Jaime Prohens

• Full Professor
• Professor (Full) at Polytechnic University of Valencia

The MEGGIC (Magic EGGplant InCanum) population here presented is the first highly inbred eggplant ( Solanum melongena ) multiparent advanced generation intercross (MAGIC) population developed so far, derived from seven cultivated accessions and one wild S. incanum from arid regions. The final 325 S5 lines were high-throughput genotyped using low-co...

Eggplant (Solanum melongena) research has been hindered by the lack of suitable model plants. The development of Micro-Mel and Mini-Mel, two short-cycle dwarf model lines with introgressions from the wild relative S. anguivi, represents a breakthrough in eggplant research. Both lines were characterized with 30 phenotypic descriptors and compared to...

Eggplant ( Solanum melongena ) is one of the four most important Solanaceous crops, widely cultivated and consumed in Asia, the Mediterranean basin, and Southeast Europe. We studied the genome‐wide association of historical genebank phenotypic data on a genotyped worldwide collection of 3449 eggplant accessions. Overall, 334 significant association...

Parasitic Meloidogyne incognita root-knot nematodes (RKNs) represent one of the most serious eggplant (Solanum melongena) biotic stress problems. We evaluated 47 eggplant genotypes, including three cultivated eggplant, 13 wild accessions, and 31 eggplant prebreeding materials (S. melongena introgressed with wild relatives), to determine their resis...

Eggplant ( Solanum melongena ) is one of the four most important Solanaceous crops, widely cultivated and consumed in Asia, the Mediterranean basin, and Southeast Europe. We studied the Genome-wide association (GWA) of historical genebank phenotypic data on a genotyped worldwide collection of 3,449 eggplant accessions. Overall, 334 significant asso...

Low-coverage whole-genome sequencing (lcWGS) presents a cost-effective solution for genotyping, particularly in applications requiring high marker density and reduced costs. In this study, we evaluated lcWGS for eggplant genotyping using eight founder accessions from the first eggplant MAGIC population (MEGGIC), testing various sequencing coverages...

The tomato mating system was strongly affected by domestication events. Mutations disrupting self-incompatibility paralleled by changes retracting the stigma position (SP) within the staminal cone conferred strict autogamy and self-fertility to the cultivated forms. Although major genes affecting these changes have been identified, SP control in do...

Tomato consumer liking results from the interaction between the fruit's characteristics and human senses, shaped by diversity among consumers regarding physiology, culture and past consumption experiences. Rather than a unique preference, consumers can be segmented into different sensory clusters (sensoclusters). This study investigates European co...

An enduring question in evolutionary biology concerns the degree to which episodes of convergent trait evolution depend on the same genetic programs, particularly over long timescales. In this work, we genetically dissected repeated origins and losses of prickles—sharp epidermal projections—that convergently evolved in numerous plant lineages. Muta...

Background The generation of new eggplant (Solanum melongena L.) cultivars with drought tolerance is a main challenge in the current context of climate change. In this study, the eight parents (seven of S. melongena and one of the wild relative S. incanum L.) of the first eggplant MAGIC (Multiparent Advanced Generation Intercrossing) population, to...

We developed a novel eight-way tomato multi-parental advanced generation inter-cross (MAGIC) population to improve the accessibility of tomato relatives genetic resources to geneticists and breeders. The inter-specific MAGIC population (ToMAGIC) was obtained by inter-crossing four accessions each of Solanum lycopersicum var. cerasiforme (SLC) and S...

The 'Tomata Valenciana' as a traditional tomato variety is affected by multiple diseases that limit its yield, and for which no genetic improvement has been made. Among the diseases that affect it most importantly are those caused by the Tomato mosaic virus (ToMV), the Tomato spotted wilt virus (TSWV), the fungus Fusarium oxysporum f. sp. Lycopersi...

The ‘Valencian Tomato’ is one of the traditional varieties of tomato with the most economic projection in current Valencian agriculture. Considering that this variety has not been the subject of genetic improvement, there are more and more problems with the incidence of diseases such as those caused by viruses and fungi in the cultivation fields of...

