
Jakub Hofman- Professor
- Professor at Masaryk University
Jakub Hofman
- Professor
- Professor at Masaryk University
About
109
Publications
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Introduction
I have been working for over 25 years as a scientist and university teacher at the Research Centre for Toxic Compounds in the Environment (RECETOX, www.recetox.muni.cz) headed by Prof. Jana Klánová. I lead the research group for soil environmental chemistry and toxicology. Our main area of interest lies in understanding the fate and behaviour of contaminants in the soil and their interactions with soil biota. We maintain close cooperation with several Czech and several foreign research groups (e.g. Prof. Geissen and Prof. Ritsema at Wacheningen University, NL; Prof. Luca Nizzetto from NIVA, NO; Dr. Kah at University of Auckland, AT; Prof. Semple group at Lancaster University, UK; Dr. Römbke at ECT GmbH, Germany and others – see the list below). There are several main topics which our group’s research focuses on.
We have been involved in several soil monitoring programmes with the aim to measure the levels of pollutants (persistent organic pollutants - PAHs, PCBs, DDT, HCB, HCH and others, heavy metals and recently also currently used pesticides - CUPs) in soils. The results have been processed using modelling, mapping and calculation of risks.
In the past projects, we have also studied soil biological quality (bioindication) by the means of monitoring soil microbiological parameters (microbial biomass, C mineralization, N mineralization, functional diversity etc.). In several monitoring studies in different areas we have investigated the relationships between soil properties, soil contamination, and microbial characteristics. There, we have studied the impacts of different types of anthropogenic stress on soil: the effect of industry, traffic, agronomy, salinization, etc.
In laboratory studies, we have studied the effects of persistent organic pollutants (POPs), heavy metals and currently used pesticides on soil organisms. The results have been used to add information to the ecotoxicological profiles of these compounds. Our methods involve toxicity tests with soil microorganisms, invertebrates (nematodes, springtails, enchytraeids, earthworms, snails, etc.) and plants.
We are directing our attention at research into the effects of complex mixtures on soil organisms. Dredged sediments application on soil has been studied as an example. Composting and vermicomposting of industrial wastes has been studied too.
We are interested in the bioavailability of chemicals in soil, particularly the impact of soil properties and aging on bioavailability. Our interest lies in investigating the methods suitable for bioavailability determination (bioaccumulation in earthworms and plants, passive samplers like HPCD, SPME, SBSE, SFE, XAD, and so forth), research into relationships between bioaccumulation and toxicity, etc.
The newest research topic of the group focuses on biotechnology for waste processing, particularly using Hermetia illucens (black soldier fly) larvae for conversion of organic waste to a valuable protein-rich source.
Current institution
Publications
Publications (109)
The application of multiple pesticides over the last decades has resulted in their frequent and in some cases long-term presence in soils as complex mixtures. This work assessed the toxicity of realistic pesticide mixtures observed in 11 case study sites to the springtail Folsomia candida. Each mixture was composed of 5 pesticides (as active substa...
Modern agriculture relies heavily on pesticide use to meet the demands of food quality and quantity. Therefore,
pesticides are often applied in mixtures, leading to a diverse cocktail of chemicals and their metabolites in soils,
which can affect non-target organisms such as soil microorganisms. Pesticides are tested for their single effects,
but st...
The presence of pesticide residues in waterbed sediments poses a significant concern for aquatic ecosystems’ health. This study examined pesticide contamination in sediments of 38 water bodies, embedded in agricultural-dominated regions, across eight European countries. Three indicators were targeted: occurrence, type, and concentrations of multipl...
During the growing season of 2021, 201 soil samples from conventionally and organically managed fields from 10 European countries and 8 cropping systems were taken, and 192 residues of synthetic pesticides were analyzed. Pesticide residues were found in 97% of the samples, and 88% of the samples contained mixtures of at least 2 substances. A maximu...
There is an increasing imperative to explore safer alternatives for pesticides due to their indiscriminate use and consequential health impacts on the environment and humans. Nanoformulations of pesticides are being developed as potential alternatives due to their beneficial properties, including enhanced solubility, targeted delivery to the site o...
Pesticides threaten biodiversity, but we know little about how they permeate food webs. Few studies have investigated the number, concentration, and composition of pesticides in agroecosystem food webs even though agroecosystems cover one-third of Earth's land area. We conducted a pioneering study on the distribution of pesticides across local (i.e...
The growing pressure to reduce excessive pesticide use has led to exploring novel formulation methods, including nanoparticle carriers for active substances. However, these emerging nanopesticides need a thorough evaluation compared to current formulations to determine whether their “nano” properties intensify toxicity for non-target organisms. Thi...
