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Felix Scholkmann

Felix Scholkmann
University of Zurich & University of Bern

PD Dr. sc. nat.

About

248
Publications
89,306
Reads
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7,588
Citations
Introduction
Felix Scholkmann received his PhD at the University of Zurich, Switzerland, in 2014. A postdoc and research associate at the Biomedical Optics Research Laboratory of the University Hospital Zurich, his research focuses on biomedical signal processing, biomedical optics (development and application of functional near-infrared spectroscopy (fNIRS) for human optical neuroimaging), neuroscience, integrative physiology and biophysics.
Additional affiliations
January 2010 - present
University Hospital Zurich and University of Zurich
Position
  • Researcher
January 2007 - October 2017
University of Zurich
Position
  • Researcher
Education
February 2020 - May 2021
University of Zurich
Field of study
  • Habilitation
September 2009 - October 2014
University of Zurich
Field of study
  • Computational Science, Biomedical Optics
September 2008 - July 2022
University of Zurich
Field of study
  • Computational science, bioinformatics, neuroscience

Publications

Publications (248)
Article
Full-text available
We highlight a significant problem that needs to be considered and addressed when performing functional near-infrared spectroscopy (fNIRS) studies, namely the possibility of inadvertently measuring fNIRS hemodynamic responses that are not due to neurovascular coupling. These can be misinterpreted as brain activity, i.e., "false positives" (errors c...
Article
Full-text available
In this Outlook paper, we explain why an accurate physiological interpretation of functional near-infrared spectroscopy (fNIRS) neuroimaging signals is facilitated when systemic physiological activity (e.g., cardiorespiratory and autonomic activity) is measured simultaneously by employing systemic physiology augmented functional near-infrared spect...
Chapter
A critically important step for the uptake and transport of oxygen (O2) in living organisms is the crossing of the phase boundary between gas (or water) and lipid/proteins in the cell. Classically, this transport across the phase boundary is explained as a transport by proteins or protein-based structures. In our contribution here, we want to show...
Chapter
Background: All parameters of human physiology show chronobiological variability. While circadian (cycle length ~ 24 h) rhythms of the neuronal, hemodynamic and metabolic aspects of human brain activity are increasingly being explored, infradian (cycle length > 24 h) rhythms are largely unexplored. Aim: We investigated if cerebrovascular oxygen sat...
Chapter
Individuals have different performance levels for cognitive tasks. Are these performance levels reflected in physiological parameters? The aim of this study was to address this question by systemic physiology augmented functional near-infrared spectroscopy (SPA-fNIRS). We aimed to investigate whether different verbal fluency task (VFT) performances...
Article
Studying brain functions and activity during gamma oscillations can be a challenge because it requires careful planning to create the necessary conditions for a controlled experiment. Such an experiment consists of placing the brain into a gamma state and investigating cognitive processing with a careful design. Cortical oscillations in the gamma f...
Article
Full-text available
Cardiac physiological synchrony is regarded as an important component of social interaction due to its putative role in prosocial behaviour. Yet, the processes underlying physiological synchrony remain unclear. We aim to investigate these processes. 20 dyads (19 men, 21 women, age range 18–35) engaged in a self-paced interpersonal tapping synchroni...
Article
Full-text available
Quantifying neural activity in natural conditions (i.e. conditions comparable to the standard clinical patient experience) during the administration of psychedelics may further our scientific understanding of the effects and mechanisms of action. This data may facilitate the discovery of novel biomarkers enabling more personalized treatments and im...
Article
Full-text available
Worldwide there have been over 760 million confirmed coronavirus disease 2019 (COVID-19) cases, and over 13 billion COVID-19 vaccine doses have been administered as of April 2023, according to the World Health Organization. An infection with severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) can lead to an acute disease, i.e. COVID-19, bu...