At the present communication realise an analysis of the costs at two productive models of Valencian tomato. We observe the differences and select the games of costs my affected in front of a possible improves genetics of the traditional varieties. Lastly it makes a forecast of the umbral of profitability of the new varieties at function of a series...

The cultivated materials of 'Tomata Valenciana' are the result of the selection carried out by Valencian farmers based on their morphological, agronomic and organoleptic qualities. The different varieties were differentiated according to the different agroclimatic conditions that occur in the Valencian Community. Thanks to this, there is a great we...

Aiming to evaluate the genetic diversity present in the ‘Tomata Valenciana’ germplasm, a collection of 50 entries sourced from the Banco de Germoplasma del Instituto Universitario de Conservación y Mejora de la Agrodiversidad Valenciana (COMAV) de la Universitat Politècnica de València (from now on Banco de Germoplasma COMAV-UPV) has been genotyped...

Enhancing plant adaptation to low input conditions is a fundamental goal for implementing sustainable agriculture. In the present study, two eggplant (Solanum melongena) accessions (MEL1 and MEL5), two introgression lines (ILs) derived from eggplant wild relatives S. dasyphyllum (IL-M1-D1) and S. insanum (IL-M5-I9), and a heterozygous version of th...

We developed a novel eight-way tomato multi-parental advanced generation inter-cross (MAGIC) population to improve the accessibility of the genetic resources of tomato relatives to geneticists and breeders. The inter-specific MAGIC population (ToMAGIC) was obtained by inter-crossing four accessions each of Solanum lycopersicum var. cerasiforme (SLC...

An enduring question in evolutionary biology concerns the degree to which episodes of convergent trait evolution depend on the same genetic programs, particularly over long timescales. Here we genetically dissected repeated origins and losses of prickles, sharp epidermal projections, that convergently evolved in numerous plant lineages. Mutations i...

Eggplant (Solanum melongena) is an important Solanaceous crop, widely cultivated and consumed in Asia, the Mediterranean basin, and Southeast Europe. Its domestication centers and migration and diversification routes are still a matter of debate. We report the largest georeferenced and genotyped collection to this date for eggplant and its wild rel...

European traditional tomato varieties have been selected by farmers given their consistent performance and adaptation to local growing conditions. Here we developed a multipurpose core collection, comprising 226 accessions representative of the genotypic, phenotypic and geographical diversity present in European traditional tomatoes, to investigate...

The development of new cultivars with improved nitrogen use efficiency (NUE) is key for implementing sustainable agriculture practices. Crop wild relatives (CWRs) provide valuable genetic resources for breeding programs aimed at achieving this goal. In this study, three eggplant (Solanum melongena) accessions together with their advanced backcrosse...

Eggplant (Solanum melongena) is a major vegetable crop with great potential for genetic improvement owing to its large and mostly untapped genetic diversity. Eggplant is closely related to over 500 species of Solanum subgenus Leptostemonum, belonging to its primary, secondary, and tertiary genepools, and exhibits a wide range of characteristics, in...

Recently, there has been a substantial increase in high‐throughput technologies that generate highly complex large datasets for use in the sciences. Plant breeding and genetics have benefited from this data explosion where many public and private institutions now implement genomic and phenomic data to predict performance thus informing germplasm se...

As access to irrigation water becomes increasingly limited, introgression of relevant genomic regions from drought-tolerant wild genotypes is a promising breeding strategy for crop plants. In this study, nine eggplant (Solanum melongena) introgression lines (ILs) covering altogether 71.6% of the genome of the donor wild relative parent S. incanum w...

The development of new cultivars with improved nitrogen use efficiency (NUE) is key for implementing sustainable agriculture practices. Crop wild relatives (CWRs) provide valuable genetic resources for breeding programs aimed at achieving this goal. In this study, three eggplant (Solanum melongena) accessions together with their advanced backcrosse...

