Clemence Bonnot

Clemence Bonnot
  • PhD
  • Research project leader at French National Institute for Agriculture, Food, and Environment (INRAE)

About

18
Publications
5,905
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700
Citations
Introduction
Plant molecular physiologist working on tree - microbes interactions. Taking a large overview, I aim to decipher molecular mechanisms governing the integration of nutritive needs, environmental stresses and fungal symbiotic associations in trees. In a nutshell, and for the moment, I work on the regulation of ectomycorrhizal symbiosis by nutrient stresses in poplar.
Current institution
French National Institute for Agriculture, Food, and Environment (INRAE)
Current position
  • Research project leader
Additional affiliations
January 2008 - June 2008
French National Institute for Agriculture, Food, and Environment (INRAE)
Position
  • Final year Master's Student Intern
Description
  • Functional characterization of SlEZ2 a Tomato Enhancer of Zeste (Polycomb gene) by developmental phenotyping of SlEZ2 RNAi lines and Immunocytolocalization of Epignetic marks.
June 2017 - September 2020
Research center INRA, Nancy, France
Position
  • PostDoc Position
Description
  • Investigation of the molecular mechanisms controlling the regulation of ECM symbioses by nutrient sensing in poplar.
July 2015 - May 2017
University of Oxford / Syngenta
Position
  • PhD Student
Description
  • Chemical genetics/ Herbicides/ Confidential project
Education
October 2008 - October 2011
Aix-Marseille University
Field of study
  • Plant Biology
September 2006 - June 2008
University of Bordeaux
Field of study
  • Plant Biology and Biotechnology/ Plant Genetic and development
September 2003 - June 2006
University of Bordeaux
Field of study
  • Cellular biology specialization : Plant Biology and Development

Publications

Publications (18)
Article
Full-text available
ROOT HAIR DEFECTIVE SIX‐LIKE (RSL) genes control the development of structures from single cells at the surface of embryophytes (land plants) such as rhizoids and root hairs. RSL proteins constitute a subclass (VIIIc) of the basic helix–loop–helix (bHLH) class VIII transcription factor family. The Charophyceae form the only class of streptophyte al...
Article
Full-text available
Two inorganic phosphate (Pi) uptake mechanisms operate in streptophytes and chlorophytes, the two lineages of green plants. PHOSPHATE TRANSPORTER B (PTB) proteins are hypothesized to be the Na+/Pi symporters catalysing Pi uptake in chlorophytes, whereas PHOSPHATE TRANSPORTER 1 (PHT1) proteins are the H+/Pi symporters that carry out Pi uptake in ang...
Article
Full-text available
Plants display numerous strategies to cope with phosphate (Pi)-deficiency. Despite multiple genetic studies, the molecular mechanisms of low-Pi-signalling remain unknown. To validate the interest of chemical genetics to investigate this pathway we discovered and analysed the effects of PHOSTIN (PSN), a drug mimicking Pi-starvation in Arabidopsis. W...
Preprint
Full-text available
Plants small secreted peptides (SSPs) regulate root development, immunity and symbiotic relationships in herbaceous plants. These processes are equally important for establishing functional ectomycorrhizal associations in trees. While fungal SSPs involved in ectomycorrhizal establishment have been identified, the role of plant SSPs remains largely...
Article
A sensing mechanism in mammals perceives xenobiotics and induces the transcription of genes encoding proteins that detoxify these molecules. However, it is unclear if plants sense xenobiotics, and activate an analogous signalling system leading to their detoxification. Using the liverwort Marchantia polymorpha, we tested the hypothesis that there i...
Article
Full-text available
Herbicide resistance in weeds is a growing threat to global crop production. Non-target site resistance is problematic because a single resistance allele can confer tolerance to many herbicides (cross resistance), and it is often a polygenic trait so it can be difficult to identify the molecular mechanisms involved. Most characterized molecular mec...
Preprint
Full-text available
Herbicide resistance in weeds is a growing threat to global crop production. Non-target site resistance is problematic because a single resistance allele can confer tolerance to many herbicides (cross resistance), and it is often a polygenic trait so it can be difficult to identify the molecular mechanisms involved. Most characterized molecular mec...
Preprint
Full-text available
A sensing mechanism in mammals perceives xenobiotics and induces the transcription of genes encoding proteins that detoxify these molecules. However, it is unclear if plants sense xenobiotics, and activate an analogous signalling system leading to their detoxification. Using the liverwort Marchantia polymorpha , we tested the hypothesis that there...
Article
Full-text available
Small peptides that are proteolytic cleavage products (PCPs) less than 100 amino acids are emerging as key signaling molecules that mediate cell-to-cell communication and biological processes that occur between and within plants, fungi, and bacteria. Yet, the discovery and characterization of these molecules is largely overlooked. Today, selective...
Preprint
ROOT HAIR DEFECTIVE SIX-LIKE (RSL) genes control the development of structures (e.g. rhizoids, root hairs, gemmae, mucilage papillae) that develop from single cells at the surface of diverse groups of land plants. RSL proteins constitute a subclass (VIIIc) of the basic helix loop helix (bHLH) class VIII transcription factor family. We set out to de...
Article
Land plants evolved from charophytic algae, among which Charophyceae possess the most complex body plans. We present the genome of Chara braunii; comparison of the genome to those of land plants identified evolutionary novelties for plant terrestrialization and land plant heritage genes. C. braunii employs unique xylan synthases for cell wall biosy...
Article
Full-text available
Land plants evolved from charophytic algae, among which Charophyceae possess the most complex body plans. We present the genome of Chara braunii; comparison of the genome to those of land plants identified evolutionary novelties for plant terrestrialization and land plant heritage genes. C. braunii employs unique xylan synthases for cell wall biosy...
Chapter
In spite of its importance for agriculture and 30 years of genetic studies, the phosphate-starvation signaling pathway, that allows plants to detect, respond, and adapt to changes in the phosphate concentration of the rhizosphere, remains poorly known. Chemical genetics has been increasingly and successfully used as a complementary approach to gene...
Book
In spite of its importance for agriculture and 30 years of genetic studies, the phosphate-starvation signaling pathway, that allows plants to detect, respond, and adapt to changes in the phosphate concentration of the rhizosphere, remains poorly known. Chemical genetics has been increasingly and successfully used as a complementary approach to gene...
Data
Fig. S1 Phostin (PSN) effect on the rice OsPT2 expression. Fig. S2 Effects of Phostin (PSN) structural analogues on the induction of phosphate starvation markers. Fig. S3 Acidic hydrolysis release of Phostin (PSN)11 from the active PSN analogues. Fig. S4 Relative expression level of genes related to the low‐nitrate, low‐sulphur and low‐potassium...
Article
Two essential functions are associated with the root tip: first of all, it ensures a sustained growth of the root system thanks to its role in protecting the stem cell zone responsible for cell division and differentiation. In addition, it is capable of detecting environmental changes at the root cap level, and this property provides a crucial adva...

Questions

Questions (2)
Question
I have seen a protocol using Sodium nitrite, sulfuric acid and NaOH in a 3 step process but I would like to know if something simpler exist.
Question
Can we replace it by K buffer that would do the job or is the Pi actually important for the mutagenesis process?

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