Novel formulations for pesticides based on nano-sized carriers loaded with active substances (i.e., nanopesticides) have been developed in recent years to enhance the technical, environmental, and toxicological properties of pesticides....
Intensive and widespread use of pesticides raises serious environmental and human health concerns. The presence and levels of 209 pesticide residues (active substances and transformation products) in 625 environmental samples (201 soil, 193 crop, 20 outdoor air, 115 indoor dust, 58 surface water, and 38 sediment samples) have been studied. The samp...
In the agriculture sector, nanoformulations of agrochemical are being produced to address the overuse & drawbacks of conventional formulations of agrochemicals e.g., low solubility, degradation, toxicity. To address the demand for healthy and
harmless products, nanopesticides (NPs) risk assessment to non-target organisms need to be evaluated carefu...
Nanopesticides (NPs) are considered less environmentally harmful formulations compared to existing conventional plant production products, able to control better the exposure of pests, reduce the total amount of pesticides consumed, and increase the environmental balance in agriculture. However, like any other new materials, these new nanoformulati...
Long-term exposure to polycyclic aromatic hydrocarbons (PAHs) and their nitrated (NPAHs) and oxygenated (OPAHs) derivatives can cause adverse health effects due to their carcinogenicity, mutagenicity and oxidative potential. The distribution of PAH derivatives in the terrestrial environment has hardly been studied, although several PAH derivatives...
Nanopesticides as a potential solution to solve the risk and drawbacks of conventional formulations of pesticides have been attracting attention in both research and market areas. However, the risk of these new formulations still needs to be studied on non-target species and regulated specifically. In this regard, we prepared three nanopesticides c...
The study showed novel findings about changes in the fate and bioavailability of conazole fungicides (CFs) after biochar (BC) addition to soil. Two contrasting soils (low- and high-sorbing of CF; L soils, H soils) were amended by three BCs (low-, moderate-, and high-sorbing of CF; L-BC, M-BC, H-BC) at 0.2% and 2% doses. Epoxiconazole (EPC) and tebu...
Release experiments of tebuconazole and terbuthylazine from various nanocarriers were performed by the dialysis method to estimate the durability of nanocarrier-active ingredient complexes.
The adverse effects of pesticides on the agricultural ecosystem have been matter of concern in recent decades. However, attention has mostly been directed to highly persistent chemicals leading to underestimating currently used pesticides. In this review we present an overview of the studies on monitoring currently used pesticides in agricultural s...
Current farm systems rely on the use of Plant Protection Products (PPP) to secure high productivity and control threats to the quality of the crops. However, PPP use may have considerable impacts on human health and the environment. A study protocol is presented aiming to determine the occurrence and levels of PPP residues in plants (crops), animal...
Toxicokinetic studies appertain to the fundamental research of soil bioavailability. However, the research outcomes of aspects influencing uptake and elimination of hydrophobic organic compounds have not been summarized so far. In our review, a recapitulation of available toxicokinetic data (i.e. experimental conditions, if the steady state was rea...
Excessive use of pesticides in agriculture and its consequent damage have been economically, environmentally and morally controversial issue for years, leading to an increasing demand to find safe alternatives. Nanotechnology in agriculture, by offering chances to develop more effective agrochemicals, may have less impact
on the environment by incr...
Loading active ingredients on nanocarrier systems is becoming a common strategy for improving pesticide formulations. One of the most important properties of these nanoformulations is the proportion of pesticide associated with the nanocarriers (encapsulation efficiency, EE). EE is often determined by centrifugal ultrafiltration. However, the losse...
Biochar usage in agriculture becomes increasingly important for the improvement of soil properties. However, from the perspective of pesticides, biochar can influence exposure to pesticides of both target and non-target organisms and also pesticides’ fate in soil. Our study investigated degradation and bioaccumulation (in the Eisenia andrei earthwo...
By testing 92 different biochars, this study had the objective to determine the relations between simple physico-chemical characteristics of biochar (elemental composition, ash fraction, specific surface area, process parameters) and infrared sorption characteristics revealing the presence of specific functional groups. The results of Diffusive Ref...
The hazardous effects of pesticides on the ecosystem are indisputable. Many studies have been devoted to the monitoring of pesticides and their occurrence in various systems and the adverse effects that they impose on different parts of the environment. However, most of the efforts have been dedicated to very persistent chlorinated compounds. Other...