The pear is an important fruit tree in temperate areas, but due to its sensitivity, fruit yield and quality are often affected by disease and pest attacks. Pear genotypes from a germplasm collection comprising 13 Pyrus species, 17 Romanian varieties, and 50 non-Romanian varieties from a worldwide assortment were investigated in this study. Througho...

Phenolic acids and flavonoids are large groups of secondary metabolites ubiquitous in the plant kingdom. They are currently in the spotlight due to the numerous health benefits associated with their consumption, as well as for their vital roles in plant biological processes and in plant-environment interaction. Tomato, eggplant and pepper are in th...

Unlike other major crops, little research has been performed on tomato for reducing generation time for speed breeding. We evaluated several agronomic treatments for reducing the generation time of tomato in the M82 (determinate) and Moneymaker (indeterminate) varieties and evaluated the best combination in conjunction with embryo rescue. In a firs...

Defence mechanisms to abiotic stresses, like drought, are very broad and RNA sequencing (RNA-Seq) can help in understanding the complex responses triggered. In this study, we performed RNA-Seq of the transcriptomes of eggplant (Solanum melongena) and its related wild species (S. dasyphyllum) under two PEG concentrations (20 % and 30 %), two differe...

In a climate change scenario, crop tolerance to drought must be urgently improved, as it represents an increasingly critical stress reducing agricultural yields worldwide. Although most crops are relatively sensitive to water stress, many of their wild relatives are more tolerant and may be used to improve drought tolerance in our crops. In this st...

Defence mechanisms to abiotic stresses, like drought, are very broad and RNA sequencing (RNA-Seq) can help in understanding the complex responses triggered. In this study, we performed RNA-Seq of the transcriptomes of eggplant (Solanum melongena) and its related wild species (S. dasyphyllum) under two PEG concentrations (20% and 30%), two different...

Understanding the mechanisms by which chlorophylls are synthesized in the eggplant (Solanum melongena) fruit peel is of great relevance for eggplant breeding. A multi-parent advanced generation inter-cross (MAGIC) population and a germplasm collection have been screened for green pigmentation in the fruit peel and used to identify candidate genes f...

Lowering nitrogen inputs is a major goal for sustainable agriculture. In the present study, a set of 10 Solanum melongena introgression lines (ILs) developed using S. incanum as the exotic donor parent were grown under two nitrogen fertilization doses supplied with the irrigation system: 1) 8.25 mmol · L⁻¹ NH4NO3, corresponding to the high nitrogen...

The Adapting Agriculture to Climate Change Project set out to improve the diversity, quantity, and accessibility of germplasm collections of crop wild relatives (CWR). Between 2013 and 2018, partners in 25 countries, heirs to the globetrotting legacy of Nikolai Vavilov, undertook seed collecting expeditions targeting CWR of 28 crops of global signi...

The agricultural scenario of the upcoming decades will face major challenges for the increased and sustainable agricultural production and the optimization of the efficiency of water and fertilizer inputs. Considering the current and foreseen water scarcity in several marginal and arid areas and the need for a more sustainable farming production, t...

Increased interest in tomato (Solanum lycopersicum L.) production requires breeding to create new cultivars with highly marketable values (e.g., regarding quality, nutrition, and health) and valuable sensorial parameters. The purpose of this research was to compare four tomato commercial hybrids—two newly created and two used as controls in the bre...

The Mediterranean basin countries are considered secondary centres of tomato diversification. However, information on phenotypic and allelic variation of local tomato materials is still limited. Here we report on the evaluation of the largest traditional tomato collection, which includes 1499 accessions from Southern Europe. Analyses of 70 traits r...

This Global Strategy for the Conservation and Use of Eggplants includes not only priority actions for conservation, but also for the use of the diversity. This strategy is the result of a collaborative effort and has been made possible thanks to the many contributors who provided information and participated in discussions.

