Itumeleng Moroenyane

Itumeleng Moroenyane
Stellenbosch University | SUN · Department of Botany and Zoology

Doctor of Philosophy

About

30
Publications
8,481
Reads
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465
Citations
Introduction
I am a plant scientist and PI of the Plant Holobiont Lab at Stellenbosch University, our current work focuses on understanding which assembly processes are delimiting the plant holobionts, as well as the evolutionary history of niche shifts and stability. This work will contribute to our understanding how plant holobionts are assembled and maintained, and more importantly, offer a new perspective on the hologenome theory of evolution.
Additional affiliations
August 2022 - April 2023
Donald Danforth Plant Science Center
Position
  • PostDoc Position
June 2016 - May 2021
National Institute of Scientific Research
Position
  • PhD Student
August 2013 - August 2015
Seoul National University
Position
  • Master's Student

Publications

Publications (30)
Article
Full-text available
The South African Fynbos is the smallest floristic kingdom with high levels of endemism and where fire dominates the landscape. However, drivers of soil microbial distribution and diversity are still poorly understood. This study aims to highlight the biogeographical patterns of bacterial and fungal communities and elucidate the mechanisms that med...
Article
Managed agricultural ecosystems are unique systems where crops and microbes are intrinsically linked. This study focuses on discerning microbiome successional patterns across all plant organs and tests for evidence of niche differentiation along temporal and spatial axes. Soybean plants were grown in an environmental chamber till seed maturation. S...
Article
Full-text available
Understanding the dynamics of plant-associated microbial communities within agriculture is well documented. However, the ecological processes that assemble the plant microbiome are not well understood. This study elucidates the relative dominance of assembly processes across plant compartments (root, stem, and leaves) and developmental stages (emer...
Article
Nematodes play an important role in ecosystems, yet very little is known about their assembly processes and the factors influencing them. We studied nematode communities in bulk soil from three Asian mountain ecosystems to study the assembly processes of free-living nematode metacommunities and their driving factors. On each mountain, elevations sp...
Article
Full-text available
To reveal the effect of the interactions between soil depth and different land use types on soil nutrients and soil bacterial communities in a karst area, fifty soil samples from five different karst land use types in Huajiang town, Guizhou province, Southwest China were collected, and the soil bacteria were analyzed using high-throughput absolute...
Article
Soil fungi play an important role in promoting nutrient cycling and maintaining ecosystem stability. Yet, there has been little understanding of how fungal co-occurrence networks differ along elevational climate gradients, a topic of interest to both macroecology and climate change studies. Based on high-throughput sequencing technology, we investi...
Article
Full-text available
Endophytic microbiome of healthy seeds forms a symbiotic relationship with their host. Seeds and environment are sources of microbes that colonise the developing plant, however, the influence of each remains unclear. Here, using irradiation combined with surface sterilisation to generate near-axenic seeds with disrupted and reduced microbiome, we c...
Preprint
Full-text available
Although many studies have explored patterns of fungal community diversity and composition along various environmental gradients, the trends of co-occurrence networks across similar gradients remain elusive. Here, we constructed co-occurrence networks for fungal community along a 2300 m elevation gradient on Mt Norikura, Japan, hypothesizing a prog...
Article
Full-text available
Microbial biogeographical patterns in Mediterranean ecosystems are becoming widely documented; however, the influences of slope aspect on the microbial community composition and structure are poorly understood. This study tested the hypotheses that slope aspect and organic matter content would influence microbial diversity patterns and distribution...
Article
Full-text available
Little is known of how fungal distribution ranges vary with elevation. We studied fungal diversity and community composition from 740 to 2940 m above sea level on Mt. Norikura, Japan, sequencing the ITS2 region. There was a clear trend, repeated across each of the fungal phyla (Basidiomycota, Ascomycota, Zygomycota, Chytridomycota and Glomeromycota...
Article
Climate change is predicted to have adverse impacts on terrestrial ecosystems and uncertainties exist on how these systems will respond. Terrestrial plant ecosystems can be divided by how they fix atmospheric carbon- C3, C4 and CAM photosynthesis pathways. However, as for now, no clear answers could be given regarding the future global repartition...
Article
Full-text available
There is considerable interest in the factors which may explain variation in microbial community assembly processes. In this study, we investigated bacterial community assembly, phylogenetic diversity and the relative role of deterministic and stochastic processes along environmental gradients on Mt. Norikura, Japan. DNA extracted from soil samples...
Chapter
Southeast Asia is well-known for its species-rich tropical rainforest, representing a "hotspot" of biodiversity. However, for the past several decades, the biodiversity of this region has been under severe threat due to rapid land use changes, including clearance of forests for agriculture. Soil microorganisms not only make up a large proportion of...
Article
The Israeli Mediterranean ecosystem has a distinctive flora with high levels of plant diversity. Previous studies of soil microbial ecology from the region have paid little attention to the possibility of distinctive soil bacterial communities associated with particular habitats. This study looked at bacterial communities present in the bulk soil f...
Article
Full-text available
Little is known about how nematode ecology differs across elevational gradients. We investigated the soil nematode community along a ~2,200 m elevational range on Mt. Norikura, Japan, by sequencing the 18S rRNA gene. As with many other groups of organisms, nematode diversity showed a high correlation with elevation, and a maximum in mid-elevations....
Article
Full-text available
Nematodes are among the most abundant metazoans in soils, but their true diversity and distribution patterns remain poorly investigated, especially in polar environments. Here, we studied three high Arctic tundra sites at Kongsford, NW Svalbard (78°55′N) to understand: (1) Whether there is detectable small-scale habitat variation, (2) What the pred...
Article
Full-text available
The Mediterranean Fynbos vegetation of South Africa is well known for its high levels of diversity, endemism, and the existence of very distinct plant communities on different soil types. Studies have documented the broad taxonomic classification and diversity patterns of soil microbial diversity, but none has focused on the community assembly proc...
Article
Full-text available
In many ecosystems, little is known of what influences the landscape-scale community structure of soil nematodes. We were interested in whether deterministic or stochastic factors dominate in terms of nematode community variation. We used a novel metagenetic approach to investigate variation in nematode community structure in the Fynbos vegetation...
Conference Paper
Full-text available
The Fynbos biome of South Africa is renowned for its high levels of plant diversity, endemism, and heterogeneous soils. Studies have elucidated the broad taxonomic classification and diversity patterns of soil nematodes in Fynbos. However, the majority of these studies have only looked at the diversity of plant-feeding nematode, and none have compa...
Article
Full-text available
Directional replacement and directional non-replacement models are two alternative paradigms for community development in primary successional environments. The first model emphasizes turnover in species between early and late successional niches. The second emphasizes accumulation of additional diversity over time. To test whether the development...
Article
The Mediterranean Fynbos vegetation of South Africa is well known for its high levels of diversity, endemism, and the existence of very distinct plant communities on different soil types. Studies have documented the broad taxonomic classification and diversity patterns of soil microbial diversity, but none has focused on the community assembly proc...

Questions

Question (1)
Question
I would like to extract total DNA for whole genome sequencing... 
Certain published protocol are unclear and yield low molecular weight DNA for sequencing.
Thanks in advance.
-Itu

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