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Introduction
Engineer by training with an inter-disciplinary focus (ecosystem management, ecology, life sciences, socioeconomic), I completed a PhD in 2018 at the interface between ecology and social science at the University of Montpellier/MARBEC (France) and James Cook University/ARC Centre of Excellence of Coral Reefs Studies (Australia).
My current research aims to understand how the heterogeneity of socio-economic and ecological drivers affect the facets of fish biodiversity in coral reef ecosystems.
Additional affiliations
Publications
Publications (53)
The depletion of natural resources has become a major issue in many parts of the world, with the most accessible resources being most at risk. In the terrestrial realm, resource depletion has classically been related to accessibility through road networks. By contrast, in the marine realm, the impact on living resources is often framed into the Mal...
Aim
Functional diversity is a key facet of biodiversity that is increasingly being measured to quantify its changes following disturbance and to understand its effects on ecosystem functioning. Assessing the functional diversity of assemblages based on species traits requires the building of a functional space (dendrogram or multidimensional space)...
The exceptional diversity of shallow‐water marine fishes contributes to the nutrition of millions of people worldwide through coastal wild‐capture fisheries, with different species having diverse nutritional profiles. Fishes in ecosystems are reservoirs of micronutrients with benefits to human health. Yet, the amount of micronutrients contained in...
The amount of ocean protected from fishing and other human impacts has often been used as a metric of conservation progress. However, protection efforts have highly variable outcomes that depend on local conditions, which makes it difficult to quantify what coral reef protection efforts to date have actually achieved at a global scale. Here, we dev...
Anthropogenic activities are eroding biodiversity and its contributions to nature and people worldwide. Yet, the dual imperative to protect nature and sustain human well-being raises potential trade-offs that remain to be quantified. Using standardized fish surveys across 1,237 tropical reefs worldwide, we converted the presence and abundance data...
Small-scale fisheries provide nutrients to hundreds of millions of people worldwide, with yields dependent on the condition of marine habitats such as coral reefs. Small-scale fisheries are a particularly important food source in societies with nutrient deficiencies and where unhealthy food alternatives are widely available. Using data from coral r...
Islands have been used as model systems to study ecological and evolutionary processes, and they provide an ideal set‐up for validating new biodiversity monitoring methods. The application of environmental DNA metabarcoding for monitoring marine biodiversity requires an understanding of the spatial scale of the eDNA signal, which is best tested in...
Seafood is an important source of bioavailable micronutrients supporting human health, yet it is unclear how micronutrient production has changed in the past or how climate change will influence its availability. Here combining reconstructed fisheries databases and predictive models, we assess nutrient availability from fisheries and mariculture in...
Biodiversity drives stability in communities, allowing it to withstand environmental fluctuations without changes in aggregate properties like total abundance or biomass. We investigated biodiversity’s influence on two crucial population-level mechanisms governing abundance stability in mesopredatory coral reef fishes: ‘community asynchrony,’ where...
Coral reef fisheries supply nutritious catch to tropical coastal communities, where the quality of reef seafood is determined by both the rate of biomass production and nutritional value of reef fishes. Yet our understanding of reef fisheries typically uses targets of total reef fish biomass rather than individual growth (i.e. biomass production) a...
Aim
Coastal fishes have a fundamental role in marine ecosystem functioning and contributions to people, but face increasing threats due to climate change, habitat degradation and overexploitation. The extent to which human pressures are impacting coastal fish biodiversity in comparison with geographic and environmental factors at large spatial scal...
Seafood is expected to play a key role in improving access to healthy diets while providing food products with relatively low rates of greenhouse gas emissions. However, both nutrients and carbon footprints vary among species and production methods, and seafood consumption is further influenced by price and consumer preference, such that it is uncl...
Wild-caught fish provide an irreplaceable source of essential nutrients in food-insecure places. Fishers catch thousands of species, yet the diversity of aquatic foods is often categorized homogeneously as ‘fish’, obscuring an understanding of which species supply affordable, nutritious and abundant food. Here, we use catch, economic and nutrient d...
Tropical reefs and the fish relying on them are under increasing pressure. Shallow-reef fish provide important ecological information in addition to sustaining fisheries, tourism and more. Although empirical metrics of fish biomass are widely used in fisheries management, metrics of biomass production—how much new biomass is produced over time—are...
