Elisa Corteggiani CarpinelliUniversity of Padova | UNIPD · Interdepartmental Research Centre for Innovative Biotechnologies CRIBI
Elisa Corteggiani Carpinelli
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January 2011 - June 2013
- PostDoc Position
- I worked on the genomic, transcriptomic and bioinformatic analysis of Nannochloropsis gaditana and on the metagenomic analysis of environmental samples. During this period I worked as Teaching Assistant in Genomics and Biochemistry.
Alternative splicing (AS) significantly enhances transcriptome complexity. It is differentially regulated in a wide variety of cell types and plays a role in several cellular processes. Here we describe a detailed survey of alternative splicing in grape based on 124 SOLiD RNAseq analyses from different tissues, stress conditions and genotypes. We u...
Nannochloropsis is rapidly emerging as a model organism for the study of biofuel production in microalgae.Here we report a high quality genomic assembly of Nannochloropsis gaditana, consisting of large contigs, up to 500 kbp long, and scaffolds that in most cases span the entire length of chromosomes. We identified 10,646 complete genes and charact...
Next generation sequencing technology has considerably improved over the past few years, making easier and more affordable the shotgun sequencing approach. Short reads are particularly popular as they are very easy and cheap to produce. On the other hand, their assembly results in the generation of a vast number of relatively short contigs that wou...