Alejandro Cuetos

Alejandro Cuetos
Universidad Pablo de Olavide | UPO · Department of Physical, Chemical and Natural Systems

PhD

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81
Publications
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1,275
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Publications

Publications (81)
Preprint
Discotic colloids give rise to a paradigmatic family of liquid crystals with sound applications in Materials Science. In this paper, Monte Carlo simulations are employed to characterize the low-temperature liquid crystal phase diagram and the vapour-liquid coexistence of discotic colloids interacting via a Kihara potential. Discoidal particles with...
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Here, employing computer simulation tools, we present a study on the development of a bacterial biofilm from a single starter cell on a flat inert surface overlaid by an aqueous solution containing nutrients. In our simulations, surface colonization involves an initial stage of two-dimensional cell proliferation to eventually transition to three-di...
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This study uses a coarse-grained Monte Carlo algorithm to model and simulate the coadsorption of a binary mixture of counterionic colloids in Gibbs monolayers. These monolayers form at a idealized air-water interface, with one non-soluble species confined at the interface and the second one partially soluble in the aqueous phase. The investigation...
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The rheology of colloidal suspensions is of utmost importance in a wide variety of interdisciplinary applications in formulation technology, determining equally interesting questions in fundamental science. This is especially intriguing when colloids exhibit a degree of long-range positional or orientational ordering, as in liquid crystals (LCs) of...
Article
Bacterial growth and division generally occur by the process known as binary fission, in which the cells grow polarly until they divide into two daughter cells. Although this process is affected by factors that introduce stochastic variability in both growth rate and daughter cell length, the fact is that the size distribution in growing bacteria r...
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Biaxial nematic ($N_B$) liquid crystals have been indicated as promising candidates for the design of next-generation displays with novel electro-optical properties and faster switching times. While at the molecular scale their existence is still under debate, experimental evidence, supported by theory and simulation, has unambiguously proved that...
Article
Biaxial nematic (NB) liquid crystals have been indicated as promising candidates for the design of next-generation displays with novel electro-optical properties and faster switching times. While at the molecular scale their existence is still under debate, experimental evidence, supported by theory and simulation, has unambiguously proved that sui...
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Particle tracking in soft materials allows one to characterise the material’s local viscoelastic response, a technique referred to as microrheology (MR). In particular, MR can be especially powerful to ponder the impact of structural ordering on the tracer’s transport mechanism and thus disclose intriguing elements that cannot be observed in isotro...
Preprint
Bacterial growth and division generally occur by the process known as binary fission, in which the cells grow polarly until they divide into two daughter cells. Although this process is affected by factors that introduce stochastic variability in both growth rate and daughter cell length, the fact is that the size distribution in bacterial communit...
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Full-text available
The computational modelling of discotic molecules is a central topic in colloid science that is key for the smart design of a broad range of modern functional materials. This work lays out a versatile interaction model capable of exposing the rich mesogenic behaviour of discotics. A single coarse-grained spheroplatelet core framework is employed to...
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Understanding how colloidal suspensions behave in confined environments has a striking relevance in practical applications. Despite the fact that the behavior of colloids in the bulk is key to identifying the main elements affecting their equilibrium and dynamics, it is only by studying their response under confinement that one can ponder the use o...
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Full-text available
Understanding how colloidal suspensions behave in confined environments has a striking relevance in practical applications. Despite the fact that the behaviour of colloids in the bulk is key to identify the main elements affecting their equilibrium and dynamics, it is only by studying their response under confinement that one can ponder the use of...
Preprint
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Understanding the rheology of colloidal suspensions is crucial in the formulation of a wide selection of industry-relevant products. To characterise the viscoelastic behaviour of these soft materials, one can analyse the microscopic dynamics of colloidal tracers diffusing through the host fluid and generating local deformations and stresses. This t...
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The size of organs is critical for their function and often a defining trait of a species. Still, how organs reach a species-specific size or how this size varies during evolution are problems not yet solved. Here, we have investigated the conditions that ensure growth termination, variation of final size and the stability of the process for develo...
Article
Understanding the rheology of colloidal suspensions is crucial in the formulation of a wide selection of industry-relevant products, such as paints, foods and inks. To characterise the viscoelastic behaviour of these soft materials, one can analyse the microscopic dynamics of colloidal tracers diffusing through the host fluid and generating local d...
