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132
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August 2015 - February 2017
October 2008 - March 2013
Publications
Publications (132)
New approaches to abundance surveying utilizing unoccupied aerial vehicles (UAVs) are proving to be effective tools in marine and terrestrial environments. We explored UAV efficacy for surveys in the Galapagos Marine Reserve (GMR), where relative abundance patterns of juvenile sharks and subsequent classifications of putative nursery areas based on...
Climate change is an environmental emergency threatening species and ecosystems globally. Oceans have absorbed about 90% of anthropogenic heat and 20%–30% of the carbon emissions, resulting in ocean warming, acidification, deoxygenation, changes in ocean stratification and nutrient availability, and more severe extreme events. Given predictions of...
The waters around the Galápagos Marine Reserve (GMR) are important fishing grounds for authorized artisanal vessels fishing within the reserve as well as for national and foreign industrial fleets operating in the wider Ecuadorian Insular Exclusive Economic Zone (IEEZ). Although it was not originally designed for fisheries management, Automatic Ide...
Animal body-size variation influences multiple processes in marine ecosystems, but habitat heterogeneity has prevented a comprehensive assessment of size across pelagic (midwater) and benthic (seabed) systems along anthropic gradients. In this work, we derive fish size indicators from 17,411 stereo baited-video deployments to test for differences b...
Examining fishing pressure in under-resourced marine regions still presents a challenge to understanding patterns of fishing pressure. These issues are compounded in areas with complex marine zoning regulations or those that have changed over time. Satellite-based positioning tracking of fishing vessels has helped identify ocean-wide fishing effort...
Tropical pelagic predators are exploited by fisheries and their movements are influenced by factors including prey availability, temperature, and dissolved oxygen levels. As the biophysical parameters vary greatly within the range of circumtropical species, local studies are needed to define those species' habitat preference and model possible beha...
The Eastern Tropical Pacific (ETP) is one of the last regions where large aggregations of the critically endangered scalloped hammerhead shark (Sphyrna lewini) can still be observed. In this regard, we comparatively assessed the seasonality in S. lewini’s relative abundance within three marine protected areas (MPAs) of the ETP and explored its rela...
This document summarizes the current conservation status of the scalloped hammerhead shark (Sphyrna lewini) in the Eastern Tropical Pacific (ETP), including knowledge gaps and conservation priorities. We used a semi-systematic literature review to compile and classify a total of 166 documents (i.e., scientific articles and grey literature) regardin...
We report on a non-invasive technique for observing the reproductive states of wild, free-swimming whale sharks Rhincodon typus for the first time. Female whale sharks (n = 22) were assessed using underwater ultrasonography and a novel blood-sampling technique at Darwin Island in the Galapagos Marine Reserve, Ecuador. Despite the widely held assump...
Whale sharks Rhincodon typus frequently appear to interact or associate with other species, which vary depending on the community structure and the demographic of the whale sharks at each location globally. Here, we present the species sighted frequently around whale sharks in the Galapagos Archipelago and reported by dive guides and scientists and...
Human exploitation has profoundly depleted animal populations in the ocean, leading to declines in ecosystem productivity, resilience, and contributions to people 1,2 . However, it remains unclear how size structure of fish populations varies across marine habitat and levels of human exploitation while simultaneously underpinning food web architect...
Whale sharks ( Rhincodon typus ) frequently appear to interact or associate with other species, which vary depending on the community structure and the demographic of the whale sharks at each location globally. Here, we present the species sighted frequently around whale sharks in the Galapagos Archipelago, and reported by dive guides and scientist...
Knowledge of the three-dimensional movement patterns of elasmobranchs is vital to understand their ecological roles and exposure to anthropogenic pressures. To date, comparative studies among species at global scales have mostly focused on horizontal movements. Our study addresses the knowledge gap of vertical movements by compiling the first globa...
The world’s largest extant fish, the whale shark Rhincodon typus, is one of the most-studied species of sharks globally. The discovery of predictable aggregation sites where these animals gather seasonally or are sighted year-round – most of which are coastal and juvenile-dominated – has allowed for a rapid expansion of research on this species. Th...
Variability and climate change due to anthropic influence have brought about alterations to marine ecosystems, that, in turn, have affected the physiology and metabolism of ectotherm species, such as the common hammerhead shark (Sphyrna lewini). However, the impact that climate variability may have on this species’ distribution, particularly in the...
Significance
Global vessel traffic is increasing alongside world economic growth. The potential for rising lethal ship strikes on endangered species of marine megafauna, such as the plankton-feeding whale shark, remains poorly understood since areas of highest overlap are seldom determined across an entire species range. Here we show how satellite...
Sphyrna lewini is a viviparous shark that pups in shallow coastal waters. Given dramatic declines in the S. lewini Eastern Pacific population, it is essential to identify nursery grounds that could potentially increase the resilience of adult populations. Here, we provide evidence of a putative nursery ground for S. lewini at an oceanic island in t...
We present a compilation of published telemetric results, complemented by the addition of new results where necessary, to justify the expansion of the marine protected areas in the Eastern Pacific. In addition, we furnish evidence that fishing effort by commercial vessels, carrying position-monitoring, satellite-communicating radio beacons, has dim...