Article
Full-text available
The use of serotonergic psychedelics has gained increasing attention in research, clinical practice and society. Growing evidence suggests fast-acting, transdiagnostic health benefits of these 5-hydroxytryptamine 2A receptor agonists. Here, we provide a brief overview of their benefits for psychological, cardiovascular, metabolic, neurodegenerative...
Article
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(1) Background: Mild hyperthermia (mHT, 39–42 °C) is a potent cancer treatment modality when delivered in conjunction with radiotherapy. mHT triggers a series of therapeutically relevant biological mechanisms, e.g., it can act as a radiosensitizer by improving tumor oxygenation, the latter generally believed to be the commensurate result of increas...
Preprint
Full-text available
Quantifying neural activity in natural conditions (i.e. conditions comparable to the standard clinical patient experience) during the administration of psychedelics may further our scientific understanding of the effects and mechanisms of action. This data may facilitate the discovery of novel biomarkers enabling more personalized treatments and im...
Article
Quantifying neural activity in natural conditions (i.e. conditions comparable to the standard clinical patient experience) during the administration of psychedelics may further our scientific understanding of the effects and mechanisms of action. This data may facilitate the discovery of novel biomarkers enabling more personalized treatments and im...
Chapter
Background: Eye contact is an important aspect of human communication and social interactions. Changes in brain and systemic physiological activity associated with interactions between humans can be measured with systemic physiology augmented functional near-infrared spectroscopy (SPA-fNIRS) hyperscanning, enabling inter-brain and inter-body synch...
Chapter
Full-text available
Background: Although several studies published reference values for frontal cerebral tissue oxygen saturation (StO2) measured with near-infrared spectroscopy (NIRS) based cerebral oximetry, a detailed investigation, whether and which factors from systemic physiology are related to the individual StO2 values, is missing. Aim: We investigated how...
Chapter
Background: Understanding the brain and body processes during interaction or cooperation between two or more subjects is an important topic in current neuroscientific research. In a previous study, we introduced a novel approach that enables investigation of the coupling of biosignals (brain and systemic physiology, SP) from two subjects: systemic...
Article
Full-text available
Background: Sex differences in behavioural performance of a cognitive task have been repeatedly reported in the literature. Whether such differences are also relevant for evoked cerebral haemodynamic and oxygenation responses as well as systemic physiological changes is a topic of ongoing investigations. Aim: We investigated whether changes in c...
Article
Full-text available
In this Outlook paper, we explain to the optical neuroimaging community as well as the psychedelic research community the great potential of using optical neuroimaging with functional near-infrared spectroscopy (fNIRS) to further explore the changes in brain activity induced by psychedelics. We explain why we believe now is the time to exploit the...
Article
Full-text available
Unwanted substances can be effectively removed from the blood using double-filtration plasmapheresis (DFPP). In our case study, we used field emission scanning electron microscopy/energy-dispersive X-ray analysis (FE-SEM-EDX) to examine if the eluate obtained by a specific type of DFPP (INUSpheresis with a TKM58 filter) contains nano- and micropart...
Article
Full-text available
Bioelectricity plays an essential role in the structural and functional organization of biological organisms. In this first part of our multi-part series of articles, we summarise the importance of bioelectricity for the basic structural level of biological organization, i.e. from the subcellular level (charges, ion channels, molecules and cell org...
Article
Full-text available
There is large intersubject variability in cerebrovascular hemodynamic and systemic physiological responses induced by a verbal fluency task (VFT) under colored light exposure (CLE). We hypothesized that machine learning would enable us to classify the response patterns and provide new insights into the common response patterns between subjects. In...
Article
Full-text available
Introduction: In the context of the COVID-19 pandemic, many governments mandated the wearing of face masks by law. New research shows that these masks contain and release microplastics. Methods: In the present work, five samples of surgical masks were examined microscopically for the presence of particles and fragments. The masks were purchased fr...
Preprint
Full-text available
Cardiac physiological synchrony between two persons is considered to be an important component of social interaction. Yet, the processes underlying physiological synchrony remain unclear. We aim to investigate these processes. 20 dyads (19 men, 21 women, age: mean 23.7, range: 18–35) engaged in a self-paced interpersonal tapping synchronization tas...
