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Dr Stefan TheisenUniversity of Rostock · Professorship for Aquaculture and Sea-Ranching (AQ)
Dr Stefan Theisen
PhD Dr. rer. nat. Dipl. Biol.
About
33
Publications
10,164
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276
Citations
Introduction
I am working on metazoan marine fish parasites in Indonesia, a marine biodiversity center, since many years. Recently I published a host-parasite checklist for those waters.
As the head of our institute's microscopy and DNA laboratories, I am experienced in morphometry, taxonomy, phylogeny and new species descriptions.
Besides, I am involved in various projects dealing with algae, copepod and fish breeding in commercial scales, especially in aquaponic systems (animal biology & management).
Additional affiliations
Education
June 2003 - June 2008
Publications
Publications (33)
Taxonomic issues within Trypanorhyncha, e.g., the inaccurate light microscopic visualisation of the hook patterns, are solvable by confocal laser scanning microscopy (CLSM). We applied CLSM imaging to study Trygonicola macropora (Shipley et Hornell, 1906) and Dollfusiella michiae (Southwell, 1929) from Neotrygon caeruliopunctata Last, White et Sére...
With the opening of the Suez Canal as a link between the Red Sea and the Mediterranean Sea in 1869, the biogeographical event of the Lessepsian migration has been starting. Aided by beneficial conditions in the new habitat, almost 500 marine species have immigrated and often established themselves in the Mediterranean Sea, including several pufferf...
Purpose
The stomachs and spiral valves of sharks and rays were examined for their trypanorhynch (Cestoda) parasite fauna and dietary items to infer feeding ecology. In Indonesia, sharks and rays have been experiencing increasing awareness and conservation in the recent years due to high fisheries activities and to avoid future species extinction....
Background
The most convincing species of Allopodocotyle Pritchard, 1966 (Digenea: Opecoelidae) are known overwhelmingly from groupers (Serranidae: Epinephelinae). Six species of Allopodocotyle have been reported, collectively, from species of Cromileptes Swainson, 1839, Epinephelus Bloch, 1793 and Plectropomus Oken, 1817. These are A. epinepheli (...
Echinocephalus caniculusn. sp. (Nematoda, Gnathostomatidae Railliet, 1895) was isolated from the spiral valve of the lesser spotted dogfish Scyliorhinus canicula (L.) from the waters off Kalaat El Andalous, North East Tunisia. This new species is mainly characterized by a cephalic bulb armed with 31–39 transverse rows of uncinated hooks, a comparat...
Aspidogaster limacoides Diesing, 1834 (Aspidogastridae) is redescribed based on light and scanning electron microscopy of specimens from the stomach and intestine of Abramis brama, Rutilus rutilus and Scardinius erythrophthalmus (Actinopterygii: Cyprinidae). The fishes were sampled during 2018 and 2019 at Lake Tollense in Mecklenburg-Western Pomera...
Purpose Fish parasites can cause diseases in humans and lead to commercial losses in fisheries and aquaculture. The objectives
of this study were to analyze E. ongus’s parasite fauna regarding food safety and parasite transmission risk between
Epinephelus species and test whether E.ongus populations can be distinguished by their parasite community....
Purpose:
Endoparasitic nematodes of six harbour porpoises Phocoena phocoena and four grey seals Halichoerus grypus, stranded at the eastern coast of the Baltic Sea in Germany in winter 2019, were analysed in order to identify nematode parasites and to compare with recent studies from the same area.
Methods:
Endoparasitic nematodes were identifie...
This thesis covers the speciose parasite fauna of marine, free-living Indonesian teleost fishes. A literature collection since 1840 was evaluated. Adding 678 new parasite records from the present study, a total of 3,005 host-parasite records of 621 parasite species from 315 free-living marine Indonesian teleost species are presented. New species de...
The new species Bucephalus damriyasai n. sp. is described from Caranx heberi (Bennett) from off Bali, Indonesia. It can be distinguished from other Bucephalus spp. recorded from carangid hosts by its narrow elongate body shape and the relatively long distance between the rhynchus and the vitellarium, as well as other features distinguishing it from...
