Andrew Adamatzky

Andrew Adamatzky
University of the West of England, Bristol | UWE Bristol · Department of Computer Science and Creative Technologies

About

824
Publications
213,322
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12,763
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Introduction
Andrew Adamatzky is a Head of Unconventional Computing Lab and Professor in Unconventional Computing, Department of Computer Science, University of the West of England, Bristol, UK. He does research in reaction-diffusion computing, cellular automata, physarum computing, massive parallel computation, applied mathematics, collective intelligence and robotics, bionics, nonlinear science, novel hardware, and future and emergent computation. He authored over seven books, including ‘Reaction-Diffusion Computers’, ‘Dynamics of Crowd Mind’ and ‘Physarum machines’ and edited over 25 research monographs; he is editor-in-chief of three peer-reviewed journals.
Additional affiliations
February 1997 - May 2016
University of the West of England, Bristol
Position
  • Professor
February 1997 - July 2016
University of the West of England, Bristol
Position
  • Professor (Full)

Publications

Publications (824)
Preprint
Full-text available
The work introduces a composite material that combines Kombucha cellulose mats with synthetic thermal proteinoids to create electroactive biofilms, capable for sensing and computation. The synthesis of proteinoids involves heating amino acid mixtures, which leads to the formation of proto–cell structures capable of biological electrical signalling....
Preprint
Regular light-dark cycles greatly affect organisms, and events like eclipses induce distinctive physiological and behavioural shifts. While well-documented in animals, plant behaviour during eclipses remains largely unexplored. Here we monitored multiple spruce trees to assess their individual and collective bioelectrical responses to a solar eclip...
Article
Full-text available
Proteinoids are thermal proteins which form microspheres in water in the presence of salt. Ensembles of proteinoid microspheres exhibit passive nonlinear electrical properties and active neuron-like spiking of electrical potential. We propose that various neuromorphic computing architectures can be prototyped from the proteinoid microspheres. A key...
Preprint
Full-text available
When studying the split-gill fungus Schizophyllum commune , we observed that the growing colonies displayed endogenous spikes of electrical potential similar to the action potentials of neurons. In order to investigate the impact of light on the electrical activities of these colonies, we exposed them to intermittent stimulation with cold light (58...
Article
Full-text available
Proteinoids are thermal proteins which swell into microspheres in aqueous solution. Ensembles of proteinoids produce electrical spiking activity similar to that of neurons. We introduce a novel method for implementing logical gates in the ensembles of proteinoid microspheres using chronoamperometry. Chronoamperometry is a technique that involves ap...
Article
Proteinoids, also known as thermal proteins, possess a fascinating ability to generate microspheres that exhibit electrical spikes resembling the action potentials of neurons. These spiking microspheres, referred to as protoneurons, hold the potential to assemble into proto-nanobrains. In our study, we investigate the feasibility of utilizing a pro...
Preprint
Full-text available
Advancements in mycelium technology, stemming from fungal electronics and the development of living mycelium composites and skins, have opened new avenues in the fusion of biological and artificial systems. This paper explores an experimental endeavour that successfully incorporates living, self-regenerating, and reactive Ganoderma sessile mycelium...
Article
Full-text available
The development of novel hardware computing systems and methods has been a topic of increased interest for researchers worldwide. New materials, devices, and architectures are being explored as a means to deliver more efficient solutions to contemporary issues. Along with the advancement of technology, there is a continuous increase in methods avai...
Article
Full-text available
Growing colonies of the split-gill fungus Schizophyllum commune show action potential-like spikes of extracellular electrical potential. We analysed several days of electrical activity recording of the fungus and discovered three families of oscillatory patterns. Very slow activity at a scale of hours, slow activity at a scale of 10 min and very fa...
Article
Proteinoids, or thermal proteins, are produced by heating amino acids to their melting point and initiating polymerisation to produce polymeric chains. In aqueous solutions proteinoids swell into hollow microspheres. These microspheres produce endogenous burst of electrical potential spikes and change patterns of their electrical activity in respon...
Preprint
Full-text available
Proteinoids, or thermal proteins, are aminoacid polymers formed at high temperatures by non-biological processes. Proteinoids form microspheres in liquids. The microspheres exhibit electrical activity similar to that of neurons. The electrically spiking microspheres are seen as proto-neurons capable of forming networks and carrying out information...
Preprint
Full-text available
We are studying the remarkable electrical properties of Proteinoids-ZnO microspheres with the aim of exploring their potential for a new form of computing. Our research has revealed that these microspheres exhibit behavior similar to neurons, generating electrical spikes that resemble action potentials. Through our investigations, we have studied t...