Preprint
Full-text available
Cardiac physiological synchrony between two persons is considered to be an important component of social interaction. Yet, the processes underlying physiological synchrony remain unclear. We aim to investigate these processes. 20 dyads (19 men, 21 women, age: mean 23.7, range: 18–35) engaged in a self-paced interpersonal tapping synchronization tas...
Article
Full-text available
This report is the second part of a comprehensive two-part series aimed at reviewing an extensive and diverse toolkit of novel methods to explore brain health and function. While the first report focused on neurophotonic tools mostly applicable to animal studies, here, we highlight optical spectroscopy and imaging methods relevant to noninvasive hu...
Article
Full-text available
Double-filtration plasmapheresis (DFPP) is a blood cleaning technique that enables the removal of unwanted substances from the blood. In our case study, we performed near-infrared (NIR) spectroscopy measurements on the human hand tissue before and after a specific DFPP treatment (INUSpheresis with a TKM58 filter), along with NIR measurements of the...
Article
Full-text available
The aim of our study was (I) To compare back muscle oxygenation and perfusion as well as Biering–Sorensen muscle endurance (BSME) test holding times between chronic non-specific low back pain (CNSLBP) patients and asymptomatic controls matched for age, body mass index (BMI), sex and physical activity, and (II) to investigate factors associated with...
Article
Full-text available
In our previous investigations using systemic physiology augmented functional near-infrared spectroscopy (SPA-fNIRS) neuroimaging, we found larger variability between subjects in changes of cerebral hemodynamics and oxygenation induced by an intricate experimental paradigm involving colored light exposure and a cognitive task. We aimed to investiga...
Article
Full-text available
Significance Functional near-infrared spectroscopy (fNIRS) enables measuring the brain activity of two subjects while they interact, i.e., the hyperscanning approach. Aim In our exploratory study, we extended classical fNIRS hyperscanning by adding systemic physiological measures to obtain systemic physiology augmented fNIRS (SPA-fNIRS) hyperscann...
Article
Full-text available
Significance Functional near-infrared spectroscopy (fNIRS) enables the measurement of brain activity noninvasively. Optical neuroimaging with fNIRS has been shown to be reproducible on the group level and hence is an excellent research tool, but the reproducibility on the single-subject level is still insufficient, challenging the use for clinical...
Article
Full-text available
The coronavirus disease 2019 (COVID-19) pandemic, caused by the transmission of the severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2), shows a complex epidemiological course characterized by several successive waves of infection with a certain strength, duration, and rhythm. Recently, Mitchell and Zhang reported in a publication in this...
Chapter
Background: Sex differences in behavioural performance of a cognitive task have been repeatedly reported in the literature. Whether such differences are also relevant for evoked cerebral haemodynamic and oxygenation responses as well as systemic physiological changes is a topic of ongoing investigations. Aim: We investigated whether changes in cere...
Article
Full-text available
There is a surprisingly high morphological similarity between multilamellar concentric thylakoids in cyanobacteria and the myelin sheath that wraps the nerve axons. Thylakoids are multilamellar structures, which express photosystems I and II, cytochromes and ATP synthase necessary for the light-dependent reaction of photosynthesis. Myelin is a mult...
Conference Paper
Full-text available
We present a study investigating the effect of non-medical face masks (FFP2 and surgical) on cerebral hemodynamics measured by transcranial hybrid diffuse optics, and on systemic physiology in 13 healthy adults (age: 23-33 years).
Article
Full-text available
In a study by Law and colleagues recently published in Neuroimage, the authors reported that wearing a surgical mask during an fMRI scan leads to a statistically significant subject-specific change (30%) in the baseline BOLD level in gray matter, although the response to a sensory-motor task was unaffected. An average increase in end-tidal CO2 of 7...