A comprehensive collection of 1254 tomato accessions, corresponding to European traditional and modern varieties, early domesticated varieties, and wild relatives, was analyzed by genotyping by sequencing. A continuous genetic gradient between the traditional and modern varieties was observed. European traditional tomatoes displayed very low geneti...

Marigolds (Tagetes spp.) are multifunctional flowering plants belonging to the Asteraceae family, well-known and widespread for their ornamental value and many other uses. In this study, morphological differences and genetic relationships among 21 cultivars of three species of marigold (Tagetes patula, T. erecta and T. tenuifolia) were analysed. Re...

Multi-parent advanced generation inter-cross (MAGIC) populations facilitate the genetic dissection of complex quantitative traits in plants and are valuable breeding materials. We report the development of the first eggplant MAGIC population (S3 Magic EGGplant InCanum, S3MEGGIC; 8-way), constituted by the 420 S3 individuals developed from the inter...

During the last century, the progressive substitution of landraces with modern, high yielding varieties, led to a dramatic reduction of in situ conserved crop diversity in Europe. Nowadays there is limited and scattered information on where landraces are cultivated. To fill this gap and lay the groundwork for a regional landrace in situ conservatio...

Wild relatives of eggplant (Solanum melongena) are of interest for breeding for tolerance to drought. To assess the potential of eggplant wild relatives from different gene pools, 18 accessions belonging to eggplant and eight wild relatives were evaluated for water stress tolerance. Plants grown in pots were normally irrigated or subjected to water...

The wild species Solanum incanum has been used as a donor parent for the development of a set of eggplant introgression lines (ILs), which are of interest for breeding for stress tolerances and relevant morpho-agronomic traits but could also be useful for breeding for fruit quality, due to the generally higher content in health-promoting compounds...

Glucosinolates are sulfur compounds responsible at least in part of the the characteristic flavor of cruciferous vegetables and condiments. The glucosinolates [and their cognate bioactive forms, the isothiocyanates (ITCs) and indoles] have been studied for decades because of their antimicrobial, anticancer and antiinflammatory bioactivities Eating...

The development of organic farming in Europe is affected by different issues including the limited quantity and the poor quality of seeds available for the growers. The objectives of the workpackage 4 of the EU H2020 BRESOV project is to develop protocols and tools to maximize yield (T4.1) and ensure high sanitary quality (T4.2) and high genetic pu...

In horticulture, grafting is a popular technique used to combine positive traits from two different plants. This is achieved by joining the plant top part (scion) onto a rootstock which contains the stem and roots. Rootstocks can provide resistance to stress and increase plant production, but despite their wide use, the biological mechanisms drivin...

Tomato (Solanum lycopersicum) is the globally most consumed vegetable. The objective of this research was to analyze physico-chemical, nutritional and sensorial components (taste and flavor) in two new commercial hybrids (AS 300 F1 and AS 400 F1) and their four F7 parental lines. Two widely grown F1 hybrids (Precos F1 and Addalyn F1) were used as c...

A comprehensive collection of 1,254 tomato accessions corresponding to European heirlooms and landraces, together with modern varieties, early domesticates and wild relatives, were analyzed by genotyping by sequencing. A continuous genetic gradient between the vintage and modern varieties was observed. European vintage tomatoes displayed very low g...

Background Opportunity and challenges of the agriculture scenario of the next decades will face increasing demand for secure food through approaches able to minimize the input to cultivations. Large panels of tomato varieties represent a valuable resource of traits of interest under sustainable cultivation systems and for genome-wide association st...

The tree tomato (Solanum betaceum Cav.) is an underutilized fruit crop native to the Andean region and phylogenetically related to the tomato and potato. Tree tomato fruits have a high amount of nutrients and bioactive compounds. However, so far there are no studies at the genome or transcriptome level for this species. We performed a de novo assem...

Peppers (Capsicum spp.) and eggplants (Solanum spp.) are vegetable crops from the Solanaceae family that have spread worldwide and are important as a source of health-related compounds for humans. Several pepper and eggplant species have been domesticated, and a large number of wild relatives exist for both crops. Over 25,000 domesticated and wild...

