Antonio Profico

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Verified

Antonio verified their affiliation via an institutional email.

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• PhD
• Senior Researcher at University of Pisa

Objectives We present two new automatic tools, developed under the R environment, to reproduce the internal and external structures of bony elements. The first method, Computer‐Aided Laser Scanner Emulator (CA‐LSE), provides the reconstruction of the external portions of a 3D mesh by simulating the action of a laser scanner. The second method, Auto...

Many fossil specimens exhibit deformations caused by taphonomic processes. Due to these deformations, even important specimens have to be excluded from morphometric analyses, impoverishing an already poor paleontological record. Techniques to retrodeform and virtually restore damaged (i.e. deformed) specimens are available, but these methods genene...

Smoothing and decimation filters are commonly used to restore the realistic appearance of virtual biological specimens, but they can cause a loss of topological information of unknown extent. In this study, we analyzed the effect of smoothing and decimation on a 3D mesh to highlight the consequences of an inappropriate use of these filters. Topolog...

The evolutionary relationship between the base and face of the cranium is a major topic of interest in primatology. Such areas of the skull possibly respond to different selective pressures. Yet, they are often said to be tightly integrated. In this paper, we analyzed shape variability in the cranial base and the facial complex in Cercopithecoidea...

The Ceprano calvarium was discovered in fragments on March 1994 near the town of Ceprano in southern Latium (Italy), embedded in Middle Pleistocene layers. After reconstruction, its morphological features suggests that the specimen belongs to an archaic variant of H. heidelbergensis, representing a proxy for the last common ancestor of the divergin...

Cortical bone and dentine are two mineralized tissues sharing a common embryological origin, developmental, and genetic background, distinct from those of enamel. Understanding their relationship is crucial to decipher the factors acting on their postnatal development, and shedding light on the evolutionary patterns of tissue proportions. Here, we...

Although intense research effort is seeking to address which brain areas fire and connect to each other to produce complex behaviors in a few living primates, little is known about their evolution, and which brain areas or facets of cognition were favored by natural selection. By developing statistical tools to study the evolution of the brain cort...

Background There is a need for a new, less invasive surgical option for unicoronal synostosis (UCS). The aim of this study was to compare the resulting morphology and symmetry in patients with UCS following fronto-orbital distraction (FOD) or calvarial switch (CS). Methods 79 patients with isolated UCS operated between 2005 and 2021 were analyzed....

The study of evolutionary rates and patterns is the key to understand how natural selection shaped the current and past diversity of phenotypes. Phylogenetic comparative methods offer an array of solutions to undertake this challenging task, and help understanding phenotypic variation in full in most circumstances. However, complex, three-dimension...

Paper related to this abstract has been published, see: Liang et al. 2024. Functional adaptation of the infant craniofacial system to mechanical loadings arising from masticatory forces. Proc. R. Soc. B.29120240654 http://doi.org/10.1098/rspb.2024.0654

The so-called "Altamura Man" is a Neanderthal skeleton found in 1993 in the Lamalunga karstic system (southern Italy). The skeleton, dated between 172 and 130 ka, still lies deep within a spectacular cave setting, partly embedded within speleothems and extensively covered by coralloid concretions. These peculiar location and conditions would entail...

Our fundamental understanding of the physico-mechanical forces that drive the size and shape changes of the cranium during ontogeny are limited. Biomechanical models based on finite element method present a huge opportunity to address this critical gap in our knowledge. Here, we describe a validated computational framework to predict normal craniof...

The morphology and biomechanics of infant crania undergo significant changes between the pre- and post-weaning phases due to increasing loading of the masticatory system. The aims of this study were to characterize the changes in muscle forces, bite forces and the pattern of mechanical strain and stress arising from the aforementioned forces across...

It has been 150 years since the discovery of Oreopithecus bambolii Gervais, 1872, a Miocene primate that inhabited the Tusco-Sardinian archipelago around 8.3 to 6.7 million years ago. The most complete specimen of O. bambolii, known as "Sandrone" (IGF 11778), was found in a lignite mine in Baccinello (Grosseto, Italy). Despite its completeness and...