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Field-induced reorientation of colloidal particles is especially relevant to manipulate the optical properties of a nanomaterial for targetapplications. We have recently shown that surprisingly feeble external stimuli are able to transform uniaxial nematic liquid crystals (LCs) ofcuboidal particles into biaxial nematic LCs. In light of these result...
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Full-text available
Field-induced reorientation of colloidal particles is especially relevant to manipulate the optical properties of a nanomaterial for target applications. We have recently shown that surprisingly feeble external stimuli are able to transform uniaxial nematic liquid crystals (LCs) of cuboidal particles into biaxial nematic LCs. In the light of these...
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Microscopic organisms, such as bacteria, have the ability of colonizing surfaces and developing biofilms that can determine diseases and infections. Most bacteria secrete a significant amount of extracellular polymer substances that are relevant for biofilm stabilization and growth. In this work, we apply computer simulation and perform experiments...
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Microscopic organisms, such as bacteria, have the ability of colonizing surfaces and developing biofilms that can determine diseases and infections. Most bacteria secrete a significant amount of extracellular polymer substances that are relevant for biofilm stabilization and growth. In this work, we apply computer simulation and perform experiments...
Article
The dynamic Monte Carlo (DMC) method is an established molecular simulation technique for the analysis of the dynamics in colloidal suspensions. An excellent alternative to Brownian dynamics or molecular dynamics simulation, DMC is applicable to systems of spherical and/or anisotropic particles and to equilibrium or out-of-equilibrium processes. In...
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Correction for ‘Directional-dependent pockets drive columnar–columnar coexistence’ by Álvaro González García et al. , Soft Matter , 2020, DOI: 10.1039/d0sm00802h.
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The rational design of materials requires a fundamental understanding of the mechanisms driving their self-assembly. This may be particularly challenging in highly dense and shape-asymmetric systems. Here we show how the addition of tiny non-adsorbing spheres (depletants) to a dense system of hard disc-like particles (discotics) leads to coexistenc...
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Colloidal cuboids have the potential to self-assemble into biaxial liquid crystal phases, which exhibit two independent optical axes. Over the last few decades, several theoretical works have predicted the existence of a wide region of the phase diagram where the biaxial nematic phase would be stable, but imposed rather strong constraints on the pa...
Preprint
Full-text available
The Dynamic Monte Carlo (DMC) method is an established molecular simulation technique for the analysis of the dynamics in colloidal suspensions. An excellent alternative to Brownian Dynamics or Molecular Dynamics simulation, DMC is applicable to systems of spherical and/or anisotropic particles and to equilibrium or out-of-equilibrium processes. In...
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Full-text available
We perform dynamic Monte Carlo simulations to investigate the equilibrium dynamics of hard board-like colloidal particles in oblate and prolate nematic liquid crystals. In particular, we characterize the particles' diffusion along the nematic director and perpendicularly to it, and observe a structural relaxation decay that strongly depends on the...
Preprint
Full-text available
Colloidal cuboids have the potential to self-assemble into biaxial liquid crystal phases, which exhibit two independent optical axes. Over the last few decades, several theoretical works predicted the existence of a wide region of the phase diagram where the biaxial nematic phase would be stable, but imposed rather strong constraints on the particl...
Preprint
Full-text available
We perform Dynamic Monte Carlo simulations to investigate the equilibrium dynamics of hard colloidal cuboids in oblate and prolate nematic liquid crystals. In particular, we characterise the particles' diffusion along the nematic director and perpendicularly to it, and observe a structural relaxation decay that strongly depend on the particle aniso...
Article
Monolayers of oppositely charged colloids conform versatile self-organizing substrates, with a recognized potential to taylor functional interfaces. In this study, a coarse-grained Monte Carlo simulation approach is laid out to assess the structural properties of Gibbs monolayers, in which one of the counter-ionic species is partially soluble. It i...
Article
It is well known that understanding the transport properties of liquid crystals is crucial to optimize their performance in a number of technological applications. In this work, we analyze the effect of shape anisotropy on the diffusion of rodlike and disklike particles by Brownian dynamics simulations. To this end, we compare the dynamics of prola...
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Full-text available
By computer simulation, we model the phase behaviour of colloidal suspensions of board-like particles under the effect of an external field and assess the still disputed occurrence of the biaxial nematic (NB) liquid crystal phase. The external field promotes the rearrangement of the initial isotropic (I) or uniaxial nematic (NU) phase and the forma...