Injustices are prevalent in food systems, where the accumulation of vast wealth is possible for a few, yet one in ten people remain hungry. Here, for 194 countries we combine aquatic food production, distribution and consumption data with corresponding national policy documents and, drawing on theories of social justice, explore whether barriers to...
The sustainability of coral reef fisheries is jeopardized by complex and interacting socio-ecological stressors that undermine their contribution to food and nutrition security. Climate change has emerged as one of the key stressors threatening coral reefs and their fish-associated services. How fish nutrient concentrations respond to warming ocean...
Effective solutions to the ongoing “coral reef crisis” will remain limited until the underlying drivers of coral reef degradation are better understood. Here, we conduct a global-scale study of how four key metrics of ecosystem states and processes on coral reefs (top predator presence, reef fish biomass, trait diversity, and parrotfish scraping po...
Increasing speed and magnitude of global change threaten the world’s
biodiversity and particularly coral reef fishes. A better understanding of
large-scale patterns and processes on coral reefs is essential to prevent fish
biodiversity decline but it requires new monitoring approaches. Here, we
use environmental DNA metabarcoding to reconstruct wel...
Tropical reefs provide livelihood and food security to millions of people. However, tropical reefs are entering new configurations requiring management strategies to incorporate process-oriented measures such as biomass production to determine their dynamics and resilience. We proposed a new framework, comprising three management strategies based o...
Wild-caught fish are a bioavailable source of nutritious food that, if managed strategically , could enhance diet quality for billions of people. However, optimising nutrient production from the sea has not been a priority, hindering development of nutrition-sensitive policies. With fisheries management increasingly effective at rebuilding stocks a...
Climate change is transforming coral reefs, threatening supply of essential dietary micronutrients from small-scale fisheries to tropical coastal communities. Yet the nutritional value of reef fisheries and climate impacts on micronutrient availability remain unclear, hindering efforts to sustain food and nutrition security. Here, we measure nutrie...
Functional diversity (FD), the diversity of organism attributes that relates to their interactions with the abiotic and biotic environment, has been increasingly used for the last two decades in ecology, biogeography and conservation. Yet, FD has many facets and their estimations are not standardized nor embedded in a single tool. mFD (multifaceted...
Quantifying fish species diversity in rich tropical marine environments remains challenging.
Environmental DNA (eDNA) metabarcoding is a promising tool to face this
challenge through the filtering, amplification, and sequencing of DNA traces from
water samples. However, because eDNA concentration is low in marine environments,
the reliability of eD...
Coral reefs are harbingers of environmental change. In this issue of One Earth, Eddy et al. analyze long-term declines in reef condition and fish catches. Here, we highlight how policies that secure coral reefs as local food systems can safeguard diverse, nutrient rich diets and support vulnerable social-ecological systems.
Estuaries are characterized by a tidal regime and are strongly influenced by hydrodynamics and host diverse and highly dynamic habitats, from fresh, brackish, or saltwater to terrestrial, whose biodiversity is especially difficult to monitor. Here, we investigated the potential of environmental DNA (eDNA) metabarcoding, with three primer sets targe...
Fish are rich in bioavailable micronutrients, such as zinc and iron, deficiencies of which are a global food security concern.¹,² Global marine fisheries yields are threatened by climate change and overfishing,³,⁴ yet understanding of how these stressors affect the nutrients available from fisheries is lacking.⁵,⁶ Here, using global assessments of...
Quantifying the diversity of species in rich tropical marine environments remains challenging. Environmental DNA (eDNA) metabarcoding is a promising tool to face this challenge through the filtering, amplification, and sequencing of DNA traces from water samples. However, the reliability of biodiversity detection from eDNA samples can be low in mar...
Abstract for DNAQUA International Conference : international Conference on the Use of DNA for Water Biomonitoring - 2021
Coral reefs host the highest fish diversity on Earth despite covering less than 0.1% of the ocean’s seafloor. At the same time they are also extremely threatened. Data syntheses over decades of surveys estimate the total number of coral reef fishes to vary from 2,400 to 8,000 species distributed among roughly 100 families. But this diversity remain...