This poster was presented at the Craniofacial Morphogenesis and Tissue Regeneration Gordon Research Conferences, 26-31, May 2024, Barcelona, Spain.

The peopling of Europe during the Middle Pleistocene is a debated topic among paleoanthropologists. Some authors suggest the coexistence of multiple human lineages in this period, while others propose a single evolving lineage from Homo heidelbergensis to Homo neanderthalensis. The recent reassessment of the stratigraphy at the Sedia del Diavolo (S...

EVALUATION OF THIN PLATE SPLINE AND PARTIAL LEAST SQUARES METHODS FOR THE ESTIMATION OF MISSING STRUCTURES IN FOSSIL SPECIMENS

The study of sexual dimorphism in human crania has important applications in the fields of human evolution and human osteology. Current, the identification of sex from cranial morphology relies on manual visual inspection of identifiable anatomical features, which can lead to bias due to user’s expertise. We developed a landmark-based approach to a...

The study of the biological aspect of past populations is in constant development through the application and improvement of methodologies besides the discoveries of new (fossil) human remains. It is worth noticing that, in the last decades, technological advances and multidisciplinary approaches applied to biological anthropology have allowed us t...

Cortical bone and dentine share similarities in their embryological origin, development, and genetic background. Few analyses have combined the study of cortical bone and dentine to quantify their covariation relative to endogenous and exogenous factors. However, knowing how these tissues relate in individuals is of great importance to decipher the...

Flatfish (Pleuronectiformes) vertebrae are difficult to identify to species due to the lack of diagnostic features. This has resulted in a lack of understanding of the species abundances across archaeological sites, hindering interpretations of historical fisheries in the North Sea area. We use a new approach, utilising a combined 2D landmark-based...

Knowledge of human craniofacial growth (increase in size) and development (change in shape) is important in the clinical treatment of a range of conditions that affects it. This study uses an extensive collection of clinical CT scans to investigate craniofacial growth and development over the first 48 months of life, detail how the cranium changes...

1. Definitions of 88 anatomical landmarks; 2. Summary of linear and volume measurements based on the 217 skull models from newborn to 4 years; 3. Other supplementary information.

Here we report the reconstruction of the osteobiography of an adult male buried in the Longobard cemetery of Povegliano Veronese (Northern Italy, late 6th – early 8th century CE), who shows signs of interpersonal violence. The palaeopathological investigation reveals sharp force traumas on the body of the fourth lumbar vertebra and on two right rib...

Simple Summary Landmarks are commonly used to investigate how objects vary in form. However, many objects present few identifiable landmarks. To remedy this, several approaches have been developed to densely match points between surfaces lacking readily identifiable landmarks. These matched points are termed semilandmarks. The investigator has to m...

Complete Neanderthal skeletons are almost unique findings. A very well-preserved specimen of this kind was discovered in 1993 in the deepest recesses of a karstic system near the town of Altamura in Southern Italy. We present here a detailed description of the cranium, after we virtually extracted it from the surrounding stalagmites and stalactites...

The use of non-destructive approaches for digital acquisition (e.g. computerised tomography-CT) allows detailed qualitative and quantitative study of internal structures of skeletal material. Here, we present a new R-based software tool, Icex, applicable to the study of the sizes and shapes of skeletal cavities and fossae in 3D digital images. Trad...

Simple Summary This study extends previous work that examined the consequences of using different approaches to locating densely matched points (semilandmarks) over surfaces on subsequent estimates of their average shape and shape variation with size (allometric scaling). In that study, it was shown that different approaches yield different semilan...

There is controversy around the mechanisms that guided the change in brain shape during the evolution of modern humans. It has long been held that different cortical areas evolved independently from each other to develop their unique functional specializations. However, some recent studies suggest that high integration between different cortical ar...

Kolponomos newportensis is an enigmatic Miocene mammal allied to stem Pinnipedimorpha. It has been suggested that Kolponomos fed on hard-shelled benthic marine invertebrates by using its mandible as a wedge to dislodge its prey from the sea bottom by means of strong pull and torque forces. This unique feeding style was thought to originate from a s...

