Ayco Tack

Stockholm University | SU · Department of Ecology, Environment and Plant Sciences

Background The effect of soil on the plant microbiome is well-studied. However, less is known about the impact of soil microbiome in multitrophic systems. Here we examined the effect of soil on plant and aphid microbiomes, and the reciprocal effect of aphid herbivory on the plant and soil microbiomes. We designed microcosms, which separate below an...

The biophysical drivers that affect coffee quality vary within and among farms. Quantifying their relative importance is crucial for making informed decisions concerning farm management, marketability and profit for coffee farmers. The present study was designed to quantify the relative importance of biophysical variables affecting coffee bean qual...

Metabarcoding (high‐throughput sequencing of marker gene amplicons) has emerged as a promising and cost‐effective method for characterizing insect community samples. Yet, the methodology varies greatly among studies and its performance has not been systematically evaluated to date. In particular, it is unclear how accurately metabarcoding can resol...

According to the Latitudinal Biotic Interaction Hypothesis (LBIH), the general increase in biodiversity towards lower latitudes can be partially explained by an increase in the intensity of biotic interactions. While LBIH received some support for plant-herbivores interactions, much less is known about how higher trophic levels may contribute to sh...

Despite evidence that the microbiome extends host genetic and phenotypic traits, information on how the microbiome is transmitted and maintained across generations remains fragmented. For seed-bearing plants, seeds harbor a distinct microbiome and play a unique role by linking one generation to the next. Studies on microbial inheritance, a process...

Aim: Leaves support a large diversity of fungi, which are known to cause plant diseases, induce plant defences or influence leaf senescence and decomposition. To advance our understanding of how foliar fungal communities are structured and assembled, we assessed to what extent leaf flush and latitude can explain the within- and among-tree variatio...

The multifunctional role of shade trees for conservation of biodiversity and ecosystem services in natural forests and agroforests is well documented, yet we lack insights into the impact of shade tree species identity on pest and disease dynamics on agroforestry crops such as coffee and cacao, and its implications for management. We conducted two...

Plants interact with a large diversity of microbes and insects, both below and above ground. While studies have shown that belowground microbes affect the performance of plants and aboveground organisms, we lack insights into how belowground microbial communities may shape interactions between aboveground pathogens and insects. We investigated how...

Plants interact with a multitude of microorganisms and insects, both below- and above ground, which might influence plant metabolism. Despite this, we lack knowledge of the impact of natural soil communities and multiple aboveground attackers on the metabolic responses of plants, and whether plant metabolic responses to single attack can predict re...

1. Climate change has been shown to advance spring phenology, increase the number of insect generations per year (multivoltinism), and increase pathogen infection levels. 2. However, we lack insights into the effects of plant spring phenology and the biotic environment on the preference and performance of multivoltine herbivores and whether such ef...

Knowledge about the distribution and local diversity patterns of arbuscular mycorrhizal (AM) fungi are limited for extreme environments such as the Arctic, where most studies have focused on spore morphology or root colonization. We here studied the joint effects of plant species identity and elevation on AM fungal distribution and diversity. We sa...

Many plant species produce multiple leaf flushes during the growing season, which might have major consequences for within-plant variation in chemistry and species interactions. Yet, we lack a theoretical or empirical framework for how differences among leaf flushes might shape variation in damage by insects and diseases.  We assessed the impact o...

Conventional wisdom states that genetic variation reduces disease levels in plant populations. Nevertheless, crop species have been subject to a gradual loss of genetic variation through selection for specific traits during breeding, thereby increasing their vulnerability to biotic stresses such as pathogens. We explored how genetic variation in Ar...

Current climate change is disrupting biotic interactions and eroding biodiversity worldwide. However, species sensitive to aridity, high temperatures and climate variability might find shelter in microclimatic refuges, such as leaf rolls built by arthropods. To explore how the importance of leaf shelters for terrestrial arthropods changes with lati...

Context Human disturbances can have large impacts on forest structure and biodiversity, and thereby result in forest degradation, a property difficult to detect by remote sensing. Objectives To investigate spatial variation in anthropogenic disturbances and their effects on forest structure and biodiversity. Methods In 144 plots of 20 × 20 m dist...

1. Tropical agroforestry systems provide farmers with resources for their livelihoods, but are also well recognized as refuges for biodiversity. However, the relationship between yield and biodiversity might be negative in these systems, reflecting a potential trade‐off between managing for increased yield or biodiversity. The potential for synergi...

