Jeremy B C Jackson

• Smithsonian Institution

Historical ecology draws on a broad range of information sources and methods to provide insight into ecological and social change, especially over the past ~12,000 yr. While its results are often relevant to conservation and restoration, insights from its diverse disciplines, environments, and geographies have frequently remained siloed or underrep...

Isolation of the Caribbean Sea from the tropical Eastern Pacific by uplift of the Isthmus of Panama in the late Pliocene was associated with major, taxonomically variable, shifts in Caribbean biotic composition, and extinction, but inferred causes of these biological changes have remained elusive. We addressed this through falsifiable hypotheses ab...

Hotspots of tropical marine biodiversity are areas that harbour disproportionately large numbers of species compared to surrounding regions. The richness and location of these hotspots have changed throughout the Cenozoic. Here, we review the global dynamics of Cenozoic tropical marine biodiversity hotspots, including the four major hotspots of the...

The mass die-off of Caribbean corals has transformed many of this region’s reefs to macroalgal-dominated habitats since systematic monitoring began in the 1970s. Although attributed to a combination of local and global human stressors, the lack of long-term data on Caribbean reef coral communities has prevented a clear understanding of the causes a...

The mass die-off of Caribbean corals has transformed many of this region’s reefs to macroalgal-dominated habitats since systematic monitoring began in the 1970s. Although attributed to a combination of local and global human stressors, the lack of long-term data on Caribbean reef coral communities has prevented a clear understanding of the causes a...

The mass mortality of acroporid corals has transformed Caribbean reefs from coral- to macroalgal-dominated habitats since systematic monitoring began in the 1970s. Declines have been attributed to overfishing, pollution, sea urchin and coral disease, and climate change, but the mechanisms are unresolved due to the dearth of pre-1970s data. We used...

Marine biodiversity in the Coral Triangle is several times higher than anywhere else, but why this is true is unknown because of poor historical data. To address this, we compared the first available record of fossil cheilostome bryozoans from Indonesia with the previously sampled excellent record from the Caribbean. These two regions differ severa...

Massive declines in population abundances of marine animals have been documented over century-long time scales. However, analogous loss of spatial extent of habitat-forming organisms is less well known because georeferenced data are rare over long time scales, particularly in subtidal, tropical marine regions. We use high-resolution historical naut...

Coral reefs support immense biodiversity and provide important ecosystem services to many millions of people. Yet reefs are degrading rapidly in response to numerous anthropogenic drivers. In the coming centuries, reefs will run the gauntlet of climate change, and rising temperatures will transform them into new configurations, unlike anything obse...

The Indo-Australian Archipelago (IAA) is the global centre of tropical marine biodiversity where species richness of most major animal taxa is several times higher than anywhere else. However, when and why this difference arose is unknown. We have addressed this question using extensive new and museum collections of fossil cheilostomes from the IAA...

The formation of the Isthmus of Panama stands as one of the greatest natural events of the Cenozoic, driving profound biotic transformations on land and in the oceans. Some recent studies suggest that the Isthmus formed many millions of years earlier than the widely recognized age of approximately 3 million years ago (Ma), a result that if true wou...

Changes in the physical environment are major drivers of evolutionary change, either through direct effects on the distribution and abundance of species or more subtle shifts in the outcome of biological interactions. To investigate this phenomenon, we built a fossil data set of drilling gastropod predation on bivalve prey for the last 11 Myr to de...

The fossil record displays remarkable stasis in many species over long time periods, yet studies of extant populations often reveal rapid phenotypic evolution and genetic differentiation among populations. Recent advances in our understanding of the fossil record and in population genetics and evolutionary ecology point to the complex geographic st...

For more than 30 years the Panama Paleontology Project (PPP) has made use of the fossil record of Tropical America to reveal patterns of environmental and biotic change over the last 12 million years. Most PPP studies have focused on a single taxonomic group or a distinct metric of environmental or ecological change. Here we present the Tropical Am...