Conazole fungicides are currently used pesticides with considerable chronic toxicity and ecotoxicity that are also on EU list for substitution. They enter the soil forming short- or long-term residues. In this study two of their representatives, epoxiconazole (EPC) and tebuconazole (TBC), have been tested with 20 soils from the Czech Republic for t...
Widely used conazole fungicides (CFs) belong to the most frequently detected pesticides in Central European arable soils. However, data on their environmental behaviour and bioavailability to soil organisms are surprisingly scarce. In the present laboratory microcosm study prochloraz, tebuconazole, epoxiconazole and flusilazole were applied to 12 d...
This study presents monitoring data on the spatial and temporal occurrence of pesticide residues in arable soils of the Czech Republic and relates it to soil properties, pesticide usage and data on application provided by farmers. In total, 34 soils were sampled during 2014–2017, amounting to 136 samples which were analyzed for 60 pesticides and fo...
Laboratory studies of pollutant uptake kinetics commonly start shortly after experimental soil contamination when it is not clear if the processes between soil and chemicals are equilibrated and stabilized. For instance, when the concentration in soil quickly decreases due to initial biodegradation, bioaccumulation may show a peak-shape accumulatio...
Environmental context
Nanopesticides are increasingly being developed for agricultural use, but knowledge concerning their environmental fate and effects is limited. This microcosm study brings new results about soil fate and bioaccumulation of polymeric or lipid nanoparticles carrying chlorpyrifos or tebuconazole. The nanoformulations significantl...
The objective of this study is to characterize changes in the fate, behaviour and bioavailability of four conazole fungicides - CFs (prochloraz - PRO, tebuconazole - TEB, epoxiconazole – EPO, flusilazole - FLU) in 12 diverse agricultural soils in complex microcosm systems consisting of agriculturally-used fluvisols, plants (Lactuca sativa), earthwo...
Currently used pesticides (CUPs) represent one of the largest intentional inputs of potentially hazardous compounds into agricultural soils. Subsequently, pesticide residues (PRs) and their transformation products (TPs) persist in agricultural soils, occurring in diverse mixtures of compounds in various concentrations. In this study, measured envir...
Ionizing γ-irradiation and solvent-assisted spiking are frequently applied to eliminate microbial activity and to induce hydrophobic organic compounds (HOCs) into soil, respectively, when studying the accumulation of chemicals in terrestrial organisms. However, the side-effects that may arise from these treatments on soil-HOC interaction and, subse...
Epoxiconazole, tebuconazole, flusilazole, prochloraz, pendimethalin, and the atrazine transformation product (2-hydroxyatrazine) have been found in Czech arable soils at high detection frequencies and/or concentrations. As they have been shown to persist from one growing season to following ones, the question arises of whether they can be taken up...
The contact assay measuring the inhibition of Arthrobacter globiformis dehydrogenase activity as an endpoint to evaluate the toxicity of solid samples was tested in an international ring-test to validate its performance for ISO standardization (ISO/CD 18187). This work reports the results of the ring-test involving 9 laboratories from six countries...
Agriculture is today indispensably connected with enormous use of pesticides. Despite tough regulation, their entrance into soil cannot be excluded and they might enter soil organisms and plants and continue further to terrestrial food chains. This study was conducted to investigate the bioaccumulation of two pesticides currently used in large amou...
Although large amounts of pesticides are used annually and a majority enters the soil to form short- or long-term residues, extensive soil surveys for currently used pesticides (CUPs) are scarce. To determine the status of CUPs' occurrence in arable land in Central Europe, 51 CUPs and 9 transformation products (TPs) were analysed in 75 arable soils...
Bioaccumulation factors (BAFs) of organic pollutants to soil biota, often required by risk assessment, are mostly obtained in non-sterile laboratory-contaminated artificial soils. However, microbial degradation has been indicated by many authors to influence the fate of hydrophobic organic compounds (HOCs) in soils. A question arises if the microbi...
Artificial soil (AS) is used in soil ecotoxicology as a test medium or reference matrix. AS is prepared according to standard OECD/ISO protocols and components of local sources are usually used by laboratories. This may result in significant inter-laboratory variations in AS properties and, consequently, in the fate and bioavailability of tested ch...
Chlorotriazine herbicides (CTs) are widely used pest control chemicals. In contrast to groundwater contamination, little attention has been given to the circumstances of residue formation of parent compounds and transformation products in soils.
Extensive soil sampling and screening assessment of ecosystem risks combined with a multidimensional statistical analysis were used to estimate and spatially characterize the ecosystem risks stemming from the contamination of floodplain soils in the Czech Republic. We proved structural differences in regional pollution patterns where different regi...