Preprint
Full-text available
Colloid-based computing devices offer remarkable fault tolerance and adaptability to varying environmental conditions due to their amorphous structure. An intriguing observation is that a colloidal suspension of ZnO nanoparticles in DMSO exhibits reconfiguration when exposed to electrical stimulation and produces spikes of electrical potential in r...
Article
Many organisms (including certain plant species) can be observed to emit sounds, potentially signifying threat alerts. Sensitivity to such sounds and vibrations may also play an important role in the lives of fungi. In this work, we explore the potential of ultrasound activity in dehydrating fungi, and discover that several species of fungi do not...
Article
Full-text available
Oscillation of physical parameters in materials can result in a peak signal in the frequency spectrum of the voltage measured from the materials. This spectrum and its amplitude/frequency tunability, through the application of bias voltage or current, can be used to perform neuron-like cognitive tasks. Magnetic materials, after achieving broad dist...
Article
Living fungal mycelium networks are proven to have properties of memristors, capacitors and various sensors. To further progress our designs in fungal electronics we need to evaluate how electrical signals can be propagated through mycelium networks. We investigate the ability of mycelium-bound composites to convey electrical signals, thereby enabl...
Article
Full-text available
Magnetic fluids are excellent candidates for several important research fields including energy harvesting, biomedical applications, soft robotics and exploration. However, notwithstanding relevant advancements such as shape reconfigurability, that have been demonstrated, there is no evidence for their computing capability, including the emulation...
Preprint
Growing colonies of the split-gill fungus Schizophyllum commune show action potential-like spikes of extracellular electrical potential. We analysed several days of electrical activity recording of the fungus and discovered three families of oscillatory patterns. Very slow activity at a scale of hours, slow activity at a scale of tens minutes and v...
Preprint
Full-text available
Living fungal mycelium networks are proven to have properties of memristors, capacitors and various sensors. To further progress our designs in fungal electronics we need to evaluate how electrical signals can be propagated through mycelium networks. We investigate the ability of mycelium-bound composites to convey electrical signals, thereby enabl...
Preprint
Full-text available
Growing colonies of the split-gill fungus Schizophyllum commune show action potential-like spikes of extracellular electrical potential. We analysed several days of electrical activity recording of the fungus and discovered three families of oscillatory patterns. Very slow activity at a scale of hours, slow activity at a scale of tens minutes and v...
Article
Full-text available
Mycelium-bound composites are potential alternatives to conventional materials for a variety of applications, including thermal and acoustic building panels and product packaging. If the reactions of live mycelium to environmental conditions and stimuli are taken into account, it is possible to create functioning fungal materials. Thus, active buil...
Article
Full-text available
Mycelium bound composites are promising materials for a diverse range of applications including wearables and building elements. Their functionality surpasses some of the capabilities of traditionally passive materials, such as synthetic fibres, reconstituted cellulose fibres and natural fibres. Thereby, creating novel propositions including augmen...
Article
Full-text available
The in situ measurement of the bioelectric potential in xilematic and floematic superior plants reveals valuable insights into the biological activity of these organisms, including their responses to lunar and solar cycles and collective behaviour. This paper reports on the “Cyberforest Experiment” conducted in the open-air Paneveggio forest in Val...
Preprint
Full-text available
A kombucha is a tea and sugar fermented by over sixty kinds of yeasts and bacteria. This symbiotic community produces kombucha mats, which are cellulose-based hydrogels. The kombucha mats can be used as an alternative to animal leather in industry and fashion once they have been dried and cured. Prior to this study, we demonstrated that living komb...
Preprint
Full-text available
A kombucha is a tea and sugar fermented by over sixty kinds of yeasts and bacteria. This symbiotic community produces kombucha mats, which are cellulose-based hydrogels. The kombucha mats can be used as an alternative to animal leather in industry and fashion once they have been dried and cured. Prior to this study, we demonstrated that living komb...
Preprint
Full-text available
Oscillation of physical parameters in materials can result in a peak signal in the frequency spectrum of the voltage measured from the materials. This spectrum and its amplitude/frequency tenability, through the application of bias voltage or current,can be used to perform neuron-like cognitive tasks. Magnetic materials, after achieving broad distr...
Chapter
We study a cellular automaton (CA) model of information dynamics on a single hypha of a fungal mycelium. Such a filament is divided in compartments (here also called cells) by septa. These septa are invaginations of the cell wall and their pores allow for flow of cytoplasm between compartments and hyphae. The septal pores of the fungal phylum of th...