Abstract With climate change, spring warming tends to advance plant leaf‐out. While the timing of leaf‐out has been shown to affect the quality of leaves for herbivores in spring, it is unclear whether such effects extend to herbivores active in summer. In this study, we first examined how spring and autumn phenology of seven Quercus robur genotype...

The construction of shelters on plants by arthropods might influence other organisms via changes in colonization, community richness, species composition and functionality. Arthropods, including beetles, caterpillars, sawflies, spiders, and wasps often interact with host plants via the construction of shelters, building a variety of structures such...

Pathogens are embedded in multi-trophic food webs, which often include co-occurring cryptic species within the same pathogen complex. Nonetheless, we still lack an understanding of what dimensions of the ecological niche might allow these cryptic species to coexist. We explored the role of climate, host characteristics (tree autumn phenology) and a...

Plant pathogen traits, such as transmission mode and overwintering strategy, may have important effects on dispersal and persistence, and drive disease dynamics. Still, we lack insights into how life-history traits influence spatiotemporal disease dynamics. We adopted a multifaceted approach, combining experimental assays, theory and field surveys,...

Context Human disturbances can have large impacts on forest structure and biodiversity, and thereby result in forest degradation, a property difficult to detect by remote sensing. Objectives To investigate spatial variation in anthro-pogenic disturbances and their effects on forest structure and biodiversity. Methods In 144 plots of 20 9 20 m distr...

Coffee is an important crop in the global south. However, ongoing changes in the climate system reinforce the need to quantify coffee plants' ecological and eco-physiological traits to assure coffee production in the future. One way to assess how environmental changes affect coffee performance is via leaf traits, most notably leaf carbon and nitrog...

While sustainable agriculture relies on natural pest control, we lack insights into the relative importance of bottom-up and top-down factors on pest levels, especially along broad environmental and management gradients. To this aim, we focused on bottom-up and top-down control of herbivore damage in sixty sites in the centre of origin of Arabica c...

Plants evolved in association with a diverse community of microorganisms. The effect of plant phylogeny and domestication on host–microbiome co‐evolutionary dynamics are poorly understood. Here we examined the effect of domestication and plant lineage on the composition of the endophytic microbiome of 11 Malus species, representing three major grou...

Urbanization is recognized as an important driver of the diversity and abundance of tree associated insect herbivores, but its consequences for insect herbivory are controversial. A likely source of variability among studies is the insufficient consideration of intra-urban variability in forest cover. With the help of citizen scientists, we investi...

Genetic differentiation and phenotypic plasticity jointly shape intraspecific trait variation, but their roles differ among traits. In short-lived plants, reproductive traits may be more genetically determined due to their impact on fitness, whereas vegetative traits may show higher plasticity to buffer short-term perturbations. Combining a multi-t...

Climate change is advancing the onset of phenological events, with the rate of advance varying among species and trophic levels. In addition, local populations of the same species may show genetic differences in their response to seasonal cues. If populations of interacting species differ in their response, then climate change may result in geograp...

Food webs on forest trees include plant pathogens, arthropods, and their natural enemies. To increase the understanding of the impact of a plant pathogen on herbivore-natural enemy interactions, we studied the powdery mildew fungus Erysiphe alphitoides, the phytophagous mite Schizotetranychus garmani, and the predatory and mycophagous mite Euseius...

As the world becomes more and more urbanized, it is increasingly important to understand the impacts of urban landscapes on biodiversity. Urbanization can change local habitat factors and decrease connectivity among local habitats, with major impacts on the structure of natural food webs. However, most studies have focused on single species, or com...

Seasonal life history events are often interdependent, but we know relatively little about how the relationship between different events is influenced by the abiotic and biotic environment. Such knowledge is important for predicting the immediate and evolutionary phenological response of populations to changing conditions. We manipulated germinatio...

With the current deforestation rates in tropical ecosystems, optimizing biodiversity in managed systems has become fundamental for conservation. Agroforestry has been suggested to conserve biodiversity and buffer deforestation rates, while also sustaining local livelihoods. While many studies have focused on the relation between local management in...