Islands have traditionally served as model systems to study ecological and evolutionary processes (Warren et al. 2015) and could also represent a relevant system to study environmental DNA (eDNA). Isolated island reefs that are affected by climatic threats would particularly benefit from cost- and time-efficient biodiversity surveys to set prioriti...
Environmental DNA (eDNA) analysis is a revolutionary method to monitor marine biodiversity from animal DNA traces. Examining the capacity of eDNA to provide accurate biodiversity measures in species‐rich ecosystems such as coral reefs is a prerequisite for their application in long‐term monitoring. Here, we surveyed two Colombian tropical marine re...
Rapid degradation of the world's coral reefs jeopardizes their ecological functioning and ultimately imperils the well-being of the millions of people with reef-dependent livelihoods. Ecosystem accessibility is the main driver of their conditions, with the most accessible ecosystems being most at risk of resource depletion. People's socioeconomic c...
Many islands are biodiversity hotspots but also extinction epicenters. In addition to strong cultural connections to nature, islanders derive a significant part of their economy and broader wellbeing from this biodiversity. Islands are thus considered as the socio-ecosystems most vulnerable to species and habitat loss. Yet, the extent and key corre...
A complex landscape for reef management
Coral reefs are among the most biodiverse systems in the ocean, and they provide both food and ecological services. They are also highly threatened by climate change and human pressure. Cinner et al. looked at how best to maximize three key components of reef use and health: fish biomass, parrotfish grazing,...
Wilderness areas offer unparalleled ecosystem conditions. However, growing human populations and consumption are among factors that drive encroachment on these areas. Here, we explore the threat of small‐scale fisheries to wilderness reefs by developing a framework and modeling fluctuations in fishery range with fuel costs and fish prices. We model...
Coral reef fisheries depend on reef fish biomass to support ecosystem functioning and sustainable fisheries. Here, we evaluated coral reefs across 4,000 km of the Indonesian archipelago to reveal a large gradient of biomass, from <100 kg/ha to >17,000 kg/ha. Trophic pyramids characterized by planktivore dominance emerged at high biomass, suggesting...
The observation of trophic interactions such as predation provide valuable information to model food webs and better understand ecosystem functioning. Such information is crucial for rare and endangered species in order to adapt management measures and ensure their conservation. However, trophic interactions are rarely observed in the marine realm,...
[This corrects the article DOI: 10.1371/journal.pbio.3000366.].
Without drastic efforts to reduce carbon emissions and mitigate globalized stressors, tropical coral reefs are in jeopardy. Strategic conservation and management requires identification of the environmental and socioeconomic factors driving the persistence of scleractinian coral assemblages—the foundation species of coral reef ecosystems. Here, we...
Since the 1950s, industrial fisheries have expanded globally, as fishing vessels are required to travel further afield for fishing opportunities. Technological advancements and fishery subsidies have granted ever-increasing access to populations of sharks, tunas, billfishes, and other predators. Wilderness refuges, defined here as areas beyond the...
Aim
To investigate biotic and abiotic correlates of reef‐fish species richness across multiple spatial scales.
Location
Tropical reefs around the globe, including 485 sites in 109 sub‐provinces spread across 14 biogeographic provinces.
Time period
Present.
Major taxa studied
2,523 species of reef fish.
Methods
We compiled a database encompassin...
Determining whether many functionally complementary species or only a subset of key species are necessary to maintain ecosystem functioning and services is a critical question in community ecology and biodiversity conservation. Identifying such key species remains challenging, especially in the tropics where many species co-occur and can potentiall...
Significance
Marine reserves that prohibit fishing are a critical tool for sustaining coral reef ecosystems, yet it remains unclear how human impacts in surrounding areas affect the capacity of marine reserves to deliver key conservation benefits. Our global study found that only marine reserves in areas of low human impact consistently sustained t...
Sobral et al. (Ecology Letters, 19, 2016, 1091) reported that the loss of bird functional and phylogenetic diversity due to species extinctions was not compensated by exotic species introductions. Here, we demonstrate that the reported changes in biodiversity were underestimated because of methodological pitfalls.
Ongoing declines in the structure and function of the world's coral reefs require novel approaches to sustain these ecosystems and the millions of people who depend on them. A presently unexplored approach that draws on theory and practice in human health and rural development is to systematically identify and learn from the 'outliers'-places where...