Preprint
Full-text available
It is well known that understanding the transport properties of liquid crystals (LCs) is crucial to optimise their performance in a number of technological applications. In this work, we analyse the effect of shape anisotropy on the diffusion of rod-like and disk-like particles by Brownian dynamics simulations. To this end, we compare the dynamics...
Preprint
Full-text available
We investigate the phase behavior of colloidal suspensions of board-like particles under the effect of an external field and assess the still disputed occurrence of the biaxial nematic (N$_\text{B}$) liquid crystal phase. The external field promotes the rearrangement of the initial isotropic (I) or uniaxial nematic (N$_\text{U}$) phase and the form...
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Full-text available
Recent studies unveiled the Fickian yet non-Gaussian (FNG) dynamics of many soft matter systems and suggested this phenomenon as a general characteristic of the diffusion in complex fluids. In particular, it was shown that the distribution of particle displacements in Fickian diffusion is not necessarily Gaussian, and thus the Einstein and Smolucho...
Preprint
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Recent studies unveiled the Fickian yet non-Gaussian (FNG) dynamics of many soft matter systems and suggested this phenomenon as a general characteristic of the diffusion in complex fluids. In particular, it was shown that the distribution of particle displacements in Fickian diffusion is not necessarily Gaussian, and thus the Einstein and Smolucho...
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Colloids have a striking relevance in a wide spectrum of industrial formulations, spanning from personal care products to protective paints. Their behaviour can be easily influenced by extremely weak forces, which disturb their thermodynamic equilibrium and dramatically determine their performance. Motivated by the impact of colloidal dispersions i...
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Most bacteria form organized sessile communities, known as biofilms. Their ubiquity and relevance have stimulated the development of efficient mathematical models able to predict biofilm evolution and characteristics at different conditions. Here we present a study of the early stages of bacterial biofilm formation modeled by means of individual ce...
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We perform extensive Monte Carlo simulations to investigate the phase behaviour of colloidal suspensions of hard board-like particles (HBPs). While theories restricting particle orientation or ignoring higher ordered phases suggest the existence of a stable biaxial nematic phase, our recent simulation results on monodisperse systems indicate that t...
Article
We examine the phase behaviour of colloidal suspensions of hard board-like particles (HBPs) as a function of their shape anisotropy, and observe a fascinating spectrum of nematic, smectic, and columnar liquid-crystalline phases, whose formation is entirely driven by excluded volume effects. We map out the phase diagram of short and long HBPs by gra...
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We propose a simple but powerful theoretical framework to quantitatively compare Brownian dynamics (BD) and dynamic Monte Carlo (DMC) simulations of multicomponent colloidal suspensions. By extending our previous study focusing on monodisperse systems of rodlike colloids, here we generalize the formalism described there to multicomponent colloidal...
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The transport properties of colloids in anisotropic media constitutes a general problem of fundamental interest in experimental sciences, with a broad range of technological applications. This work investigates the transport of soft spherical colloids in binary mixtures with rod-like particles by means of Monte Carlo and Brownian Dynamics simulatio...
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The liquid crystal phase diagram of the soft repulsive Kihara fluid has been characterised by means of Monte Carlo simulations, for a selection of elongations of the rod-like particles (L*= 2-7) and over a broad range of temperatures (T *= 1-50). Three qualitatively different regimes of liquid crystalline behaviour are described that are related to...
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Parsons–Lee approach is formulated for the isotropic–nematic transition in a binary mixture of oblate hard spherocylinders and hard spheres. Results for the phase coexistence and for the equation of state in both phases for fluids with different relative size and composition ranges are presented. The predicted behaviour is in agreement with Monte C...
Article
A major problem in the extraction of the reaction probability in bimolecular processes is the disentanglement from the influence of molecular diffusion. One of the strategies to overcome it makes use of reactive solvents in which the reactants do not need to diffuse to encounter. However, most of our quantitative understanding of chemical reactions...
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We report on the diffusion of purely repulsive and freely rotating colloidal rods in the isotropic, nematic, and smectic liquid crystal phases to probe the agreement between Brownian and Monte Carlo dynamics under the most general conditions. By properly rescaling the Monte Carlo time step, being related to any elementary move via the corresponding...