Plants are attacked by a large diversity of pathogens. These pathogens can affect plant growth and fitness directly, but also indirectly by inducing changes in the host plant that affect interactions with beneficial and antagonistic insects. Yet, we lack insights into the relative importance of direct and indirect effects of pathogens on their host...

Climate change can have important effects on plant performance by altering the relationship between spring temperature and other abiotic factors, such as light availability. Higher temperatures can advance plant phenology so that seedling germination takes place when days are shorter, and affect light availability for understory plants by altering...

Leaves interact with a wealth of microorganisms. Among these, fungi are highly diverse, and are known to contribute to plant health, leaf senescence and early decomposition. However, patterns and drivers of the seasonal dynamics of foliar fungal communities are poorly understood. We used a multi-factorial experiment to investigate the influence of...

Agroforestry systems can provide habitats for a rich biodiversity including multitrophic interactions, which presents opportunities to develop natural pest control. Shade coffee systems in several coffee growing areas of the world host such unique habitats where pests and their natural enemies interact. One of the major global challenges for coffee...

While top‐down control plays an important role in shaping both natural and agricultural food webs, we lack insights into how top‐down control effects vary across spatial scales. We used a multi‐scale survey of top‐down control of coffee pests and diseases by arboreal ants to examine if colony location creates a small‐scale mosaic in top‐down contro...

While Ethiopia has six species of stingless bees, indigenous knowledge of them has not been well documented. In southwestern Ethiopia, we documented the Sheka community’s knowledge of stingless bees. We used the snowball sampling technique to locate 60 experienced honey collectors, conducted semi-structured interviews, and complemented interviews w...

Current climate change is disrupting biotic interactions and eroding biodiversity worldwide. However, species sensitive to drought, high temperatures and climate variability might persist in microclimatic refuges, such as leaf shelters built by arthropods. We conducted a distributed experiment across an 11,790 km latitudinal gradient to explore how...

Premise: Abiotic factors and plant species traits have been shown to drive latitudinal gradients in herbivory, and yet, population-level factors have been largely overlooked within this context. One such factor is plant density, which may influence the strength of herbivory and may vary with latitude. Methods: We measured insect herbivory and co...

While the environment is considered the primary origin of the plant microbiome, the potential role of seeds as a source of transmitting microorganisms has not received much attention. Here we tested the hypothesis that the plant microbiome is partially inherited through vertical transmission. An experimental culturing device was constructed to grow...

Phenotypic plasticity can mask population genetic differentiation, reducing the predictability of trait-environment relationships. In short-lived plants, reproductive traits may be more genetically determined due to their direct impact on fitness, whereas vegetative traits may show higher plasticity to buffer short-term perturbations. Combining a m...

Aim The strength of species interactions is traditionally expected to increase toward the Equator. However, recent studies have reported opposite or inconsistent latitudinal trends in the bottom‐up (plant quality) and top‐down (natural enemies) forces driving herbivory. In addition, these forces have rarely been studied together thus limiting previ...

The arctic and alpine regions are predicted to experience some of the highest rates of climate change, and the arctic vegetation is expected to be especially sensitive to such changes. Understanding the ecological and evolutionary responses of arctic plant species to changes in climate is therefore a key objective. Geothermal areas, where natural t...

Insects and pathogens frequently exploit the same host plant and can potentially impact each other's performance. However, studies on plant–pathogen–insect interactions have mainly focused on a fixed temporal setting or on a single interaction partner. In this study, we assessed the impact of time of attacker arrival on the outcome and symmetry of...

How community‐level specialization differs among groups of organisms, and changes along environmental gradients, is fundamental to understanding the mechanisms influencing ecological communities. In this paper, we investigate the specialization of root‐associated fungi for plant species, asking whether the level of specialization varies with elevat...

Understanding the role of interspecific interactions in shaping ecological communities is one of the central goals in community ecology. In fungal communities, measuring interspecific interactions directly is challenging because these communities are composed of large numbers of species, many of which are unculturable. An indirect way of assessing...

Background While the environment is considered the primary origin for establishing the microbiome of newly developing plants, the potential role of seeds as a source of transmitting microorganisms has not received much attention. Here we tested the hypothesis that the plant microbiome is at least partially inherited through vertical transmission. W...

Plants, including those managed by humans, are often attacked by multiple diseases. Yet, most studies focus on single diseases, even if the disease dynamics of multiple species is more interesting from a farmers’ perspective. Moreover, most studies are from single management systems, although it is valuable to understand how diseases are distribute...

