David WilbyBritish Antarctic Survey | BAS
David Wilby
BSc (Bath) PhD (Bristol)
About
30
Publications
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Introduction
Research Software Engineer at the British Antarctic Survey.
Additional affiliations
Education
September 2014 - October 2014
September 2011 - February 2015
September 2010 - August 2011
Publications
Publications (30)
Polarization vision is used by a wide range of animals for navigating, orienting, and detecting objects or areas of interest. Shallow marine and semi-terrestrial crustaceans are particularly well known for their abilities to detect predator-like or conspecific-like objects based on their polarization properties. On land, some terrestrial invertebra...
Both vertebrates and invertebrates commonly exploit photonic structures adjacent to their photoreceptors for visual benefits. For example, use of a reflecting structure (tapetum) behind the retina increases photon capture, enhancing vision in dim light. Colored filters positioned lateral or distal to a photoreceptive unit may also be used to tune s...
Many insects have triplets of camera type eyes, called ocelli, whose function remains unclear for most species. Here, we investigate the ocelli of the bumblebee, Bombus terrestris , using reconstructed 3D data from X-ray micro computed-tomography scans combined with computational ray-tracing simulations. This method enables us, not only to predict...
Animals can make use of camouflage to reduce the likelihood of visual detection or recognition and thus improve their chances of survival. Background matching, where body colouration is closely matched to the surrounding substrate, is one form of camouflage. Hermit crabs have the opportunity to choose their camouflage independently of body colourat...
In "Polarisation vision: overcoming challenges of working with a property of light we barely see" (Foster et al. 2018) we provide a basic description of how Stokes parameters can be estimated and used to calculate the angle of polarisation (AoP).
In recent years, the study of polarisation vision in animals has seen numerous breakthroughs, not just in terms of what is known about the function of this sensory ability, but also in the experimental methods by which polarisation can be controlled, presented and measured. Once thought to be limited to only a few animal species, polarisation sensi...
In recent years, the study of polarization vision in animals has seen numerous breakthroughs, not just in terms of what is known about the function of this sensory ability, but also in the experimental methods by which polarization can be controlled, presented and measured. Once thought to be limited to only a few animal species, polarization sensi...
Many animals use structural coloration to create bright and conspicuous visual signals. Selection of the size and shape of the optical structures animals use defines both the colour and intensity of the light reflected. The material used to create these reflectors is also important; however, animals are restricted to a limited number of materials:...
Oil droplets are spherical organelles found in the cone photoreceptors of vertebrates. They are generally assumed to focus incident light into the outer segment, and thereby improve light catch because of the droplets' spherical lens-like shape. However, using full-wave optical simulations of physiologically realistic cone photoreceptors from birds...
Color guides many important behaviors in birds. Previously we have shown that the intensity threshold for color discrimination in the chicken depends on the color contrast between stimuli and their brightness. The birds could discriminate larger color contrasts and brighter colors in lower light intensities. We suggested that chickens use spatial s...
Light rays of different wavelengths are focused at different distances when they pass through a lens (longitudinal chromatic aberration [LCA]). For animals with color vision this can pose a serious problem, because in order to perceive a sharp image the rays must be focused at the shallow plane of the photoreceptor’s outer segments in the retina. A...
The PCR primers used in studies of enzyme function and expression.
(a) PCR primers used to clone in situ hybridization templates. (b) Primers used for qPCR quantification of apocarotenoid-metabolizing enzyme transcript expression in developing chicken retinas. (c) PCR primers used to clone full-length transcripts of apocarotenoid-metabolizing enzym...
The number of discriminable colors predicted using the receptor noise-limited model with species-specific ocular media transmittance, spectral sensitivity measures, and varying positions of the C-type oil droplet filtering cutoff.The increment spectral sensitivity values calculated for the 11 UVS and 7 VS species with matched and mismatched C-type...
The species included in our phylogenetic comparison of retina apocarotenoid composition.
The tuning of the SWS1 opsin is inferred from the amino acid at position 90 of the second transmembrane helix (Ödeen and Håstad, 2013; 2009). The amino acid sequence was either derived from previously published studies or was determined by sequencing of genomic...
The measured oil droplet spectra, pure carotenoid spectra, and model fit parameters for each measured C-type droplet.DOI:
http://dx.doi.org/10.7554/eLife.15675.011
The species and visual system parameters used to model avian color discrimination.
DOI:
http://dx.doi.org/10.7554/eLife.15675.021
Apocarotenoid concentration and transcript expression levels for each biological and technical replicate.DOI:
http://dx.doi.org/10.7554/eLife.15675.016
ELife digest
The pioneering eye doctor André Rochon-Duvigneaud once wrote that “a bird is a wing guided by an eye”. With this statement, he underscored the sophistication of the bird’s eye, which surpasses our own in several respects. Compared to humans who have three types of cone photoreceptor, birds have four, meaning they can see an extra dimen...
Colour constancy is the capacity of visual systems to keep colour perception constant despite changes in the illumination spectrum. Colour constancy has been tested extensively in humans and has also been described in many animals. In humans, colour constancy is often studied quantitatively, but besides humans, this has only been done for the goldf...
Many biophotonic structures have their spectral properties of reflection ‘tuned’ using the (zeroth-order) Bragg criteria for phase constructive interference. This is associated with a periodicity, or distribution of periodicities, parallel to the direction of illumination. The polarization properties of these reflections are, however, typically con...
Vision is the primary sensory modality of birds, and its importance is evident in the sophistication of their visual systems. Coloured oil droplets in the cone photoreceptors represent an adaptation in the avian retina, acting as long-pass colour filters. However, we currently lack understanding of how the optical properties and morphology of compo...
Avian vision is among the most highly developed of all animals. Birds utilise fine spatial acuity and colour discrimination, visual abilities mediated by a set of six photoreceptor types. The single cones and double cones, used in chromatic vision and achromatic motion perception respectively, include structural adaptations which govern their optic...
Photon absorption is the primary event in vision. Whilst the sensitivity of an eye is governed by a number of factors, one of the most fundamental is the quantum efficiency of the photon absorption. Previous measurements have investigated whether insect retinal cells are capable of detecting single photons1. The results suggest a process of photon...