Purpose
The scope of this article was to investigate the spatial and temporal variability of enantiomeric fractions (EFs) of persistent organic pollutants (POPs) in soil compared to the uncertainty of the analytical data.
Materials and methods
Soil samples were taken with high spatial resolution at two sites in Czech Republic in 2008 to investigate...
Sludge coming from remediation of groundwater contaminated by industry is usually managed as hazardous waste despite it might be considered for further processing as a source of nutrients. The ecotoxicity of phosphorus rich sludge contaminated with arsenic was evaluated after mixing with soil and cultivation with _Sinapis alba_, and supplementation...
The study compared the ability of various chemical methods (XAD, β-hydroxypropylcyclodextrin - HPCD) and solid phase micro-extraction (SPME)) to mimic earthworm uptake from two similar soils containing either spiked or aged p,p´-DDE, thus representing two extreme scenarios with regard to the length of pollutant-soil contact time and the way of cont...
The proper choice of exposure times is critical if the freely dissolved concentration of chemicals in soil porewater is to be measured via the equilibrium solid-phase microextraction (SPME) as the times to equilibrium may vary depending on compound and soil properties. To reveal the effects of compound hydrophobicity, ageing and soil organic matter...
The presented study investigates the use of passive sampling, i.e. solid phase microextraction with polydimethylsiloxane fibers (PDMS-SPME), to assess the bioavailability of fiver neutral organic chemicals (phenanthrene, pyrene, lindane, p,p'-DDT, and PCB 153) spiked to natural and artificial soils after different aging times. Contaminant bioavaila...
Hydrophobic organic contaminants in soils may pose toxicity or transfer to food chains after their uptake to soil biota. However, uptake data for earthworms are usually limited, as: (a) only fixed exposure times are studied instead of whole uptake kinetics and (b) studies including compounds with different environmental properties and more than two...
Artificial soil is an important standard medium and reference material for soil ecotoxicity bioassays. Recent studies have documented the significant variability of their basic properties among different laboratories. Our study investigated (i) the variability of ten artificial soils from different laboratories by means of the fate, extractability...
Purpose
The toxicity of 36 dredged sediments from the Czech Republic was investigated using a large battery of bioassays. The aim of this study was to investigate the feasibility of ecotoxicity testing in general and of individual bioassays more specific and to investigate how the results of bioassays are determined by the physicochemical propertie...
Road salting is used as a dominant way to keep road safety in winter, even in the protected natural areas. In our study, possible effects of winter road salting on soil microorganisms in close road vicinity were investigated. Soil chemical and microbial properties were monitored at a forest site in the Krkonoše Mountains national park and at a gras...
The close relationship between soil organic matter and the bioavailability of POPs in soils suggests the possibility of using it for the extrapolation between different soils. The aim of this study was to prove that TOC content is not a single factor affecting the bioavailability of POPs and that TOC based extrapolation might be incorrect, especial...
A set of 29 pond sediment samples were collected. The sediments were separated into three groups, field, village and forest pond sediments. The sediment samples were taken from pond bottoms and sediment heaps. The sediment characteristics (pH, CEC, Al-exchangeable, Cox, humus substances), the content of potentially risky elements and persistent org...
The aim of this study was to compare the toxic effects of selected two- and three-ringed PAHs (naphthalene, phenanthrene, and anthracene) and their N-heterocyclic analogs with one (quinoline, acridine, and phenanthridine) or two (quinoxaline, phenazine, and 1,10-phenanthroline) nitrogen atoms on the survival and reproduction of Enchytraeus crypticu...
Biomass of cyanobacterial water blooms including cyanobacterial toxins may enter soils, for example, when harvested water bloom is directly applied as an organic fertilizer or when water with massive cyanobacterial biomass is used for irrigation. In spite of this, no information is available about the potential effects on soil arthropods. The objec...
Unlabelled:
Contact bioassays are important for testing the ecotoxicity of solid materials. However, survival and reproduction tests are often not practical due to their duration which may last for several weeks. Avoidance tests with soil invertebrates may offer an alternative or extension to the classic test batteries due to their short duration...
Detailed soil screening data from the Czech Republic as a typical Central European country are presented here. Determination of a wide selection of organic and inorganic pollutants as well as an assessment of specific soil parameters allowed us to study the soil contamination in relation to the land use and soil properties. While HCHs and HCB were...
We investigated the effect of soil spatial variability within the sampling site scale, the effects of sample sieving (1, 2 and 4mm), and storage conditions up to 32 weeks (wet at 4 degrees C, -20 degrees C and air dried) on microbial biomass C, respiration, ammonification and nitrification activities in arable, grassland and forest soil. In general...