Endogenous ouabain (EO) is a steroid hormone secreted by the adrenal glands, usually associated with adverse cardiovascular effects. However, recent studies have highlighted its possible role in blood pressure control and in cardio-renal damage, and it seems to be involved in the adaptive response to hypoxia. The aim of this study is to detect the...

In two publications from 1967 and 1971, M. Masali described human skeletal remains presumed to have been found in the Balzi Rossi caves (Ventimiglia, Italy), based on a signed note dated to 1908. Since then, the remains - dubbed "Conio's Finds" and preserved at the University of Torino - had not been further studied. We performed a multidisciplinar...

The Fuegians, ancient inhabitants of Tierra del Fuego, are an exemplary case of a cold-adapted population, since they were capable of living in extreme climatic conditions without any adequate clothing. However, the mechanisms of their extraordinary resistance to cold remain enigmatic. Brown adipose tissue (BAT) plays a crucial role in this kind of...

Modern phylogenetic comparative methods allow us to estimate evolutionary rates of phenotypic change, how these rates differ across clades, and to assess whether the rates remained constant over time. Unfortunately, currently available phylogenetic comparative tools express the rate in terms of a scalar dimension, and do not allow us to determine r...

Fluctuating Asymmetry (FA) in morphology is used as a proxy for developmental instability in response to stress factors. FA has important implications for understanding the impact of differential environments and stressors on the skeletal phenotype. Here, we explore FA in the mandibular morphology of wild and captive Macaca fuscata to detect differ...

A recent protocol of digital restoration is applied to the Middle Pleistocene human cranium from Steinheim (Germany). The retrodeformation of the specimen sheds new light on the taphonomic origin of some peculiar features observed on the cranium and returned a morphology consistent with its attribution to the Neanderthal lineage.

In biological anthropology, parameters relating to cross-sectional geometry are calculated in paired long bones to evaluate the degree of lateralization of anatomy and, by inference, function. Here, we describe a novel approach, newly added to the morphomap R package, to assess the lateralization of the distribution of cortical bone along the entir...

The observation and the quantification of asymmetry in biological structures are deeply investigated in geometric morphometrics. Patterns of asymmetry were explored in both living and fossil species. In living organisms, levels of directional and fluctuating asymmetry are informative about developmental processes and health status of the individual...

A number of different approaches are currently available to digitally restore the symmetry of a specimen deformed by taphonomic processes. These tools include mirroring and retrodeformation to approximate the original shape of an object by symmetrisation. Retrodeformation has the potential to return a rather faithful representation of the original...

Studying the changes of shape is a common concern in many scientific fields. We address here two problems: (1) quantifying the deformation between two given shapes and (2) transporting this deformation to morph a third shape. These operations can be done with or without point correspondence, depending on the availability of a surface matching algor...

Fluctuating Asymmetry (FA) in morphology is used as a proxy for developmental instability in response to stress factors. FA has important implications for understanding the impact of differential environments and stressors on the skeletal phenotype. Here, we explore FA in the mandibular morphology of wild and captive Macaca fuscata to detect differ...

Objectives: Craniofacial morphology (CFM) is often used to address questions about the biological affinities of the earliest Americans, or Paleoindians, but resolution is complicated in part by a lack of well-preserved crania. The Wilson-Leonard 2 (WL-2) Paleoindian skull from Texas has never been fully analyzed because it is crushed and cannot be...

The fossil record from the Italian peninsula is of special interest for assessing the variability of pre-modern human populations (i.e., extinct humans non-belonging to the proper species Homo sapiens) and their evolutionary history. In 2005, a detailed “Catalogue of Italian Fossil Human Remains from the Palaeolithic to the Mesolithic” was publishe...

The fossil record from the Italian peninsula is of special interest for assessing the variability of pre-modern human populations (i.e., extinct humans non-belonging to the proper species Homo sapiens) and their evolutionary history. In 2005, a detailed "Catalogue of Italian Fossil Human Remains from the Palaeolithic to the Mesolithic" was publishe...

The pardel lynx, Lynx pardinus, is considered one of the most threatened living felids, currently distributed in restricted areas of the Iberian Peninsula. The evolutionary history of this medium-sized felid, as well as its relationships with the Middle-Late Pleistocene “cave lynx” from Mediterranean Europe, have fuelled a decades-long debate among...