Scientific knowledge in the field of ecology is increasingly enriched by data acquired by the general public participating in citizen science (CS) programs. Yet, doubts remain about the reliability of such data, in particular when acquired by schoolchildren. We built upon an ongoing CS program, 'Oak Bodyguards', to assess the ability of schoolchild...

Aim The strength of species interactions is traditionally expected to become stronger toward the Equator. However, recent studies have reported opposite or inconsistent latitudinal trends in the bottom-up (plant quality) and top-down (natural enemies) forces driving insect herbivory, possibly because these forces have rarely been studied concomitan...

When plants establish outside their native range, their ability to adapt to the new environment is influenced by both demography and dispersal. However, the relative importance of these two factors is poorly understood. To quantify the influence of demography and dispersal on patterns of genetic diversity underlying adaptation, we used data from a...

Climate change is affecting both the abiotic environment and the seasonal timing of life history events, with potentially major consequences for plant performance and plant-associated food webs. Despite this, we lack insights into how effects of plant phenology on plant performance and food webs depend on environmental conditions, and to what exten...

While Ethiopia has several species of stingless bees, indigenous knowledge on them has not been well documented. Here, we document the indigenous knowledge of the Sheka community in southwestern Ethiopia on stingless bees. We used the snowball sampling technique to locate 60 experienced honey collectors, conducted semi-structured interviews, and co...

Background and aims: Classic theory on geographical gradients in plant-herbivore interactions assumes that herbivore pressure and plant defences increase towards warmer and more stable climates found at lower latitudes. However, the generality of this trend has been recently called into question by conflicting empirical evidence. One possible expl...

One of the best known ecological consequences of climate change is the advancement of spring phenology. Yet, we lack insights into how changes in climate interact with intraspecific genetic variation in shaping spring and autumn phenology, and how such changes in phenology will translate into seasonal dynamics of tree‐associated organisms. To eluci...

Climate change may alter the dynamics of outbreak species by changing the phenological synchrony between herbivores and their host plants. As host plant phenology has a genotypic component that may interact with climate, infestation levels among genotypes might change accordingly. When the outbreaking herbivore is active early in the season, its in...

1.Climate change is shifting the distribution of species, and may have a profound impact on the ecology and evolution of species interactions. However, we know little about the impact of increasing temperature and changing rainfall patterns on the interactions between plants and their beneficial and antagonistic root symbionts. 2.Here, we used a re...

Scientific knowledge in the field of ecology is increasingly enriched by data acquired by the general public participating in citizen science (CS) programs. Yet, doubts remain about the reliability of such data, in particular when acquired by school children. We built upon an ongoing CS program - Oak bodyguards - to assess the ability of European s...

Fig. S1 The proportion of nonAM root‐associated fungal classes within the roots of Plantago lanceolata. Fig. S2 Rarefaction curves for AM fungi in roots and root‐associated soil. Fig. S3 Connection diagram of sampled Plantago lanceolata individuals in the Åland Islands in the Baltic Sea, southwestern Finland. Fig. S4 Variation of abiotic and bio...

Plants are attacked by pathogens and herbivores with a wide range of lifestyles, both belowground and aboveground. These pathogens and herbivores often co-occur on the same host plant, even though one of them may be in the roots and the other in the shoots. It has long been known that pathogens and herbivores can affect each other when sharing the...

The spatial distribution and niche differentiation of three closely related species (Erysiphe alphitoides, Erysiphe quercicola and Erysiphe hypophylla) causing oak powdery mildew was studied at scales ranging from the European continent, where they are invasive, to a single leaf. While E. alphitoides was dominant at all scales, E. quercicola and E....

Systematic comparisons of species interactions in urban vs. rural environments can improve our understanding of shifts in ecological processes due to urbanization. However, such studies are relatively uncommon and the mechanisms driving urbanization effects on species interactions (e.g. between plants and insect herbivores) remain elusive. Here we...

Poster for Fernandez-Conradi et al. 2018 Ecology

Arbuscular mycorrhizal (AM) fungi form diverse communities and are known to influence above‐ground community dynamics and biodiversity. However, the multiscale patterns and drivers of AM fungal composition and diversity are still poorly understood. We sequenced DNA markers from roots and root‐associated soil from Plantago lanceolata plants collecte...