We documented changes in the relative abundance of bivalve genera and functional groups in the southwest Caribbean over the past 11 Myr to determine their response to oceanographie changes associated with the closure of the Central American Seaway ca. 3.5 Ma. Quantitative bulk samples from 29 localities yielded 106,000 specimens in 145 genera. All...

Ecology Letters (2012) Caribbean reef corals have declined precipitously since the 1980s due to regional episodes of bleaching, disease and algal overgrowth, but the extent of earlier degradation due to localised historical disturbances such as land clearing and overfishing remains unresolved. We analysed coral and molluscan fossil assemblages from...

Until recently, large apex consumers were ubiquitous across the globe and had been for millions of years. The loss of these animals may be humankind’s most pervasive influence on nature. Although such losses are widely viewed as an ethical and aesthetic problem, recent research reveals extensive cascading effects of their disappearance in marine, t...

The Deepwater Horizon (DWH) well blowout released more petroleum hydrocarbons into the marine environment than any previous U.S. oil spill (4.9 million barrels), fouling marine life, damaging deep sea and shoreline habitats and causing closures of economically valuable fisheries in the Gulf of Mexico. A suite of pollutants — liquid and gaseous petr...

The collapse of human societies has commonly involved unsustainable overexploitation of resources and rapid population growth, followed by an environmental catastrophe, such as a prolonged drought, that destroyed the remaining resources. Collapse was sometimes averted by expansion into new territories to tap unexploited resources, which served as s...

Major macroevolutionary events in the history of the oceans are linked to changes in oceanographic conditions and environments on regional to global scales. Even small changes in climate and productivity, such as those that occurred after the rise of the Isthmus of Panama, caused major changes in Caribbean coastal ecosystems and mass extinctions of...

Phase-shifts from one persistent assemblage of species to another have become increasingly commonplace on coral reefs and in many other ecosystems due to escalating human impacts. Coral reef science, monitoring and global assessments have focused mainly on producing detailed descriptions of reef decline, and continue to pay insufficient attention t...

The marine faunas of tropical America underwent substantial evolutionary turnover in the past 3 to 4 million years in response to changing environmental conditions associated with the rise of the Isthmus of Panama, but the ecological signature of changes within major clades is still poorly understood. Here we analyze the paleoecology of faunal turn...

Metrarabdotos Canu, 1914 and the related genera Escharoides Milne Edwards, 1836b, Adeonellopsis MacGillivray, 1886, and Reptadeonella Busk, 1884 were key taxa in the decline of Bryozoa with erect, arborescent colonies and concomitant increase in numbers of species with encrusting colonies in the late Paleogene and Neogene of tropical America. In pa...

The excellent fossil record of the past few million years, combined with the overwhelming similarity of the biota to extant species, provides an outstanding opportunity for understanding paleoecological and macroevolutionary patterns and processes within a rigorous biological framework. Unfortunately, this potential has not been fully exploited bec...

The great mass extinctions of the fossil record were a major creative force that provided entirely new kinds of opportunities for the subsequent explosive evolution and diversification of surviving clades. Today, the synergistic effects of human impacts are laying the groundwork for a comparably great Anthropocene mass extinction in the oceans with...

The Panama Canal is near its vessel size and tonnage handling capacity, and Panamanians have decided to expand it. The expansion of the Canal may consider the historical long-lasting impacts on marine coastal habitats particularly on sensitive coral reefs. These potential impacts were discussed during the national referendum as were other equally i...

  Cupuladriid cheilostome bryozoans can make new colonies both sexually and asexually. Sexual (aclonal) colonies are derived from larvae while asexual (clonal) colonies result from the fragmentation or division of larger colonies. A number of specialised morphologies exist which either enhance or discourage clonality, and cupuladriids preserve thes...

The relationship between natural variations in coral species diversity, reef development, and ecosystem function on coral reefs is poorly understood. Recent coral diversity varies 10-fold among geographic regions, but rates of reef growth are broadly similar, suggesting that diversity is unimportant for reef development. Differences in diversity ma...

