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Introduction
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September 2020 - present
October 1997 - January 2000
March 1993 - October 1996
Publications
Publications (321)
Species introductions promote secondary contacts between taxa with long histories of allopatric divergence. Anthropogenic contact zones thus offer valuable contrasts to speciation studies in natural systems where past spatial isolations may have been brief or intermittent. Investigations of anthropogenic hybridization are rare for marine animals, w...
High-throughput sequencing (HTS) technologies offer new promise to support surveillance programs targeting marine non-indigenous species (NIS). Metabarcoding might surpass traditional monitoring methods, for example through its ability to detect rare species, a key feature in early detection of NIS. Another interest of this approach is the identifi...
Biological invasions are occurring at increasing rates since the onset of the twentieth century. While ports and marinas have been identified as a major point-of-entry for the spread of marine non-indigenous species (NIS), their relationships with wild habitats however needs further scrutiny. We had the rare opportunity to monitor the real-time col...
Aim: Biological invasions and changes in land and sea use are among the five major causes of global biodiversity decline. Shipping and ocean sprawl (multiplication of artificial structures at the expense of natural habitats) are considered as the major forces responsible for marine invasions and biotic homogenization. And yet, there is little evide...
Molecular tools have been extensively used in recent decades to examine biological invasion processes, and are increasingly being adopted as efficient tools to support non-indigenous species surveys, notably through barcoding approaches, i.e., the use of a reference sequence specific to a given species to validate its identification. The technique...
Molecular methods such as DNA/eDNA metabarcoding have emerged as useful tools to document biodiversity of complex communities over large spatio-temporal scales. We established an international Marine Biodiversity Observation Network (ARMS-MBON) combining standardised sampling using autonomous reef monitoring structures (ARMS) with metabarcoding for...
Redistribution of biodiversity represents a key challenge for understanding scales of spatial variation in natural marine communities. With increasing coastal urbanization, artificial structures are proliferating, with impacts on natural habitats, yet we have limited knowledge on the spatial scales of processes operating over their associated speci...
The Working Group on Ballast and Other Ship Vectors under the International Council for the Exploration of the Sea, Intergovernmental Oceanographic Commission of UNESCO, and Inter-national Maritime Organization (ICES/IOC/IMO WGBOSV) aims to provide scientific support to international decision-making to reduce the risk of spread and establishment of...
Marinas have a major ecological footprint, not only because of the pollution they generate but also because of the introduction and spread of non-indigenous species (NIS). This invites us to reconsider both the practices and in-frastructures of marinas but also their uses and users, as marinas are increasingly recognized as places of well-being. Th...
Since 2011, massive new strandings of holopelagic Sargassum have been reported on the coasts of the Caribbean, northern Brazil, Guiana, and West Africa, causing severe economic and ecological damage. Three common morphotypes (S. fluitans III, S. natans I, and S. natans VIII) were identified as responsible for these catastrophic events, with dominan...
Human transport of species across oceans disrupts natural dispersal barriers and facilitates hybridization between previously allopatric species. The recent introduction of the North Pacific sea squirt, Ciona robusta, into the native range of the North Atlantic sea squirt, Ciona intestinalis, is a good example of this outcome. Recent studies have r...
Effective monitoring of non-indigenous seaweeds and combatting their effects relies on a solid confirmation of the non-indigenous status of the respective species. We critically analysed the status of presumed non-indigenous seaweed species reported from the Mediterranean Sea, the Northeast Atlantic Ocean and Macaronesia, resulting in a list of 140...
Eco‐evolutionary dynamics, or eco‐evolution for short, are often thought to involve rapid demography (ecology) and equally rapid heritable phenotypic changes (evolution) leading to novel, emergent system behaviours. We argue that this focus on contemporary dynamics is too narrow: Eco‐evolution should be extended, first, beyond pure demography to in...