Chapter
Fungal construction materials—substrates colonised by mycelium—are getting increased recognition as viable ecologically friendly alternatives to conventional building materials. A functionality of the constructions made from fungal materials would be enriched if blocks with living mycelium, known for their ability to respond to chemical, optical an...
Chapter
Mycelium bound composites are promising materials for a diverse range of applications including wearables and building elements. Their functionality surpasses some of the capabilities of traditionally passive materials, such as synthetic fibres, reconstituted cellulose fibres and natural fibres. Thereby, creating novel propositions including augmen...
Chapter
Smart wearables sense and process information from the user’s body and environment and report results of their analysis as electrical signals. Conventional electronic sensors and controllers are commonly, sometimes augmented by recent advances in soft electronics. Organic electronics and bioelectronics, especially with living substrates, offer a gr...
Chapter
We record extra-cellular electrical potential of fruit bodies of oyster fungi Pleurotus djamor. We demonstrated that the fungi generate action potential like impulses of electrical potential. Trains of the spikes are observed. Two types of spiking activity are selected: high-frequency (period 2.6 min) and low-freq (period 14 min); transitions betwe...
Chapter
A fungal colony maintains its integrity via flow of cytoplasm along mycelium network. This flow, together with possible coordination of mycelium tips propagation, is controlled by calcium waves and associated waves of electrical potential changes. We propose that these excitation waves can be employed to implement a computation in the mycelium netw...
Chapter
Hyphae within the mycelia of the ascomycetous fungi are compartmentalised by septa. Each septum has a pore that allows for inter-compartmental and inter-hyphal streaming of cytosol and even organelles. The compartments, however, have special organelles, Woronin bodies, that can plug the pores. When the pores are blocked, no flow of cytoplasm takes...
Chapter
Full-text available
Fungal organisms can perceive the outer world in a way similar to what animals sense. Does that mean that they have full awareness of their environment and themselves? Is a fungus a conscious entity? In laboratory experiments we found that fungi produce patterns of electrical activity, similar to neurons. There are low and high frequency oscillatio...
Chapter
We propose that fungi Basidiomycetes can be used as computing devices: information is represented by spikes of electrical activity, a computation is implemented in a mycelium network and an interface is realised via fruit bodies. In a series of scoping experiments we demonstrate that electrical activity recorded on fruits might act as a reliable in...
Chapter
Fungi exhibit action-potential like spiking activity. Up to date most electrical activity of oyster fungi has been characterised in sufficient detail. It remains unclear if there are any patterns of electrical activity specific only for a certain set of species or if all fungi share the same ‘language’ of electrical signalling. We use pairs of diff...
Chapter
Memristors close the loop for I-V characteristics of the traditional, passive, semi-conductor devices. A memristor is a physical realisation of the material implication and thus is a universal logical element. Memristors are getting particular interest in the field of bioelectronics. Electrical properties of living substrates are not binary and the...
Chapter
Cells in a fungal hyphae are separated by internal walls (septa). The septa have tiny pores that allow cytoplasm flowing between cells. Cells can close their septa blocking the flow if they are injured, preventing fluid loss from the rest of filament. This action is achieved by special organelles called Woronin bodies. Using the controllable pores...
Chapter
The emerging field of living technologies aims to create new functional hybrid materials in which living systems interface and interact with inanimate ones. Combining research into living technologies with emerging developments in computing architecture has enabled the generation of organic electronics from plants and slime mould. Here, we expand o...
Chapter
A fungal skin is a thin flexible sheet of a living homogeneous mycelium made by a filamentous fungus. The skin could be used in future living architectures of adaptive buildings and as a sensing living skin for soft self-growing/adaptive robots. In experimental laboratory studies we demonstrate that the fungal skin is capable for recognising mechan...
Chapter
Mycelium-bound composites consist of discrete substrate elements joined together by filamentous hypha strands. These composites can be moulded or extruded into custom components of desired shapes. When live fungi are present these composites exhibit electrical conductivity as well as memfractive and capacitive properties. These composites might be...
Chapter
We stimulate mycelian networks of oyster fungi Pleurotus ostreatus with low frequency sinusoidal electrical signals. We demonstrate that the fungal networks can discriminate between frequencies in a fuzzy-like or threshold based manner. Details about the mixing of frequencies by the mycelium networks are provided. The results advance the novel fiel...