Article
Full-text available
The COVID-19 pandemic led to widespread mandates requiring the wearing of face masks, which led to debates on their benefits and possible adverse effects. To that end, the physiological effects at the systemic and at the brain level are of interest. We have investigated the effect of commonly available face masks (FFP2 and surgical) on cerebral hem...
Article
We provide a brief review about the significance of hypnosis with respect to applications and physiological processes in hypnotherapy. Our review concludes that hypnosis is a promising method to manage acute and chronic pain. In addition, we discuss indications pointing toward the view that hypnosis can induce changes in neuroplasticity possibly in...
Article
Full-text available
Background: Findings from autopsies have provided evidence on systemic microvascular damage as one of the underlying mechanisms of Coronavirus disease 2019 (CO-VID-19). The aim of this study was to correlate autopsy-based cause of death in SARS-CoV-2, severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) positive patients with chest imaging...
Article
Full-text available
We provide a brief review about the significance of platelets, mitochondria, vitamin D, serotonin and the gutmicrobiome in COVID-19. We hypothesize that hyperactive platelets and mitochondrial dysfunction as well as low vitamin D level, gut dysbiosis and increased serum serotonin produced by enterochromaffin cells may all represent important aspect...
Article
Full-text available
Background: While meaningful sound exposure has been shown to be important for newborn development, an excess of noise can delay the proper development of the auditory cortex. Aim: The aim of this study was to assess the acoustic environment of a preterm baby in an incubator on a newborn intensive care unit (NICU). Methods: An empty but runnin...
Article
Full-text available
Analyses of neutrino measurements acquired by the Super-Kamiokande Neutrino Observatory (SK, in operation 1996–2001) and radon decay measurements acquired by the Geological Survey of Israel (GSI, in operation 2007–2017) yield strikingly similar detections of an oscillation with frequency 9.43 ± 0.04 year−1 (SK), 9.44 ± 0.04 year−1 (GSI); amplitude...
Article
Full-text available
We provide a brief review of the significance of platelets, mitochondria, vitamin D, serotonin and the gutmicrobiome in COVID-19. We hypothesize that hyperactive platelets and mitochondrial dysfunction, as well as low vitamin D level, gut dysbiosis and increased serum serotonin produced by enterochromaffin cells, may all represent important aspects...
Chapter
Full-text available
Background: In modern society, we are increasingly exposed to numerous sources of blue light, including screens (e.g., TVs, computers, laptops, smartphones, tablets) and light from fluorescent and LED lamps. Due to this wide range of applications, the effects of blue light exposure (BLE) on the human physiology need to be thoroughly studied. Aim:...
Article
Full-text available
Light evokes robust visual and nonvisual physiological and psychological effects in humans, such as emotional and behavioral responses, as well as changes in cognitive brain activity and performance. The aim of this study was to investigate how colored light exposure (CLE) and a verbal fluency task (VFT) interact and affect cerebral hemodynamics, o...
Article
Full-text available
[This corrects the article DOI: 10.1117/1.NPh.8.1.012101.].
Article
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Background: The COVID-19 pandemic is a global issue which affects the entire population’s mental health. This study evaluates how restrictions to curtail this pandemic change parenting self-efficacy, depressive symptoms, couple satisfaction and health-related quality of life in parents after delivery of a newborn. Methods: In this prospective singl...
Article
Full-text available
Some experiments seem to yield strong evidence of variability of beta-decay rates, but other experiments may show little or no such evidence. Some recent experiments help clarify the situation. In particular, a certain oscillation appears in neutrino measurements made at the Super-Kamiokande Neutrino Observatory and in radon beta-decay measurements...
Article
Full-text available
The application of functional near-infrared spectroscopy (fNIRS) in the neurosciences has been expanding over the last 40 years. Today, it is addressing a wide range of applications within different populations and utilizes a great variety of experimental paradigms. With the rapid growth and the diversification of research methods, some inconsisten...
Article
Full-text available
When brain activity is measured by neuroimaging, the canonical hemodynamic response (increase in oxygenated hemoglobin ([O2Hb]) and decrease in deoxygenated hemoglobin ([HHb])) is not always seen in every subject. The reason for this intersubject-variability of the responses is still not completely understood. This study is performed with 32 health...