We used up to 30 morphological characters to discriminate and describe species of the genus Discoporella based on complete colony specimens collected from both coasts of the Isthmus of Panama. The characters included zooidal characters and colony-level characters such as colony size and basal granule density. Species were classified by a series of...

The striking health of remote coral reefs provides clear evidence that protection from local overfishing and pollution can help mitigate the impacts of global warming.

Historical accounts of shark abundance in the Line Islands. (0.05 MB DOC)

Annual Fish Catch for Export on Kiritimati (0.66 MB TIF)

Aquarium reef fish catch for export at Kiritimati (April–December, 2005). (0.03 MB DOC)

Non-coral invertebrate abundance on the northern Line Islands. (0.12 MB DOC)

Non-coral invertebrate data analysis: Median test for comparison of species abundance between atolls. (0.05 MB DOC)

Map of the central Pacific, including atolls of the Line and Phoenix Islands. Colors reflect mean sea surface temperatures for August 2005. Note the latitudinal gradient of temperature determined by meeting of the equatorial current and countercurrent (3.43 MB TIF)

The gradient of human disturbance in the northern Line Islands: Population, fishing, and waste. (0.05 MB DOC)

Population data for the northern Line Islands (0.05 MB TIF)

Total annual reef fish catch at Kiritimati (0.68 MB TIF)

Effective conservation requires rigorous baselines of pristine conditions to assess the impacts of human activities and to evaluate the efficacy of management. Most coral reefs are moderately to severely degraded by local human activities such as fishing and pollution as well as global change, hence it is difficult to separate local from global eff...

The late Neogene was a time of major environmental change in Tropical America. Global cooling and associated oceanographic reorganization and the onset and intensification of glaciation in the Northern Hemisphere during the past ten million years coincided with the uplift of the Central American isthmus and resulting changes in regional oceanograph...

We show that globally declining fisheries catch trends cannot be explained by random processes and are consistent with declining stock abundance trends. Future projections are inherently uncertain but may provide a benchmark against which to assess the effectiveness of conservation measures. Marine reserves and fisheries closures are among those me...

The Research Article Impacts of biodiversity loss on ocean ecosystem services By B. Worm et al. (3 Nov. 2006, p. [787][1]) projects that 100 of seafood-producing species stocks will collapse by 2048. The projection is inaccurate and overly pessimistic. ![Figure][2] CREDIT: DIGITAL VISION/

Paleontologists typically treat major episodes of extinction as single and distinct events in which a major environmental perturbation results in a synchronous evolutionary response. Alternatively, the causes of biotic change may be multifaceted and extinction may lag behind the changes ultimately responsible because of nonlinear ecological dynamic...

This year’s Kyoto prize signals the long overdue recognition of the fundamental interdependence of economic and ecologic systems for the protection and maintenance of ecosystem services and human well-being. Levin (2006) and Vincent (2007) point to several of the more important ways that interdisciplinary approaches will be essential to the better...

Human-dominated marine ecosystems are experiencing accelerating loss of populations and species, with largely unknown consequences. We analyzed local experiments, long-term regional time series, and global fisheries data to test how biodiversity loss affects marine ecosystem services across temporal and spatial scales. Overall, rates of resource co...

The collapse of Caribbean coral reefs has been attributed in part to historic overfishing, but whether fish assemblages can recover and how such recovery might affect the benthic reef community has not been tested across appropriate scales. We surveyed the biomass of reef communities across a range in fish abundance from 14 to 593 g m(-2), a gradie...

Almost all fisher models assume time-invariant parameter values of the underlying biological growth function except for an i.i.d. error term. We examine the economic implications of cyclical growth parameters in both single and multi-species models, which are frequently observed in many real-world fisheries. Neither optimal harvest rates nor optima...

The recent mass mortality of Caribbean reef corals dramatically altered reef community structure and begs the question of the past stability and persistence of coral assemblages before human disturbance began. We report within habitat stability in coral community composition in the Pleistocene fossil record of Barbados for at least 95 000 years des...