A new endoparasitic monogenean of Paradiplectanotrema Gerasev, Gayevskaya & Kovaleva, 1987, Paradiplectanotrema klimpeli sp. nov., is described from the southern Balinese coast, Indonesia. The new species is much larger, wider and characterized by the longest dorsal anchors compared with the congeners. Ventral anchors and ventral bars are the small...
An endoparasitic monogenean was identified for the first time from Indonesia. The oesopha-gus and anterior stomach of the croakers Nibea soldado (Lacé pède) and Otolithes ruber (Bloch & Schneider) (n = 35 each) sampled from the South Java coast in May 2011 and Joh-nius amblycephalus (Bleeker) (n = 2) (all Sciaenidae) from Kedonganan fish market, So...
The generated sequences were aligned with their closest matches in GenBank (23 ingroup and Actinocleidus recurvatus as an outgroup taxa). Phylogenetic analysis based on General Time Reversible Model with complete deletion used as gaps missing data treatment. The robustness was assessed using a bootstrap procedure with 1,000 replications [20–21]. Fo...
Confocal microscopy illustrations of the opisthaptor with hooks, anchors and bars (dorsal bar concave anterior) (A), with focus on the inner two (of seven) pairs of hooks, partially overlaid by the ventral anchor with both its bars (B) and the same in detail (C), https://figshare.com/s/75cc37ed9297dc11d983.
Calculation of best fitting model for phylogeny studies.
https://figshare.com/s/75cc37ed9297dc11d983.
(XLS)
Comparative linear measures for Pseudempleurosoma haywardi sp. nov. from the type host Nibea soldado (Sciaenidae).
All measurements in μm, https://figshare.com/s/75cc37ed9297dc11d983.
(XLSX)
Comparative linear measures for Pseudempleurosoma haywardi sp. nov. from the additional host Otolithes ruber (Sciaenidae).
All measurements in μm, https://figshare.com/s/75cc37ed9297dc11d983.
(XLSX)
Confocal photos of the haptor of Pseudempleurosoma haywardi sp. nov.
Confocal microscopy illustrations of the opisthaptor with hooks, anchors and bars (dorsal bar concave anterior) (A), with focus on the inner two (of seven) pairs of hooks, partially overlaid by the ventral anchor with both its bars (B) and the same in detail (C), https://figshare....
Alignment of sequences.
https://figshare.com/s/75cc37ed9297dc11d983.
(TIF)
Permission to use Fig 4.
https://figshare.com/s/75cc37ed9297dc11d983.
(TIF)
Indonesia at the centre of marine biodiversity lacks information on fish parasites. During a sampling of 136 teleost species from Indonesian waters, 22 of them were infected with larvae of Anisakis Dujardin, 1845, a genus with zoonotic potential. We genetically identified 118 worms, provide a revision of all available sequences of the ITS-1, -2 and...
In this study we analysed fecal bacterial communities and parasites of three important Indonesian fish species, Epinephelus fuscoguttatus, Epinephelus sexfasciatus and Atule mate. We then compared the biodiversity of bacterial communities and parasites of these three fish species collected in highly polluted Jakarta Bay with those collected in less...
Number of raw sequence reads, merged paired reads, post-QA/QC sequence reads, and number of taxonomically classified reads.
The light grey and dark grey dashed lines represent the average number of raw sequence reads and taxonomically classified sequence reads across all samples.
(TIFF)
Rarefaction curves.
(TIFF)
The objective of this study was to assess the environmental conditions of a heavily polluted marine habitat using descriptors of fish parasites. Epinephelus coioides from Jakarta Bay as well as off Jakarta Bay was studied for metazoan parasites. Based on 70 fish and considering previous studies (230 fish), an environmental indicator system was desi...
SUMMARY This study provides the first comprehensive information on the parasite fauna of the white-streaked grouper Epinephelus ongus . A total of 35 specimens from the archipelago Karimunjawa, Java Sea, Indonesia were studied for metazoan parasites. For comparison, the documented parasite community of 521 E. areolatus , E. coioides and E. fuscogut...