Access to high-throughput next-generation sequencing is now becoming affordable also for non-model crops and small laboratories. In addition, for the most important economic crops, their wild relatives are being sequenced and exploited for the introgression of important traits and to unravel the crops domestication history. Despite the importance o...

MAGIC populations facilitate the genetic dissection of complex quantitative traits in plants and are valuable breeding materials. We report the development of the first eggplant MAGIC population (S3MEGGIC; 8-way), constituted by 420 S3 individuals developed from the intercrossing of seven cultivated eggplant (Solanum melongena) and one wild relativ...

Selection and breeding of eggplant (Solanum melongena) materials with good performance under low nitrogen (N) fertilization inputs is a major breeding objective to reduce environmental degradation, risks for human health, and production costs. Solanum elaeagnifolium, an eggplant wild relative, is a potential source of variation for introgression br...

Brinjal eggplant (Solanum melongena) is an annual vegetable cultivated for its edible fruits, which are variable in shape, size and color. Scarlet eggplant (S. aethiopicum) and gboma eggplant (S. macrocarpon) are also cultivated but more locally in Africa. Domestication of brinjal eggplant took place in India and China, but today the plant is culti...

Peppers (Capsicum spp.) are recalcitrant to in vitro culture regeneration, making the application of in vitro-based breeding strategies difficult. We evaluated the impact of different combinations of auxins, cytokinins and micronutrients on the induction of direct organogenesis in cotyledon and hypocotyl explants of C. annuum, C. baccatum and C. ch...

Significance This study provides a deep population genomic analysis of 10,000 Capsicum accessions held in genebanks and representing a frame of the global diversity of the genus. By combining single nucleotide polymorphisms (SNPs) based data and passport information, we investigated the genomic diversity and population structure of wild and domesti...

Antiviral treatments inhibiting Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) replication may represent a strategy complementary to vaccination to fight the ongoing Coronavirus disease 19 (COVID-19) pandemic. Molecules or extracts inhibiting the SARS-CoV-2 chymotripsin-like protease (3CLPro) could contribute to reducing or suppressin...

The purpose of this study was to evaluate the effects of different levels of water stress on seven pepino cultivars (Mur1-Mur7). Three water stress treatments were applied: fully irrigated control (C), a moderate water stress (WS-M), and a severe water stress (WS-S). We investigated the behavior of traits related to growth, photosynthetic pigments,...

The development of genetically transformed plants is an elusive landmark in Cannabis sativa L. breeding. Despite its economic interest, at present, protocols for producing transgenic C. sativa plants are scarce. We studied the ability of hypocotyl, cotyledon and meristem explants from six C. sativa hemp varieties for transgenic plant regeneration....

The pepino (Solanum muricatum) is a neglected crop from the Andean region with potential for expansion to many areas of the world. However, there is a lack of studies in pepino related to its response to water stress. In this study, we have subjected plantlets of seven pepino cultivars (Mur1-Mur7) to three treatments consisting of a fully irrigated...

The study of the diversity within and between major Solanaceae crops (pepper, tomato, eggplant) is of interest for the selection and development of balanced diets. We have measured thirty-six major fruit composition traits, encompassing sugars, organic acids, antioxidants and minerals, in a set of 10 accessions per crop for pepper, tomato and eggpl...

Eggplant (Solanum melongena) is a very important vegetable in many tropical and subtropical areas of the world. It is the third most produced Solanaceae in the world, but despite its importance, genetic resources and biotechnological tools for research have not been sufficiently developed. With the current climate change situation, many of the area...

Development of double haploids is an elusive current breeding objective in Cannabis sativa L. We have studied the whole process of anther and pollen grain formation during meiosis, microsporogenesis, and microgametogenesis and correlated the different microgametophyte developmental stages with bud length in plants from varieties USO31 and Finola. W...