To understand global shifting trends in marine biodiversity it is essential to apply cost-efficient biomonitoring approaches in a coordinated and standardized manner, to generate comparable data across geographical regions and countries. In this context, DNA metabarcoding is particularly useful to document biodiversity over larger spatiotemporal sc...
Current efforts to halt the decline of biodiversity are based primarily on protecting species richness. This narrow focus overlooks key components of biological diversity, particularly the infra-species genetic diversity, which is critical to consider with respect to genetic adaptation in changing environments. While comparative population genetics...
Human transport of species across oceans disrupts natural dispersal barriers and facilitates hybridisation between previously allopatric species. The recent introduction of the North Pacific sea squirt, Ciona robusta , into the native range of the North Atlantic sea squirt, C. intestinalis , is a good example of this outcome. Recent studies have re...
Aim: Trait-based approaches are powerful to examine the processes associated with biological invasions. Functional comparison among native and non-indigenous species (NIS) can notably infer whether novel assemblages result from neutral or niche-based assembly rules. Applying such a framework to biofouling communities, our study aimed to elucidate t...
Molecular techniques using DNA retrieved from community or environmental samples, in particular environmental DNA (eDNA), are becoming increasingly popular for detecting individual species, assessing biodiversity, and quantifying ecological indices. More recently, eDNA has also been proposed as a template for population genetics, and several studie...
Background Ocean-related options (OROs) to mitigate and adapt to climate change are receiving increasing attention from practitioners, decision-makers, and researchers. In order to guide future ORO development and implementation, a catalogue of scientific evidence addressing outcomes related to different ORO types is critical. However, until now, s...
Effective monitoring and combatting the effect of non-indigenous seaweeds relies on a solid confirmation of the non-indigenous status of the species. We critically analysed the status of presumed non-indigenous seaweed species reported from the Mediterranean Sea, the Northeast Atlantic Ocean and Macaronesia, resulting in a list of 140 species whose...
Non-indigenous species (NIS) continue to arrive in high numbers to OSPAR Regions, with potential negative effects on ecosystems. The rate of introduction, mostly crustaceans and macroalgae, is slightly decreasing in Greater North Sea (Region II), Celtic Seas (Region III), and Bay of Biscay and Iberian Coast (Region IV), although
lag time in report...
Efficient biodiversity monitoring programs are essential to assess the ecological status of marine ecosystems. In the context of the European Marine Strategy Framework Directive (MFSD), coastal rocky reef fish assemblages are most often surveyed using underwater visual census (UVC). While UVC is well-suited to monitor conspicuous fish, it underesti...
Current efforts to halt the decline of biodiversity decline are based primarily on protecting species richness. This narrow focus overlooks key components of biological diversity, particularly the infra-species genetic diversity, which is critical to consider with respect to genetic adaptation in changing environments. While comparative population...
With the advent of the Anthropocene, biological invasions have reached an unprecedented level, and the number of species introductions is still increasing in an ever-changing world. Despite major advances in invasion science, significant debate and lack of clarity remain surrounding the determinants of success of introduced species, the magnitude a...
Biological invasions are one of the main global threats to biodiversity in terrestrial, freshwater and marine ecosystems worldwide, requiring effective inventorying and monitoring programs. Here, we present an updated list of non-indigenous species in French marine and transitional waters. Focused on eukaryote pluricellular species found throughout...
Invasive alien species are a major worldwide driver of biodiversity change. The current study lists verified records of non-indigenous species (NIS) in European marine waters until 2020, with the purpose of establishing a baseline, assessing trends, and discussing appropriate threshold values for good environmental status (GES) according to the rel...
Eco-evolutionary dynamics, or eco-evolution for short, are thought to involve rapid demography (ecology) and equally rapid phenotypic changes (evolution) leading to novel, emergent system behaviours. This focus on contemporary dynamics is likely due to accumulating evidence for rapid evolution, from classical laboratory microcosms and natural popul...
The goal of the ICES Working Group on the Introduction and Transfers of Marine Organisms (WGITMO) is to contribute to the ICES vision and mission by addressing specific science objectives related to the introduction, spread and impacts of non-indigenous marine species (NIS). The expert working group provides information and advice on the impacts of...