In our study, effects of fungicides mancozeb and dinocap on C and N mineralization were measured in arable and grassland soil. The soils were treated with these fungicides at the application and 10 times lower doses and then incubated at 20 °C for 2 weeks. Carbon mineralization (basal and substrate-induced respiration) and nitrogen mineralization (...
OECD artificial soil is a widely used substrate in soil toxicity tests. Despite its apparent necessity as a defined mixture relevant for solid phase exposure, several problematic issues have been revealed recently which must be considered seriously. It is not clear if the OECD artificial soil is really a standardized reference material omitting the...
In this study, avoidance response of Enchytraeus albidus to LUFA 2.2 soil contaminated with pesticide carbendazim was investigated. The aim was to clarify minimal test duration and temporal changes in avoidance response due to contamination ageing. Firstly, the concentration causing 50% avoidance (EC(50)) was determined as 7.6 mg/kg. Then, test dur...
The aim of this paper was to measure the changing desorbable fraction and bioaccessibility of phenanthrene in two different soils with increasing soil-phenanthrene contact time using supercritical fluid extractions (SFE). Both soils were spiked with 100 mg kg(-1) phenanthrene and aged for 28d. Desorption profiles were measured every 7d using select...
In this study, the effects of road salting on the quality of forest soils near the road were monitored in the Krkonoše Mountains (Czech Republic). Physical, chemical properties and microbial parameters of soils were determined and the toxic potentials of soil water extracts were evaluated using the bacterial tests (Microtox and Pseudomonas putida g...
In our study, effects of fungicides mancozeb and dinocap on C and N mineralization were measured in arable and grassland soil. The soils were treated with these fungicides at the application and 10 times lower doses and then incubated at 20 degrees C for 2 weeks. Carbon mineralization (basal and substrate-induced respiration) and nitrogen mineraliz...
Enantiomeric fractions (EF) of PCB 95, 132, 149, and 174, alpha-HCH, o,p'-DDD, and o,p'-DDT were analyzed in 112 soil samples using two-dimensional gas chromatography and triple-quadrupole mass spectrometry. To assess the soil conditions that facilitate enantioselective fractionation of chiral compounds, EF values of selected PCBs were further corr...
The characteristics of natural soils often vary from those of artificial soil (e.g. OECD), which may lead to substantial differences in the bioavailability of test substances. The aim of this investigation was to characterise the development of phenanthrene catabolism in both natural and artificial soils with varying total organic carbon (TOC) cont...
OECD artificial soil has been used routinely as a standardized substrate for soil toxicity tests. However, can be the fate, behaviour and effects of contaminants in artificial soil extrapolated to natural soils? The aim of our study was to verify this hypothesis by comparing the loss, extraction, and bioavailability of phenanthrene in three artific...
The aims of this study were: (i) to investigate the toxicity of N-heterocyclic polyaromatic hydrocarbons (NPAHs) quinoline, acridine, phenazine, and 1,10-phenanthroline to the soil invertebrates Eisenia fetida, Enchytraeus crypticus, Folsomia candida, and Caenorhabditis elegans, (ii) to compare the toxicity of four NPAHs and the species sensitivity...
A flood changed the character of the observed flooding terraces in the catchment area of the Dřevnice river and in an adjacent part of the Morava river in July 1997. The changes of the vegetation cover, selected soil parameters, and soil contamination were investigated before and after the flood. Changes of the vegetation cover were more perceptibl...
The polychlorinated insecticide toxaphene belonged to the most used pesticides in the 20th century. Even recently, significant residues have been found in soils at various sites in the world. However, knowledge on toxicity to soil organisms is limited. In this study, the effects of toxaphene on soil invertebrates Folsomia candida, Eisenia fetida, E...
Caenorhabditis elegans is a free-living soil nematode that is commonly used as a model for toxicity tests. The aim of this study was to investigate the toxicity of seven organic pollutants: four azaarenes (quinoline, acridine, phenazine, and 1,10-phenanthroline), short-chain chlorinated paraffins, and two organochlorinated pesticides (toxaphene and...
Despite the fact that chlorinated paraffins have been produced in relatively large amounts, and high concentrations have been found in sewage sludge applied to soils, there is little information on their concentrations in soils and the effect on soil organisms. The aim of this study was to investigate the toxicity of chlorinated paraffins in soils....
Background, Aims, and ScopeMore frequent occurrence of stronger floods in Europe as well as in other parts of the world in recent years raises major concern about the material damages, but also an important issue of contamination of the affected areas through flooding. The effects of major floods on levels and distribution of contamination with hyd...