Chapter
We study long-term electrical resistance dynamics in mycelium and fruit bodies of oyster fungi P. ostreatus. A nearly homogeneous sheet of mycelium on the surface of a growth substrate exhibits trains of resistance spikes. The average width of spikes is c. 23 min and the average amplitude is c. 1 k\(\Omega \). The distance between neighbouring spik...
Chapter
Mycelium networks are promising substrates for designing unconventional computing devices providing rich topologies and geometries where signals propagate and interact. Fulfilling our long-term objectives of prototyping electrical analog computers from living mycelium networks, including networks hybridised with nanoparticles, we explore the possib...
Chapter
The rapidly developing research field of organic analogue sensors aims to replace traditional semiconductors with naturally occurring materials. Photosensors, or photodetectors, change their electrical properties in response to the light levels they are exposed to. Organic photosensors can be functionalised to respond to specific wavelengths, from...
Chapter
Oyster fungi Pleurotus djamor generate action potential like spikes of electrical potential. The trains of spikes might manifest propagation of growing mycelium in a substrate, transportation of nutrients and metabolites and communication processes in the mycelium network. The spiking activity of the mycelium networks is highly variable compared to...
Chapter
Psilocybin fungi, aka “magic” mushrooms, are well known for inducing colourful and visionary states of mind. Such psychoactive properties and the ease of cultivating their basidiocarps within low-tech setups make psilocybin fungi promising pharmacological tools for mental health applications. Understanding of the intrinsic electrical patterns occur...
Chapter
Living substrates are capable for nontrivial mappings of electrical signals due to the substrate nonlinear electrical characteristics. This property can be used to realise Boolean functions. Input logical values are represented by amplitude or frequency of electrical stimuli. Output logical values are decoded from electrical responses of living sub...
Chapter
Electrical activity of fungus Pleurotus ostreatus is characterised by slow (hours) irregular waves of baseline potential drift and fast (minutes) action potential likes spikes of the electrical potential. An exposure of the mycelium colonised substrate to a chloroform vapour lead to several fold decrease of the baseline potential waves and increase...
Chapter
Fungi exhibit oscillations of extracellular electrical potential recorded via differential electrodes inserted into a substrate colonised by mycelium or directly into sporocarps. We analysed electrical activity of ghost fungi (Omphalotus nidiformis), Enoki fungi (Flammulina velutipes), split gill fungi (Schizophyllum commune) and caterpillar fungi...
Article
Full-text available
The living mycelium networks are capable of efficient sensorial fusion over very large areas and distributed decision making. The information processing in the mycelium networks is implemented via propagation of electrical and chemical signals en pair with morphological changes in the mycelium structure. These information processing mechanisms are...
Preprint
Full-text available
Magnetic fluids are excellent candidates for important research fields including energy harvesting, biomedical applications, soft robotics and exploration. However, notwithstanding relevant advancements such as shape reconfigurability, that have been demonstrated, there is no evidence for their computation capability, including the emulation of syn...
Preprint
Full-text available
Pavlovian reflex is an essential mechanism of nervous systems of living beings which allows them to learn. Liquid colloid computing devices offer a high degree of fault-tolerance, reconfigurability and plasticity. As a first step towards designing and prototyping colloidal neuromorphic computing systems we decided to evaluate if it is possible to i...
Article
We stimulate mycelian networks of oyster fungi Pleurotus ostreatus with low frequency sinusoidal electrical signals. We demonstrate that the fungal networks can discriminate between frequencies in a fuzzy or threshold based manner. Details about the mixing of frequencies by the mycelium networks are provided. The results advance the novel field of...
Preprint
Colloids submitted to electrical stimuli exhibit a reconfiguration that could be used to store information and, potentially, compute. We investigated learnign, memorization, and time and stimulation's voltage dependence of conductive network formation in a colloidal suspension of ZnO nanoparticles in DMSO. Relations between critical resistance and...
Preprint
Full-text available
Cells in a fungal hyphae are separated by internal walls (septa). The septa have tiny pores that allow cytoplasm flowing between cells. Cells can close their septa blocking the flow if they are injured, preventing fluid loss from the rest of filament. This action is achieved by special organelles called Woronin bodies. Using the controllable pores...
Article
Full-text available
Psilocybin fungi, aka “magic” mushrooms, are well known for inducing colorful and visionary states of mind. Such psychoactive properties and the ease of cultivating their basidiocarps within low-tech setups make psilocybin fungi promising pharmacological tools for mental health applications. Understanding of the intrinsic electrical patterns occurr...