Understanding the link between seamounts and large pelagic species (LPS) may provide important insights for the conservation of these species in open water ecosystems. The seamounts along the Cocos Ridge in the Eastern Tropical Pacific (ETP) ocean are thought to be ecologically important aggregation sites for LPS when moving between Cocos Island (C...
No-take marine protected areas (MPAs) can provide spatial refuge for species throughout all or part of their life-cycles. Cabo Pulmo National Park (CPNP) is a no-take MPA located on the south-east coast of the Baja California Peninsula, Mexico, where there has been an increase in the abundance and diversity of elasmobranch species since its closure...
Cabo Pulmo National Park was established in 1995 and has since seen a large increase in fish biomass. An unoccupied aerial vehicle (UAV) was used to survey shallow coastal habitat in which lemon sharks (Negaprion brevirostris), bull sharks (Carcharhinus leucas) and Pacific nurse sharks (Ginglymostoma unami) were recorded. Sharks were more common in...
Shark fishing, driven by the fin trade, is the primary cause of global shark population declines. Here, we present a case study that exemplifies how industrial fisheries are likely depleting shark populations in the Eastern Tropical Pacific Ocean. In August 2017, the vessel Fu Yuan Yu Leng 999, of Chinese flag, was detained while crossing through t...
106,107 ✉ replying to A. V. Harry & J. M. Braccini Nature https://doi.org/10.1038/s41586-021-03463-w (2021) Our global analysis 1 estimated the overlap and fishing exposure risk (FEI) using the space use of satellite-tracked sharks and longline fishing effort monitored by the automatic identification system (AIS). In the accompanying Comment, Harry...
This article is a response to Murua et al.'s Matters Arising article in Nature, "Shark mortality cannot be assessed by fishery overlap alone," which arose from arising from N. Queiroz et al. Nature https://doi.org/10.1038/s41586-019-1444-4 (2019).
In this paper, we propose a new automated method based on deep convolutional neural networks to detect and track critically endangered hammerhead sharks in video sequences. The proposed method improved the standard YOLOv3 deep architecture by adding 18 more layers (16 convolutional and 2 Yolo layers), which increased the model performance in detect...
Understanding the link between seamounts and large pelagic species (LPS) is critical for guiding management and conservation efforts in open water ecosystems. The seamounts along the Cocos Ridge in the Eastern Tropical Pacific (ETP) are thought to play a critical role for LPS moving between Cocos Island (Costa Rica) and Galapagos Islands (Ecuador)....
Spatial management through the implementation of marine protected areas is one strategy to limit the extraction of sensitive marine species. Understanding the area used by marine life is thus a key step towards the evaluation of the management framework and efficacy of a protected area. To provide information of the protective coverage of the Galap...
Effective ocean management and the conservation of highly migratory species depend on resolving the overlap between
animal movements and distributions, and fishing effort. However, this information is lacking at a global scale. Here we
show, using a big-data approach that combines satellite-tracked movements of pelagic sharks and global fishing fle...
There is a great need to understand how resource interactions alter the functioning of ecosystems, where the selective elimination of pelagic fishes can lead to changes in food web structure. This work analyzes the trophic niches of three species of commercial importance in the Galapagos Marine Reserve, yellowfin tuna, Thunnus albacares (TA), skipj...
Marine animal tracking has become one of the major tools used to understand the behavior and ecology of a multitude of species in the ocean, thus there is an increasing body of knowledge about this subject worldwide, particularly for sharks. Nevertheless, little was known of the movement patterns of shark in the Mexican Pacific (MXP) and Gulf of Ca...
A series of habitat suitability models were created based upon 2-dimensional tracking of Green Sturgeon and hydraulic simulations. This is an effort to better understand the relationship between the population decline, habitat suitability, and knowledge of the remaining post-dam era habitat available to Green Sturgeon. Records of the movements of G...
ABSTRACT. Association of sharks with Las Gemelas Seamount and first evidence of connectivity with Cocos Island, Pacific of Costa Rica. Introduction: Seamounts and oceanic islands are known as hotspots of pelagic biodiversity, which highly migratory species use as natural biological corridors. Although marine protected areas have been established in...
Sporadic aggregations of decapod crustaceans can occur for various reasons and in some cases their drivers are poorly understood. Objective: Here, we present our observations of an apparently rare massive aggregation of pelagic swimming crabs, Euphylax dovi. Methods: During a research cruise at Cocos Island (5°32’34” N, 87°05’06” W), we encountered...
Long-distance movements of sharks within and between islands pose substantial challenges for resource managers working with highly migratory species. When no-take zones do not cover the critical areas that sharks use as part of their lifecycle, exposure to fishing activities can be significant. Shark movements between the Marine Protected Areas (MP...
This study is the first description of the residency and diel movements of Sphyrna lewini at the Revillagigedo National Park, Mexico. Eleven adult scalloped hammerheads of total length 200–300 cm were monitored using acoustic telemetry during 2013–2015 at four sites at San Benedicto Island. Diel and residency patterns were described based on 58,055...