Human-mediated introductions are reshuffling species distribution on a global scale. Consequently, an increasing number of allopatric taxa are now brought into contact, promoting introgressive hybridization between incompletely isolated species and new adaptive gene transfer. The broadcast spawning marine species, Ciona robusta, has been recently i...
Humans have built ports on all the coasts of the world, allowing people to travel, exploit the sea, and develop trade. The proliferation of these artificial habitats and the associated maritime traffic are not predicted to fade in the coming decades. Ports share common characteristics: species find themselves in novel singular environments, with pa...
Marinas are high-priority targets for marine non-indigenous species (NIS), where they compose a large portion of the biofouling communities. The practicality of water samples collection makes environmental DNA (eDNA) metabarcoding an interesting tool for routine NIS surveys. Here the effectiveness of water-eDNA-metabarcoding to identify biofouling...
Human-mediated introductions are reshuffling species distribution on a global scale. Consequently, an increasing number of allopatric taxa are now brought into contact, promoting introgressive hybridization between incompletely isolated species and new adaptive gene transfer. The broadcast spawning marine species, Ciona robusta , has been recently...
Faced with sea level rise and the intensification of extreme events, human populations living on the coasts are developing responses to address local situations. A synthesis of the literature on responses to coastal adaptation allows us to highlight different adaptation strategies. Here, we analyze these strategies according to the complexity of th...
Among anthropogenic habitats built in the marine environment, floating and non-floating structures can be colonized by distinct assemblages. However, there is little knowledge whether these differences are also reflected in the functional structure. This study compared the functional diversity of sessile and mobile invertebrate assemblages that set...
The International Convention for the Control and Management of Ships' Ballast Water and Sediments (BWM Convention) aims to mitigate the introduction risk of harmful aquatic organisms and pathogens (HAOP) via ships’ ballast water and sediments. The BWM Convention has set regulations for ships to utilise exceptions and exemptions from ballast water m...
Human‐driven translocations of species have diverse evolutionary consequences such as promoting hybridization between previously geographically isolated taxa. This is well‐illustrated by the solitary tunicate, Ciona robusta, native to the North East Pacific and introduced in the North East Atlantic. It is now co‐occurring with its congener C. intes...
Human-driven translocations of species have diverse evolutionary consequences such as promoting hybridization between previously geographically isolated taxa. This is well-illustrated by the solitary tunicate, Ciona robusta , native to the North East Pacific and introduced in the North East Atlantic. It is now co-occurring with its congener C. inte...
The coastal oceans can be highly variable, especially near ocean fronts. The Ushant Front is the dominant oceanographic feature in the Iroise Sea (NE Atlantic) during summer, separating warm stratified offshore waters from cool vertically-mixed nearshore waters. Mesozooplankton community structure was investigated over an annual cycle to examine re...
This protocol describes a double digested restriction-site associated DNA (ddRADseq) procedure, that is a variation on the original RAD sequencing method (Davey & Blaxter 2011), which is used for de novo SNP discovery and genotyping. This protocol differs from the original ddRADseq protocol (Peterson et al 2012), in which the samples are pooled jus...
Species distributions have been profoundly affected by past climate change, and are expected to change considerably in response to future environmental change. To better apprehend how future climate change is likely to affect genetic diversity in marine populations, it is essential to first evaluate the processes that have shaped the current distri...
• High‐throughput sequencing of amplicons (HTSA) has been proposed as an effective approach to evaluate taxonomic and genetic diversity at the same time. However, there are still uncertainties as to how the results produced by different bioinformatics treatments impact the conclusions drawn on biodiversity and population genetics indices.
• We eval...
Human activity is an important driver of ecological and evolutionary change on our planet. In particular, domestication and biological introductions have important and long-lasting effects on species’ genomic architecture and diversity. However, genome-wide analysis of independent domestication and introduction events within a single species has no...
