scenes, where each scene contains one image for 96 different focus positions. Using this database we evaluate the usefulness of six focus measures with the goal to determine the optimal foc...
Preprint
Full-text available
Parkinson's disease (PD) is the second most frequent neurodegenerative disease with prevalence among general population reaching 0.1-1 %, and an annual incidence between 1.3-2.0/10000 inhabitants. The mean age at diagnosis of PD is 55 and most patients are between 50 and 80 years old. The most obvious symptoms are movement-related; these include tr...
Preprint
Full-text available
In order to develop infocommunications devices so that the capabilities of the human brain may interact with the capabilities of any artificially cognitive system a deeper knowledge of aging is necessary. Especially if society does not want to exclude elder people and wants to develop automatic systems able to help and improve the quality of life o...
Preprint
Full-text available
Background: An advantageous property of behavioural signals ,e.g. handwriting, in contrast to morphological ones, such as iris, fingerprint, hand geometry, etc., is the possibility to ask a user for a very rich amount of different tasks. Methods: This article summarises recent findings and applications of different handwriting and drawing tasks in...
Preprint
Full-text available
In this paper we present a new database acquired with three different sensors (visible, near infrared and thermal) under different illumination conditions. This database consists of 41 people acquired in four different acquisition sessions, five images per session and three different illumination conditions. The total amount of pictures is 7.380 pi...
Preprint
Full-text available
In this paper we present a method to identify people by means of thermal (TH) and visible (VIS) hand images acquired simultaneously with a TESTO 882-3 camera. In addition, we also present a new database specially acquired for this work. The real challenge when dealing with TH images is the cold finger areas, which can be confused with the acquisiti...
Preprint
Full-text available
Introduction Existing literature about online handwriting analysis to support pathology diagnosis has taken advantage of in-air trajectories. A similar situation occurred in biometric security applications where the goal is to identify or verify an individual using his signature or handwriting. These studies do not consider the distance of the pen...
Article
Full-text available
The development of non-intrusive technologies to perform continuous health monitoring and enable automatic warnings is a challenging current issue. Behavioral biometrics such as speech, handwriting, and gait can play a crucial role. In fact, these signals convey several components: • The one related to the physical part which enables the user to...
Book
Full-text available
This book focuses on graphomotor skills, their disorders and brings new possibilities to their diagnosis. The introduction discusses various theories of writing and the development of graphomotor skills and writing. It also defines graphomotor disorders and developmental dysgraphia and offers an overview of diagnostic methods for assessing handwrit...
Article
Full-text available
Introduction Impaired copy of intersecting pentagons from the Mini-Mental State Examination (MMSE), has been used to assess dementia in Parkinson's disease (PD). We used a digitizing tablet during the pentagon copying test (PCT) as a potential tool for evaluating early cognitive deficits in PD without major cognitive impairment. We also aimed to un...
Article
Full-text available
Advantageous property of behavioural signals (e.g. handwriting), in contrast to morphological ones (e.g. iris, fingerprint, hand geometry), is the possibility to ask a user to perform many different tasks. This article summarises recent findings and applications of different handwriting/drawing tasks in the field of security and health. More specif...
Article
Full-text available
Writing is a complex skill. Issues in this process, which are usually associated with developmental dysgraphia (DD), could consistently cause problems in everyday life, like for example, lower self-esteem and poorer academic achievement. That is why the correct diagnosis of DD is crucial for further child development. DD belongs to the category of...
Article
Full-text available
Background. Hypokinetic dysarthria is a common but difficult-to-treat symptom of Parkinson’s disease (PD). Objectives. We evaluated the long-term effects of multiple-session repetitive transcranial magnetic stimulation on hypokinetic dysarthria in PD. Neural mechanisms of stimulation were assessed by functional MRI. Methods. A randomized parallel-g...
Article
Background: We aimed to confirm the "Mozart effect" in epileptic patients using the intracerebral EEG recordings and the hypothesis that the reduction of epileptiform discharges (ED) can be explained by the music's acoustic properties. Methods: Eighteen epilepsy surgery candidates were implanted with depth electrodes in the temporal medial and l...
Article
Introduction Hypokinetic dysarthria (HD) is common in Parkinson’s disease (PD). Our objective was to evaluate articulatory networks and their reorganization due to PD pathology in individuals without overt speech impairment using a multimodal MRI protocol and acoustic analysis of speech. Methods A total of 34 PD patients with no subjective HD comp...
Chapter
In this paper we summarize several applications based on thermal imaging. We emphasize the importance of emissivity adjustment for a proper temperature measurement. A new set of face images acquired at different emissivity values with steps of 0.01 is also presented and will be distributed for free for research purposes. Among the utilities, we can...
Article
Full-text available
Parkinson’s disease (PD) is the second most frequent neurodegenerative disease associated with several motor symptoms, including alterations in handwriting, also known as PD dysgraphia. Several computerized decision support systems for PD dysgraphia have been proposed, however, the associated challenges require new approaches for more accurate diag...
Article
Full-text available
Background: Diffusion kurtosis imaging has been applied to evaluate white matter and basal ganglia micro-structure in mixed Parkinson's disease (PD) groups with inconclusive results. Objectives: To evaluate specific patterns of kurtosis changes in PD and to assess the utility of diffusion imaging in differentiating between healthy subjects and cogn...
Article
Full-text available
Automatic objective non-invasive detection of pathological voice based on computerized analysis of acoustic signals can play an important role in early diagnosis, progression tracking, and even effective treatment of pathological voices. In search towards such a robust voice pathology detection system, we investigated three distinct classifiers wit...
Article
Full-text available
The Table 3 was published incorrectly in the original publication of the article.
Article
Speech is controlled by axial neuromotor systems, therefore, it is highly sensitive to the effects of neurodegenerative illnesses such as Parkinson's Disease (PD). Patients suffering from PD present important alterations in speech, which are manifested in phonation, articulation, prosody, and fluency. These alterations may be evaluated using statis...