Giulia Agostinetto

• BioData Scientist
• SLP Scientist at GlaxoSmithKline

Retrieval and visualization of biological data are essential for understanding complex systems. With the increasing volume of data generated from high-throughput sequencing technologies, effective and optimized data visualization tools have become indispensable. This is particularly relevant in the COVID-19 postpandemic period, where understanding...

Microbiome research advancements have provided countless insights. Despite the massive amount of data currently stored in public repositories, these resources remain vastly underutilized due to the intricacy of data and metadata retrieval from these databases. However, leveraging data-driven approaches is crucial for microbiome research progress by...

Background Sustainable aquaculture relies on multiple factors, including water quality, fish diets, and farmed fish. Replacing fishmeal (FM) with alternative protein sources is key for improving sustainability in aquaculture and promoting fish health. Indeed, great research efforts have been made to evaluate novel feed formulations, focusing especi...

OBJECTIVE To retrospectively compare efficacy of a continuous positive airway pressure (CPAP) helmet against standard oxygen supplementation (STD) administered by nasal cannulae in dogs with acute cardiogenic pulmonary edema (ACPE). ANIMALS 83 dogs (STD group, n = 41; CPAP group, 42) hospitalized for ACPE (January 2019 to April 2021). METHODS Mea...

Individual and species traits may determine the functional relationships between predators and their prey, with clear consequences for the ecosystem services potentially associated with predation. Bats are well-known potential deliverers of ecosystem services in agroecosystems through predation of pest arthropods that may affect crop production. He...

Forest ecosystems are fundamental to the conservation of global biodiversity and human wellbeing, hosting high numbers of species worldwide, and providing essential regulatory, provisioning, and cultural ecosystem services. The increasing impact of drivers of environmental changes such as climate change and biological invasions endangers forests, o...

Microbial communities interact with us and affect our health in ways that are only beginning to be understood. Microorganisms have been detected in every ecosystem on Earth, as well as in any built environment that has been investigated. Drinking water sources, drinking water treatment plants and distribution systems provide peculiar microbial ecol...

Habitat fragmentation affects biodiversity, but with unclear effects on pollinators and their interactions with plants in anthropized landscapes. Islands could serve as open air laboratories, suitable to disentangle how land‐use alteration impacts pollination ecology. In Maldive islands we investigated how pollinator richness, plant‐pollinator inte...

Large amounts of data from microbiome-related studies have been (and are currently being) deposited on international public databases. These datasets represent a valuable resource for the microbiome research community and could serve future researchers interested in integrating multiple datasets into powerful meta-analyses. However, this huge amoun...

As human activities on our planet persist, causing widespread and irreversible environmental degradation, the need to biomonitor ecosystems has never been more pressing. These circumstances have required a renewal in monitoring techniques, encouraged by necessity to develop more rapid and accurate tools which will support timely observations of eco...

Background The increasing availability of multi-omics data is leading to regularly revised estimates of existing biodiversity data. In particular, the molecular data enable novel species to be characterized and the information linked to those already observed to be increased with new genomics data. For this reason, the management and visualization...

Boosted by the exponential growth of microbiome-based studies, analyzing microbiome patterns is now a hot-topic, finding different fields of application. In particular, the use of machine learning techniques is increasing in microbiome studies, providing deep insights into microbial community composition. In this context, in order to investigate mi...

As human activities on our planet persist, causing widespread and irreversible environmental degradation, the need to biomonitor ecosystems has never been more pressing. These circumstances have required a renewal in monitoring techniques, encouraged by necessity to develop more rapid and accurate tools which will support timely observations of eco...

Habitat fragmentation is known to affect biodiversity, but the impact on pollinators and their interactions with plants is still unclear in anthropized landscapes. Islands are open-air laboratories for ecological studies with simplified communities and interactions, suitable to disentangle how land-use alteration impacts pollination ecology and its...

Here, we present the SKIOME Project, which has the ambitious aims of disentangling intricate human skin microbiome patterns, defining the impact of host-microbial interactions, and reconstructing the functional properties that drive the microbiome. The novelty of this project is the adoption of an interdisciplinary approach through the integration...

Medicinal plants have been widely used in traditional medicine due to their therapeutic properties. Although they are mostly used as herbal infusion and tincture, employment as ingredients of food supplements is increasing. However, fraud and adulteration are widespread issues. In our study, we aimed at evaluating DNA metabarcoding as a tool to ide...

Sub-Saharan African crop production largely relies on smallholder farms, located both in urban and agricultural landscapes. In this context, the investigation of plant and pollinator diversity and their interactions is of primary importance since both these factors are threatened by land use intensification and the consequent loss of natural habita...

Large amounts of data from microbiome-related studies have been (and are currently being) deposited on international public databases. These datasets represent a valuable resource for the microbiome research community and could serve future researchers interested in integrating multiple datasets into powerful meta-analyses. However, this huge amoun...

The aim of the present study was to compare sedation quality and cardiorespiratory parameters in healthy dogs after intramuscular injection of dexmedetomidine and ketamine with or without methadone. Forty client-owned dogs were randomly divided into two groups and received IM dexmedetomidine (5 µg kg⁻¹) and ketamine (1 mg kg⁻¹), associated (DKM gro...

Omics tools offer the opportunity to characterize and trace traditional and industrial fermented foods. Bioinformatics, through machine learning, and other advanced statistical approaches, are able to disentangle fermentation processes and to predict the evolution and metabolic outcomes of a food microbial ecosystem. By assembling microbial artific...

Background The increasing availability of multi omics data is leading to continually revise estimates of existing biodiversity data. In particular, the molecular data enable to characterize novel species yet unknown and to increase the information linked to those already observed with new genomic data. For this reason, the management and visualizat...

Traceability, quality and safety of edible insects are important both for the producers and the consumers. Today, alongside the burst of edible insects in western countries, we are facing a gap of knowledge of insect microbiota associated with the microbial ecosystems of insect-based products. In this context, High-Throughput DNA Sequencing (HTS) t...

Traceability, quality and safety of edible insects are important both for the producers and the consumers. Today, alongside the burst of edible insects in western countries, we are facing a gap of knowledge of insect microbiota associated with the microbial ecosystems of insect-based products. Recent studies suggest that the insect microbiota can v...

Please cite this article as: Frigerio, J., Agostinetto, G., Sandionigi, A., Mezzasalma, V., Maria Berterame, N., Casiraghi, M., Labra, M., Galimberti, A., The hidden 'plant side' of insect novel foods: a DNA-based assessment, Food Research International (2019), doi: https://doi. Abstract In the context of novel foods, a category for which the marke...

One of the main goals of the quality control evaluation is to identify contaminants in raw material, or contamination after a food is processed and before it is placed on the market. During the treatment processes, contamination, both accidental and economically motivated, can generate incongruence between declared and real composition. In our stud...