The pepino (Solanum muricatum) is an Andean vegetable crop closely related to tomato. In the last decades, it has been introduced in the Mediterranean region and other parts of the world as a potential new crop. However, several tomato major pathogens may threaten the expansion of pepino cultivation. We identified Fusarium oxysporum f. sp. lycopers...

Eggplant (Solanum melongena L.) is an important horticultural crop and one of the most widely grown vegetables from the Solanaceae family. It was domesticated from a wild, prickly progenitor carrying small, round, non‐anthocyanic fruits. We obtained a novel, highly contiguous genome assembly of the eggplant ‘67/3’ reference line, by Hi‐C retrofitti...

Eggplant fruit shape is an important quantitative agronomic trait. The use of introgression lines (ILs) for QTLs identification is a powerful tool for the elucidation of the genetic control of eggplant fruit shape. In the present study, a set of 16 eggplant ILs, each harboring a single marker-defined chromosomal segment from the wild eggplant relat...

The ‘de penjar’ tomato (Solanum lycopersicum L.) is a group of local varieties from the Spanish Mediterranean region carrying the alc mutation, which provides long shelf-life. Their evolution under low-input management practices has led to the selection of resilient genotypes to adverse conditions. Here we present the first evaluation on nutritiona...

European horticulture, especially in the southern states, must exploit new qualities to increase the added value of its vegetables. This article aims to analyze the situation of the European geographical quality labels Protected Designation of Origin (PDO) and Protected Geographical Indication (PGI) to ascertain whether they are useful for this pur...

Improving the productivity of cucumber (Cucumis sativus L.) plants subjected to combined salinity and heat stresses is a significant challenge, particularly in arid and semi-arid regions. Gianco F1 cucumbers were grafted onto five cucurbit rootstocks and, together with an ungrafted control, were grown in Egypt in a net house with saline soil during...

Improving the productivity of cucumbers (Cucumis sativus L.) subjected to combined salinity and heat stresses is a significant challenge, particularly in arid and semi-arid regions. Gianco F1 cu-cumbers were grafted onto five cucurbit rootstocks and, together with an ungrafted control, were grown in Egypt in a net house with saline soil during the...

Citation: Boyaci H.F., Kabas A., Aysan Y., Prohens J. (2021): Screening of eggplant genotypes for resistance to bacterial wilt disease caused by Clavibacter michiganensis subsp. michiganensis. Plant Protect. Sci., 57: 112-121. Abstract: Clavibacter michiganensis subsp. michiganensis (Cmm) is one of the phytopathogenic bacteria causing bacterial wil...

The use of antimitotic agents such as colchicine has been common to obtain polyploid organisms. However, this approach entails certain problems, from its toxicity to the operators for being carcinogenic compounds to the instability of the individuals obtained, and the consequent reversion to its original ploidy because the individuals obtained in m...

Polyphenol oxidases (PPOs) catalyze the oxidization of polyphenols, which in turn causes the browning of the eggplant berry flesh after cutting. This has a negative impact on fruit quality for both industrial transformation and fresh consumption. Ten PPO genes (named SmelPPO1-10) were identified in eggplant thanks to the recent availability of a hi...

The wild Solanum pimpinellifolium (SP) and the weedy S. lycopersicum var. cerasiforme (SLC) are largely unexploited genetic reservoirs easily accessible to breeders, as they are fully cross-compatible with cultivated tomato (S. lycopersicum var. lycopersicum). We performed a comprehensive morphological and genomic characterization of four wild SP a...

Bacterial wilt caused by Ralstonia solanacerum is one of the most economically and destructive eggplant diseases in many tropical and subtropical areas of the world. The objectives of this study were to develop interspecific hybrids, as potential rootstocks, between the eggplant (Solanum melongena) bacterial wilt resistant line EG203 and four wild...

Whiteflies and spider mites are amongst the most harmful eggplant (Solanum melongena) pests. Considering the need for reduction of chemical applications for whitefly and spider mite control, the exploitation of wild relatives of eggplant as sources of pest resistances represents an important strategy in order to improve cultivated eggplant. The obj...