Article
BACKGROUND In modern society, we are increasingly exposed to numerous sources of blue light, including screens (e.g., TVs, computers, laptops, smartphones, tablets) and light from fluorescent and LED lamps. Due to this wide range of applications, the effects of blue light exposure (BLE) on the human physiology need to be thoroughly studied. AIM To...
Article
Preterm births (< 37 weeks of gestational age) account for approximately 5-10 % of all live births in European countries, and the prevalence is generally increasing worldwide. Complications due to preterm birth are the leading causes of death of children younger than 6 years (18 % of all deaths) and newborns (35 % of all deaths), and being born pre...
Article
Full-text available
Following the outbreak of a novel coronavirus (SARS-CoV-2) associated with pneumonia in China (Corona Virus Disease 2019, COVID-19) at the end of 2019, the world is currently facing a global pandemic of infections with SARS-CoV-2 and cases of COVID-19. Since severely ill patients often show elevated methemoglobin (MetHb) and carboxyhemoglobin (COHb...
Article
Full-text available
Significance: The reliability of functional near-infrared spectroscopy (fNIRS) measurements is reduced by systemic physiology. Short-channel regression algorithms aim at removing systemic "noise" by subtracting the signal measured at a short source-detector separation (mainly scalp hemodynamics) from the one of a long separation (brain and scalp he...
Article
Full-text available
The development of the neonatal gastrointestinal tract microbiota remains a poorly understood process. The interplay between neonatal (gestational age, genetic background), maternal (mode of delivery, nutritional status) and environmental factors (antibiotic exposure, available nutrition) are thought to influence microbial colonization, however, th...
Article
Full-text available
Significance: The reliability of functional near-infrared spectroscopy (fNIRS) measurements is reduced by systemic physiology. Short-channel regression algorithms aim at removing systemic “noise” by subtracting the signal measured at a short source–detector separation (mainly scalp hemodynamics) from the one of a long separation (brain and scalp he...
Article
Full-text available
Standard (Lomb-Scargle, likelihood, etc.) procedures for power-spectrum analysis provide convenient estimates of the significance of any peak in a power spectrum, based—typically—on the assumption that the measurements being analyzed have a normal (i.e. Gaussian) distribution. However, the measurement sequence provided by a real experiment or a rea...
Article
Full-text available
Significance: Our study reveals that frontal cerebral oxygenation asymmetry (FCOA), i.e. a difference in the oxygenation between the right and left prefrontal cortex (PFC), is a real phenomenon in healthy human subjects at rest. Aim: To investigate FCOA, we performed a study with 134 healthy right-handed subjects with the systemic physiology augmen...
Article
Full-text available
In the literature, it is well established that regular physical exercise is a powerful strategy to promote brain health and to improve cognitive performance. However, exact knowledge about which exercise prescription would be optimal in the setting of exercise-cognition science is lacking. While there is a strong theoretical rationale for using ind...
Article
Full-text available
For several years, reports have been published about fluctuations in measured radioactive decay time-series and in some instances linked to astrophysical as well as classical environmental influences. Anomalous behaviors of radioactive decay measurement and measurement of capacitance inside and outside a modified Faraday cage were documented by our...
Article
Full-text available
In 2015, meningeal lymphatic vessels (mLVs) were (re)discovered in mice and human dura specimens. Two years later, the first report was published showing that mLVs can be detected in humans in vivo by high-resolution 3 Tesla magnetic resonance imaging (MRI). In 2017 and 2018, two further studies reported the successful MRI-based detection of mLVs i...
Article
Full-text available
Time-series of background radiation (measured inside a multilayer structure), geomagnetic activity, and cosmic-ray activity has been analyzed using linear correlation analysis and a new correlation measure based on the one-dimensional component of the fourth-order cumulant. The new method is proposed based on the fact that the cumulant of a random...