Effective ocean management and the conservation of highly migratory species depend on resolving the overlap between animal movements and distributions, and fishing effort. However, this information is lacking at a global scale. Here we show, using a big-data approach that combines satellite-tracked movements of pelagic sharks and global fishing fle...
Many species of sharks form aggregations around oceanic islands, yet their levels of residency and their site specificity around these islands may vary. In some cases, the waters around oceanic islands have been designated as marine protected areas, yet the conservation value for threatened shark species will depend greatly on how much time they sp...
We used acoustic telemetry to determine the spatial and temporal overlap between adult Green Sturgeon movements and areas affected by dredging within the San Francisco Estuary. Autonomous receivers were deployed for 3 years within the lower Estuary at priority locations to assess the potential for adverse effects on Green Sturgeon. Green Sturgeon w...
Abstract Whale sharks (Rinchodon typus) are found in shallow coastal and deep waters of tropical and warm temperate seas. Population genetic studies indicate high connectivity among populations, and an Indo-Pacific meta-population has been suggested with potential migrations among some ocean basins. Here, we present the satellite track of a trans-P...
[This corrects the article DOI: 10.1371/journal.pone.0182599.].
The whale shark is an ideal flagship species for citizen science projects because of its charismatic nature, its size, and the associated ecotourism ventures focusing on the species at numerous coastal aggregation sites. An online database of whale shark encounters, identifying individuals on the basis of their unique skin patterning, captured almo...
The conservation benefits of the Galapagos Marine Reserve (GMR), created in March 1998, have been consistently proved for endemic species and populations with limited movements. Yet, to date, no study has explored its effects on highly-migratory pelagic species, such as tuna. To this end, the impact of the GMR on the behavior and productivity of tu...
In this commentary, we describe how geomagnetic intensity can be used to estimate latitude, discuss its strengths and weaknesses, and argue for its potential use along with irradiance measurements for estimating the latitude of a migratory fish carrying an archival tag. We conclude this commentary by suggesting that researchers and tag manu-facture...
Satellite tracking of 27 whale sharks in the eastern tropical Pacific, examined in relation to environmental data, indicates preferential occupancy of thermo-biological frontal systems. In these systems, thermal gradients are caused by wind-forced circulation and mixing, and biological gradients are caused by associated nutrient enrichment and enha...
The potential effectiveness of marine protected areas (MPAs) as a conservation tool for large sharks has been questioned due to the limited spatial extent of most MPAs in contrast to the complex life history and high mobility of many sharks. Here we evaluated the movement dynamics of a highly migratory apex predatory shark (tiger shark Galeocerdo c...
Map showing the study sites of (a) Bachas-Salinas, and (b) Isabela-South and Cerro-Ballena. White sea turtle icons indicate the most important nesting beaches for green sea turtles in the area, according to Zárate and Dutton [40] and Zárate et al. [34]. Black crosses show the locations of SBRUV deployments, and black rectangles show the locations o...
Frequency distribution of the time interval (in days) between subsequent detections of satellite locations obtained for tagged sharks.
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Chronology of acoustic detections for each of the acoustic-tagged sharks (TS1-TS20) by site (colour coded).
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Total number of sharks recorded in the study.
Sharks observed in each season, of each size class, and of each sex, at each location (the numbers observed by stereo-BRUVs and by capture are given in parentheses, respectively). Sampling effort was not quantified for captures. For stereo-BRUVs, effort varied among locations but was equal between seaso...
Acoustic detections of the sharks tagged with acoustic devices in the four VR2W receivers deployed at the study locations.
(CSV)
Satellite positions of the sharks tagged with satellite devices.
(CSV)
Stereo-BRUVs data for the study locations.
(CSV)
Vast sections of the Sacramento River have been listed as critical habitat by the National Marine Fisheries Service for green sturgeon spawning (Acipenser medirostris), yet spawning is known to occur at only a few specific locations. This study reveals the range of physical habitat variables selected by adult green sturgeon during their spawning pe...
Ocean sunfishes, with their peculiar morphology, large size, and surface habits, are valuable assets in ecotourism destinations worldwide. This study investigates site fidelity and long-range movements of short ocean sunfish, Mola ramsayi (Giglioli 1883), at Punta Vicente Roca (PVR) off Isabela Island in the Galapagos Islands. Five individuals were...
The Eastern Tropical Pacific is rich with ocean predators such as large schools of scalloped hammerhead sharks. This ocean region, which stretches down the Pacific Coast from the Gulf of California to Ecuador, is known as a treasure trove of wonders by divers, wildlife enthusiasts, and eco-adventurers. It is home to a host of endemic, native and mi...
Most previous studies on whale shark movements have been on immature sharks. Here, we present tracking data for large females that we tagged at the Galapagos Islands, where they occur seasonally. We conducted fieldwork at Darwin Island (1.67, 92.0°W) from July to October in 2011 and in 2012. We often saw individual sharks several times on a particu...
Background Gathering data on the life of enigmatic animals remains a challenge, despite its important role in biodiversity conservation and management. For many species, biogeographic investigations are largely th