Middle Pleistocene Homo in the Levant Our understanding of the origin, distribution, and evolution of early humans and their close relatives has been greatly refined by recent new information. Adding to this trend, Hershkovitz et al. have uncovered evidence of a previously unknown archaic Homo population, the “Nesher Ramla Homo ” (see the Perspecti...

Objectives The statistical analysis of fossil remains is essential to understand the evolution of the genus Homo. Unfortunately, the human fossil record is straight away scarce and plagued with severe loss of information caused by taphonomic processes. The recently developed field of Virtual Anthropology helps to ameliorate this situation by using...

[This corrects the article DOI: 10.1371/journal.pone.0226949.].

The Fuegians, extinct inhabitants of Tierra del Fuego, were an exemplary case of a cold-adapted population capable of living in extreme weather conditions without any adequate clothing, however the mechanisms of their extraordinary resistance to cold remain enigmatic. Brown adipose tissue (BAT) plays a crucial role in this kind of adaptation beside...

Morphological convergence can be assessed using a variety of statistical methods. None of the methods proposed to date enable the visualization of convergence. All are based on the assumption that the phenotypes either converge, or do not. However, between species, morphologically similar regions of a larger structure may behave differently. Previo...

The pardel lynx Lynx pardinus is today restricted to small populations living in southern Iberian Peninsula. However, this endangered species was widely spread throughout Iberia until historical times and is currently the subject of intense conservation programs. Paleontological data suggest that its past geographical range was much wider, includin...

Aging of the head and especially the face has been studied intensively, yet questions remain about the timing and rates of aging throughout adulthood and about the extent to which aging differs between men and women. Here we address these issues by developing statistical models of craniofacial aging to describe and compare aging through the life co...

KNM-OG 45500 is a hominin fossil composed of parts of a frontal bone, left temporal bone, and cranial vault pieces. Since its discovery along the Olorgesailie Formation (Kenya) in 2003, it has been associated with the Homo erectus hypodigm. The specimen, derived from a geological context dated to ca. 900 Ka BP, has been described as a very small in...

Background The range of normal variation of growth and development of the craniofacial region is of direct clinical interest but incompletely understood. Here we develop a statistical model of craniofacial growth and development to compare craniofacial ontogeny between age groups and sexes and pilot an approach to modeling that is relatively straig...

The Neanderthal specimen from Lamalunga Cave, near Altamura (Apulia, Italy), was discovered during a speleological survey in 1993. The specimen is one of the most complete fossil hominins in Europe and its state of preservation is exceptional, although it is stuck in calcareous concretions and the bones are mostly covered by calcite depositions. Ne...

At least six different Homo species populated the World during the latest Pliocene to the Pleistocene. The extinction of all but one of them is currently shrouded in mystery, and no consistent explanation has yet been advanced, despite the enormous importance of the matter. Here, we use a recently implemented past climate emulator and an extensive...

Objective Concha bullosa is a rather common condition of the nasal turbinates, rarely reported in archaeological skeletal collections. This paper examines a case of concha bullosa as seen in a female cranium from a burial in central Italy, dated to the Longobard domination in the Peninsula (mid-7th– early 8th century CE). Materials The individual u...

Homo sapiens is the only species alive able to take advantage of its cognitive abilities to inhabit almost all environments on Earth. Humans are able to culturally construct, rather than biologically inherit, their occupied climatic niche to a degree unparalleled within the animal kingdom. Precisely, when hominins acquired such an ability remains u...

Objectives: We analyzed the main anatomical traits found in the human frontal bone by using a geometric morphometric approach. The objectives of this study are to explore how the frontal bone morphology varies between the sexes and to detect which part of the frontal bone are sexually dimorphic. Materials and methods: The sample is composed of 1...

The inclusion of fossil phenotypes as ancestral character values at nodes in phylogenetic trees is known to increase both the power and reliability of phylogenetic comparative methods (PCMs) applications. We implemented the R function RRphylo as to integrate fossil phenotypic information as ancestral character values. We tested the new implementati...