The present study represents the first molecular-chemical screening by pyrolysis-field ionization mass spectrometry applied on fish parasites. A total of 71 fishes from Balinese fish markets, 36 Auxis rochei (Risso, 1810) and 35 A. thazard (Lacepède, 1800), were studied for their acanthocephalan parasites. This is the first record of Rhadinorhynchu...
The objective of this study was to assess the environmental conditions of a heavily polluted marine habitat using descriptors of fish parasites. Epinephelus coioides from Jakarta Bay as well as off Jakarta Bay was studied for metazoan parasites. Based on 70 fish and considering previous studies (230 fish), an environmental indicator system was desi...
Sixty Epinephelus areolatus were examined for metazoan fish parasites in Indonesia, off Segara Anakan lagoon, Java and in Balinese waters. The study revealed 21 different parasite species, and 14 new host and locality records. The anisakid nematodes Anisakis typica and, for the first time in Indonesia, Anisakis sp. HC-2005 were identified by using...
Questions
Questions (5)
Dear colleagues,
when describing and naming a new species, many authors make a mistake, they postulate a malformed suffix.
E.g., the species Pseudempleurosoma guanabarense Carvalho & Luque, 2012 was originally named Pseudempleurosoma guanabarensis in its species description.
But because of the latin or greek grammar, the "-sis" is not correctly fitting to "-soma". Therefore, the scientific community declared the originally chosen name a malformed suffix, says the name is unaccepted, and changed the species name to the grammatically correct "-se" (without a publication by the way).
So the question is: When describing and naming a new species, what are the correct grammatical rules for either latin or greek names? Probably it is just the declination? But how can I know if a genus name is either a, o, u or another declination type? Are common rules applicable? Do I need a latin and a greek dictionary to check the declination and the sex/gender masculinum, femininum, neutrum?
I used to learn latin in school, however, it's still difficult for me.
Thank you, Yours,
Stefan
Dear colleagues,
German libraries, universities and the internet seem not to be able to provide following two Indian/Pakistani papers, both Bilqees et al., 2003 & 2005 (and Indian/Pakistani universities do not respond to mails):
Bilqees, F. M., Hadi, R., Khatoon, N., Muti-ur-Rahman, & Perveen, S. (2009).
Qadriana otolithi n.sp., (Hemuridae: Dinurinae Looss, 1907) from the fish Otolithus argenteus (Sciaenidae) of Karachi coast, Pakistan. International Journal of Biology and Biotechnology, 6, 109-111.
Bilqees, F. M., Khatoon, N., & Hadi, R. (2005).
A new species of the genus Stromaturus Bilqees & Khatoon, 2003 from a fish, Otolithus argenteus of Karachi coast. Journal of Experimental Zoology India, 8, 435-439.
Dear colleagues,
can anybody provide the email address for Deepa Sahai and/or H.D. Srivastava? They (used to) work at University of Allahabad, India. I have a scientific question on Indian fish parasitic Digenea, but cannot find their contact data.
Thank you very much,
Yours,
Stefan Theisen
Keywords: Digenea, trematoda, teleost fish, India
Dear colleagues,
it is impossible for me to find her email adress contact data, can anybody provide it to me please?
EDIT Stefan 9th. Nov: I was now informed that she passed away in 2015...
Regards from Germany,
Yours,
Stefan
Hello,
I want to organize a plate reader and the colometric chemicals for water analysis.
Can you recommend methods for water analysis of ammonium, nitrite, nitrate, phosphate, salinity, turbidity, conductivity, as well as for micro - and macro-nutrients in plant nutrition, such as potassium, calcium, magnesium, sulfur, chlorine, iron, manganese, zinc, copper, boron, molybdenum? What are the methods for nutrient analysis of e.g. raw protein, various amino acids, crude fat, various fatty acids (E.g. n-3, n-6), carbohydrates, NFE, ash etc?
In particular the preparation of the samples (comes from aquaculture, aquaponic and fish body analysis) is of our interest.
Especially what calibration curves should be created and which reagents must be used (company?).
We would also like to know the reagents' prices to do a cost planning.
Thank you very much,
Stefan Theisen