Preprint
We stimulate mycelian networks of oyster fungi Pleurotus ostreatus with low frequency sinusoidal electrical signals. We demonstrate that the fungal networks can discriminate between frequencies in a fuzzy or threshold based manner. Details about the mixing of frequencies by the mycelium networks are provided. The results advance the novel field of...
Preprint
Full-text available
Mycelium bound composites are promising materials for a diverse range of applications including wearables and building elements. Their functionality surpasses some of the capabilities of traditionally passive materials, such as synthetic fibres, reconstituted cellulose fibres and natural fibres. Thereby, creating novel propositions including augmen...
Article
Full-text available
Living substrates are capable for nontrivial mappings of electrical signals due to the substrate nonlinear electrical characteristics. This property can be used to realise Boolean functions. Input logical values are represented by amplitude or frequency of electrical stimuli. Output logical values are decoded from electrical responses of living sub...
Article
Full-text available
Trees employ impulses of electrical activity to coordinate actions of their bodies and long-distance communication. There are indications that the vascular system might act as a network of pathways for traveling electrical impulses. A question arises about the correlation and interplay between the molecular (microscopic) level and the macroscopic o...
Chapter
This paper uses a recent explanation for the fundamental haploid-diploid lifecycle of eukaryotic organisms to present a new evolutionary algorithm that differs from all previous known work using diploid representations. A form of the Baldwin effect has been identified as inherent to the evolutionary mechanisms of eukaryotes and a simplified version...
Article
Advances in flexible electronic devices and robotic software require that sensors and controllers be virtually devoid of traditional electronic components, be deformable and stretch‐resistant. Liquid electronic devices that mimic biological synapses would make an ideal core component for flexible liquid circuits. This is due to their unbeatable fea...
Preprint
Full-text available
Psilocybin fungi, aka "magic" mushrooms, are well known for inducing colourful and visionary states of mind. Such psychoactive properties and the ease of cultivating their basidiocarps within low-tech setups make psilocybin fungi promising pharmacological tools for mental health applications. Understanding of the intrinsic electrical patterns occur...
Article
Full-text available
Unconventional and, specifically, wave computing has been repeatedly studied in laboratory based experiments by utilizing chemical systems like a thin film of Belousov–Zhabotinsky (BZ) reactions. Nonetheless, the principles demonstrated by this chemical computer were mimicked by mathematical models to enhance the understanding of these systems and...
Preprint
Full-text available
Advances in flexible electronic devices and robotic software require that sensors and controllers be virtually devoid of traditional electronic components, be deformable and stretch resistant. Liquid electronic devices that mimic biological synapses would make an ideal core component for flexible liquid circuits. This is due to their unbeatable fea...
Article
Full-text available
A reactive bacterial glove is a cotton glove colonised by Acetobacter aceti, an example of biofabrication of a living electronic sensing device. The bacterial colony, supported by a cellulose-based hydrogel, forms a several millimetres-thick living coating on the surface of the glove. This paper proposes a novel method for analysing the complex ele...
Preprint
Electrical activity is used by plants in long term signalling and information transfer between the distant parts of the plant. Biopotential recordings from trees in a natural environment have been so far less discussed in scientific literature. Here we present our data about the open science experiment TRee-hUMAn iNterface (TRUMAN) located in Panev...
Article
Full-text available
Fungi exhibit oscillations of extracellular electrical potential recorded via differential electrodes inserted into a substrate colonized by mycelium or directly into sporocarps. We analysed electrical activity of ghost fungi ( Omphalotus nidiformis ), Enoki fungi ( Flammulina velutipes ), split gill fungi ( Schizophyllum commune ) and caterpillar...
Preprint
Full-text available
Fungal organisms can perceive the outer world in a way similar to what animals sense. Does that mean that they have full awareness of their environment and themselves? Is a fungus a conscious entity? In laboratory experiments we found that fungi produce patterns of electrical activity, similar to neurons. There are low and high frequency oscillatio...
Preprint
Full-text available
Electrical activity is used by plants in long term signalling and information transfer between the distant parts of the plant. Biopotential recordings from trees in a natural environment have been so far less discussed in scientific literature. Here we present our data about the open science experiment TRee-hUMAn iNterface (TRUMAN) located in Panev...
Article
The use of live organisms in electrically-coupled sensing devices has been suggested as an alternative low-cost, low-environmental footprint and robust technology for continuous monitoring and sensing applications. The utility of Chlorella vulgaris algae as living biosensor media inside liquid marbles (LMs), micro-wells and surface recesses is here...