Objectives This study describes and demonstrates the functionalities and application of a new R package, morphomap, designed to extract shape information as semilandmarks in multiple sections, build cortical thickness maps, and calculate biomechanical parameters on long bones. Methods morphomap creates, from a single input (an oriented 3D mesh rep...

Modern humans have larger and more globular brains when compared to other primates. Such anatomical features are further reflected in the possession of a moderately asymmetrical brain with the two hemispheres apparently rotated counterclockwise and slid anteroposteriorly on one another, in what is traditionally described as the Yakovlevian torque....

Large brains are a defining feature of primates, as is a clear allometric trend between body mass and brain size. However, important questions on the macroevolution of brain shape in primates remain unanswered. Here we address two: (i), does the relationship between the brain size and its shape follow allometric trends and (ii), is this relationshi...

The position (FMP) and orientation (FMO) of the foramen magnum have been used as proxies for locomotion and posture in extant and extinct primates. Several indices have been designed to quantify FMP and FMO but their application has led to conflicting results. Here, we test six widely used indices and two approaches (univariate and multivariate) fo...

Equus stenonis is one of the most prevalent European Pleistocene fossil horses. It is believed to be the possible ancestor of all Old World Early Pleistocene Equus, extant zebras and asses, and as such provides insights into Equus evolution and its biogeography and paleoecology. The Equus stenonis holotype skull (IGF560) was first described by Igin...

The phyletic relationship between Canis lupus and the Early-Middle Pleistocene Canis mosbachensis is widely accepted among scholars, although the taxonomy of several European fossil specimens is still debated. In the last decades, many studies focused on the evolution of Pleistocene wolves have been proposed considering new materials as well as spe...

The cross-sectional geometry of long bones is commonly used to infer their biomechanical properties in investigations of past and present primate locomotion as well as to assess intensity and repetitiveness of physical activities, and to estimate body mass. While cross-sectional geometry has proved to be very useful for reconstructing bone loading...

Morphological similarity between biological structures in phylogenetically distant species is usually regarded as evidence of convergent evolution. Yet, phenotypic similarity is not always a sign of natural selection acting on a particular trait, therefore adaptation to similar conditions may fail to generate convergent lineages. Herein we tested w...

In modern shape analysis, deformation is quantified in different ways depending on the algorithms used and on the scale at which it is evaluated. While global affine and non-affine deformation components can be decoupled and computed using a variety of methods, the very local deformation can be considered, infinitesimally, as an affine deformation....

Objectives: Reproducing cranial endocasts is a major goal of researchers interested in vertebrate brain evolution. We present a new R software, named endomaker, which allows the automatic extraction of endocasts from skull meshes along with the calculation of its volume. Materials and methods: We applied endomaker on non-primate and primate skulls...

In physical anthropology sexual dimorphism refers to the morphological differences observed in female and male individuals belonging to the same species. In the human cranium a number of anatomical traits are known to be sexual dimorphic. In this work, we present a geometric morphometric approach to automatically detect the most sexual dimorphic on...

Morphological convergence is an intensely studied macroevolutionary phenomenon. It refers to the morphological resemblance between phylogenetically distant taxa. Currently available methods to explore evolutionary convergence either: rely on the analysis of the phenotypic resemblance between sister clades as compared to their ancestor, fit differen...

Bones contain spaces within them. The extraction and the analysis of those cavities are crucial in the study of bone tissue function and can inform about pathologies or past traumatic events. The use of medical imaging techniques allows a non-invasive visualisation of skeletal cavities opening a new frontier in medical inspection and diagnosis. Her...

The geometric morphometric (GM) analysis of complex anatomical structures is an ever more powerful tool to study biological variability, adaptation and evolution. Here, we propose a new method (combinland), developed in R, meant to combine the morphological information contained in different landmark coordinate sets into a single dataset, under a G...

Extract cross sections from long bone meshes at specified intervals along the diaphysis. Calculate two and three-dimensional morphometric maps, cross-sectional geometric parameters, and semilandmarks on the periosteal and endosteal contours of each cross section. https://CRAN.R-project.org/package=morphomap