Estuarine and coastal transformation is as old as civilization yet has dramatically accelerated over the past 150 to 300 years. Reconstructed time lines, causes, and consequences of change in 12 once diverse and productive estuaries and coastal seas worldwide show similar patterns: Human impacts have depleted >90% of formerly important species, des...

The increased application of abundance data embedded within a more detailed and precise environmental context is enabling paleontologists to explore more rigorously the dynamics and underlying processes of ecological and evolutionary change in deep time. Several recent findings are of special theoretical interest. Community membership is commonly m...

There is confusion about the comparative diversity of mollusks on opposite sides of the Isthmus of Panama due to inadequate sampling and contrasting patterns of diversity for different molluscan taxa. We report here on the occurrence of scallops (Bivalvia: Pectinidae) from extensive new dredge sample collections from the Gulf of Panama and Gulf of...

We used up to 28 morphological characters to discriminate and describe species of the genus Cupuladria based on entire colony specimens collected from both coasts of the Isthmus of Panama. The characters included a combination of zooidal features traditionally used in cheilostome taxonomy and nontraditional characters Such as colony size, shape, an...

The fossil record displays remarkable stasis in many species over long time periods, yet studies of extant populations often reveal rapid phenotypic evolution and genetic differentiation among populations. Recent advances in our understanding of the fossil record and in population genetics and evolutionary ecology point to the complex geographic st...

Conservation of U.S. coral reefs has been sidetracked by the partial implementation of management plans without clearly achievable goals. Historical ecology reveals global patterns of coral reef degradation that provide a framework for reversing reef decline with ecologically meaningful metrics for success. The authors of this Policy Forum urge act...

Standard fisheries models used in economics and for management purposes almost always assume parameter values of the fishing system are stable. In this paper, we put forth models where the parameters of the biological growth model systematically change over time. The models considered are fundamentally different from those in the literature (e.g.,...

Cupuladriid bryozoans are able to produce new colonies both sexually through the production of larvae and asexually via fragmentation. The prevalence of asexual propagation and the physical and biological processes of fragmentation in cupuladriid species are currently little understood. In a large survey comprising collections of nearly 32 000 cupu...

Ocean circulation changed profoundly in the late Cenozoic around tropical America as a result of constriction and final closure of the Central American seaway. In response, regional planktonic productivity is thought to have decreased in the Caribbean Sea. Previous studies have shown that shallow-marine communities reflect these changes by reorgani...

The diversity, frequency, and scale of human impacts on coral reefs are increasing to the extent that reefs are threatened globally. Projected increases in carbon dioxide and temperature over the next 50 years exceed the conditions under which coral reefs have flourished over the past half-million years. However, reefs will change rather than disap...

Degradation of coral reef ecosystems began centuries ago, but there is no global summary of the magnitude of change. We compiled records, extending back thousands of years, of the status and trends of seven major guilds of carnivores, herbivores, and architectural species from 14 regions. Large animals declined before small animals and architectura...

Genetic data were used to identify Recent species of free-living bryozoans (Cupuladriidae) from both sides of the Isthmus of Panama, and to examine their phylogenetic relationships, species richness, and population structures. An approximately 480bp fragment of the 16S mitochondrial rRNA gene was sequenced from 182 individuals from Panama, the Gulf...

Two highly environmentally contrasting localities on either side of the Isthmus of Panama were chosen to investigate the response of zooid size to differing seasonal regimes within colonies of cupuladriid bryozoans. The Bocas del Toro region in the southern Caribbean experiences a very low mean annual range of temperature (MART) while, as a result...

Molluscan faunal turnover in the Plio-Pleistocene of the tropical western Atlantic has been attributed to drops in temperature or primary productivity, but these competing hypotheses have not been assessed ecologically. To test these alternatives, we compiled data on changing molluscan life habits and trophic composition over 12 million years deriv...

With all the recent advances in molecular and evolutionary biology, one could almost wonder why we need the fossil record. Molecular sequence data can resolve taxonomic relationships, experiments with fruit flies demonstrate evolution and development in real time, and field studies of Galapagos finches have provided the strongest evidence for natur...