Examining the effects of disturbances within marine urban communities can shed light on their assembly rules and invasion processes. The effects of physical disturbance, through the removal of dominant native habitat-builders, were investigated in the recolonization of disturbed patches and colonization of plates on pier pilings, in a Chilean port....
Marine hard-bottom communities are undergoing severe change under the influence of multiple drivers, notably climate change, extraction of natural resources, pollution and eutrophication, habitat degradation, and invasive species. Monitoring marine biodiversity in such habitats is, however, challenging as it typically involves expensive, non-standa...
Marine hard-bottom communities are undergoing severe change under the influenceof multiple drivers, notably climate change, extraction ofnatural resources, pollutionand eutrophication, habitat degradation, and invasive species. Monitoring marinebiodiversity in such habitats is, however, challenging as it typically involves expensive,non-standardize...
Marine hard-bottom communities are undergoing severe change under the influence of multiple drivers, notably climate change, extraction of natural resources, pollution and eutrophication, habitat degradation, and invasive species. Monitoring marine biodiversity in such habitats is, however, challenging as it typically involves expensive, non-standa...
A strongly divergent lineage, putatively a new cryptic species, of colonial ascidian was first detected as an anomalous sample in a population genomics study of the well-known worldwide invasive species Didemnum vexillum Kott, 2002. This putative new taxon, found in a marina in Roscoff, France, is indistinguishable from Didemnum vexillum in the ext...
Species introductions promote secondary contacts between taxa with long histories of allopatric divergence. Anthropogenic contact zones thus offer valuable contrasts to speciation studies in natural systems where past spatial isolations may have been brief or intermittent. Investigations of anthropogenic hybridization are rare for marine animals, w...
The genus Ciona is an interesting 'taxonomic case' because its evolutionary history and taxonomy have not yet been resolved completely. In this study, we present new findings, describing specimens of an unidentified Ciona species collected along the northeastern coasts of Sardinia (Tyrrhenian Sea, Mediterranean Sea). Applying an integrative taxonom...
The genus Ciona is an interesting ‘taxonomic case’ because its evolutionary history and taxonomy have not yet been resolved completely. In this study, we present new findings, describing specimens of an unidentified Ciona species collected along the north-eastern coasts of Sardinia (Tyrrhenian Sea, Mediterranean Sea). Applying an integrative taxono...
Of the suite of species interactions involved in biotic resistance to species invasions, predation can have complex outcomes according to the theoretical and empirical framework of community ecology. In this study, we aimed to determine the likelihood of consumptive biotic resistance within fouling communities in four ports of central Chile. Notabl...
Human‐mediated transport creates secondary contacts between genetically differentiated lineages, bringing new opportunities for gene exchange. When similar introductions occur in different places, they provide informally replicated experiments for studying hybridisation. We here examined 4279 Mytilus mussels, sampled in Europe and genotyped with 77...
Human-mediated transport creates secondary contacts between genetically differentiated lineages, bringing new opportunities for gene exchange. When similar introductions occur in different places, they provide informally replicated experiments for studying hybridisation. We here examined 4279 Mytilus mussels, sampled in Europe and genotyped with 77...
Biological invasions have reached an unprecedented level and the number of introduced species is still increasing worldwide. Despite major advances in invasion science, the determinants of success of introduced species, the magnitude and dimensions of their impact, and the mechanisms sustaining successful invasions are still debated. Empirical stud...
Biological invasions have reached an unprecedented level and the number of introduced species is still increasing worldwide. Despite major advances in invasion science, the determinants of success of introduced species, the magnitude and dimensions of their impact, and the mechanisms sustaining successful invasions are still debated. Empirical stud...
The Working Group on the Introductions and Transfers of Marine Organisms (WGITMO) has contributed several major achievements to the ICES vision, including the first ICES Viewpoint on Biofouling and its source document, two Cooperative Research Reports, and numerous pub-lications related to ToRs, and the continued population of the AquaNIS database....