The increase in oceanic biodiversity over the past half billion years is poorly understood despite the great importance of the pattern for understanding the history of life. Compilations of genera from the paleontological literature for the entire Phanerozoic (~540 million years) include only half the number of fossilizable taxa that occur in the o...

Ecological extinction caused by overfishing precedes all other pervasive human disturbance to coastal ecosystems, including pollution, degradation of water quality, and anthropogenic climate change. Historical abundances of large consumer species were fantastically large in comparison with recent observations. Paleoecological, archaeological, and h...

Ecological extinction caused by overfishing precedes all other pervasive human disturbance to coastal ecosystems, including pollution, degradation of water quality, and anthropogenic climate change. Historical abundances of large consumer species were fantastically large in comparison with recent observations. Paleoecological, archaeological, and h...

Three new Miocene-Pliocene species of the cheilostome bryozoan Metrarabdotos from Venezuela are atypical in showing significant evidence that as many as half the colonies originated asexually (clonally) by “regeneration” from previously existing colonies, rather than almost exclusively from ancestrular zooids (products of metamorphosis of sexually...

Geminate species are morphologically similar sister-species found on either side of the Isthmus of Panama. The existence of all geminates in the tropical Eastern Pacific ocean and the Caribbean Sea is most often explained by vicariance: closure of the Central American Seaway 3.1 to 3.5 Ma simultaneously isolated populations of species with amphi-Am...

Three new Miocene-Pliocene species of the cheilostome bryozoan Metrarabdotos from Venezuela are atypical in showing significant evidence that as many as half the colonies originated asexually (clonally) by “regeneration” from previously existing colonies, rather than almost exclusively from ancestrular zooids (products of metamorphosis of sexually...

Geminate species are morphologically similar sister-species found on either side of the Isthmus of Panama. The existence of all geminates in the tropical Eastern Pacific ocean and the Caribbean Sea is most often explained by vicariance: closure of the Central American Seaway 3.1 to 3.5 Ma simultaneously isolated populations of species with amphi-Am...

The Quaternary fossil record of living coral reefs is fundamental for understanding modern ecological patterns. Living reefs generally accumulate in place, so fossil reefs record a history of their former biological inhabitants and physical environments. Reef corals record their ecological history especially well because they form large, resistant...

The Quaternary fossil record of living coral reefs is fundamental for understanding modern ecological patterns. Living reefs generally accumulate in place, so fossil reefs record a history of their former biological inhabitants and physical environments. Reef corals record their ecological history especially well because they form large, resistant...

The excellent fossil record of the past few million years, combined with the overwhelming similarity of the biota to extant species, provides an outstanding opportunity for understanding paleoecological and macroevolutionary patterns and processes within a rigorous biological framework. Unfortunately, this potential has not been fully exploited bec...

The excellent fossil record of the past few million years, combined with the overwhelming similarity of the biota to extant species, provides an outstanding opportunity for understanding paleoecological and macroevolutionary patterns and processes within a rigorous biological framework. Unfortunately, this potential has not been fully exploited bec...

 We investigated the degree to which component grains vary with depositional environment in sediments from three reef habitats from the Pleistocene (125 ka) Hato Unit of the Lower Terrace, Curaçao, Netherlands Antilles: windward reef crest, windward back reef, and leeward reef crest. The windward reef crest sediment is the most distinctive, dominat...

How were the tropical Americas formed? This ambitious volume draws on extensive, multidisciplinary research to develop new views of the geological formation of the isthmus linking North and South America and of the major environmental changes that reshaped the Neotropics to create its present-day marine and terrestrial ecosystems. Recent discoverie...

History shows that Caribbean coastal ecosystems were severely degraded long before ecologists began to study them. Large vertebrates such as the green turtle, hawksbill turtle, manatee and extinct Caribbean monk seal were decimated by about 1800 in the central and northern Caribbean, and by 1990 elsewhere. Subsistence over-fishing subsequently deci...