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We investigate the phase behavior of a model for colloidal hard platelets and rigid discotic molecules: oblate hard spherocylinders (OHSC). We perform free energy calculations using Monte Carlo simulations to map out the phase diagram as a function of the aspect ratio L∕D of the particles. The phase diagram displays a stable isotropic phase, a nema...
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The effective interaction between two colloidal particles in a bath of monovalent co- and counterions is studied by means of lattice Monte Carlo simulations with the primitive model. The internal electrostatic energy as a function of the colloid distance is studied fixing the position of the colloids. The free energy of the whole system is obtained...
Article
Technological applications of discotic nematogens are limited by the robustness of the columnar phases. This investigation employs Monte Carlo simulations to explore the potentiality of tailoring specific interactions of either stacking or peripheral type in order to enhance nematic stability. It is concluded that the nematic phase is favored for d...
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We investigate the isotropic-to-smectic transformation in a fluid of colloidal hard rods using computer simulations. At high supersaturation, we observe spinodal decomposition: many small clusters are formed at the initial stage of the phase transformation, which form a percolating network that eventually transforms into a stable bulk smectic phase...
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The equilibrium and microscopic properties of systems of discotic molecules have been investigated with Monte Carlo (MC) simulations. The study focuses on the behaviour of the fluid in the isotropic phase in the vicinity of the first liquid crystal transition, which involves either a nematic or a columnar phase. The molecules are modelled by rigid...
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Full-text available
The liquid crystal phase diagram of fluids of rigid discotics with soft interactions has been investigated by means of Monte Carlo simulations. The particles are modeled by spherocylinders or Gay-Berne ellipsoids with thickness/diameter aspect ratios of L/D=0.2. The study includes a variety of pair interaction potentials, featuring different energe...
Article
The liquid crystal phase diagram of the discotic hard spherocylinder fluid is investigated in Monte Carlo simulations. The study involved the development of an efficient algorithm to compute the shortest distance between two oblate spherocylinder particles. Molecular aspect ratios within L/D = 0.1–0.5 are considered. A rich set of hexatic colum...
Article
The liquid crystal phase diagram of the discotic hard spherocylinder fluid is investigated by Monte Carlo simulations. Thickness-to-diameter aspect ratios within L/D=0.2-0.5 are considered. Three distinct columnar phases are found, namely, a hexatic interdigitated phase (D(hi)), a hexatic ordered phase (D(ho)), both with long-range spatial correlat...
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We present the first examples of thermotropic biaxial mesophases in mixtures of model attractive uniaxial molecules. Nematic and smectic biaxial phases are identified. The nematic biaxial phase has remained a key challenge in the science of liquid crystals since it was first proposed almost 40 years ago. Very recently the first experimental evidenc...
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We study effective colloidal interactions in de-ionized colloidal mixtures through sedimentation-diffusion equilibrium. We derive a coarse-grained effective model (EM) and compare its density profiles with those of the computationally much more expensive primitive model (PM) of colloids and counterions in gravity. The EM, which contains not only st...
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Using computer simulations, we study the isotropic-to-nematic nucleation in a fluid of colloidal hard rods as well as in a mixture of colloidal rods and non-adsorbing polymer. In order to follow the transformation of the system from the isotropic to the nematic phase, we use a new cluster criterion that enables us to distinguish the nematic cluster...
Article
The stability of isotropic (I), nematic (N), smectic A (Sm A), and hexatic (Hex) liquid crystalline phases is studied for a fluid of molecules with a rod-like shape and dispersive interactions dependent on orientation. The fluid is modeled with the spherocylindrical Gay-Berne-Kihara interaction potential proposed in a recent work, with parameters f...
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Parsons-Lee and Onsager theories are formulated for the isotropic-nematic transition in a binary mixture of hard rods and hard spheres. Results for the phase coexistence and for the equation of state in both phases for mixtures with different relative sizes and composition are presented. The two theories explain correctly the general behavior obser...
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Sedimentation-diffusion equilibrium density profiles of suspensions of charge-stabilized colloids are calculated theoretically and by Monte Carlo (MC) simulations, both for a one-component model of colloidal particles interacting through pairwise screened-Coulomb repulsions and for a three-component model of colloids, cations, and anions with unscr...
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We study the kinetic pathways for the isotropic-to-nematic transition in a fluid of colloidal hard rods. In order to follow the formation of the nematic phase, we develop a new cluster criterion that distinguishes nematic clusters from the isotropic phase. Applying this criterion in Monte Carlo simulations, we find spinodal decomposition as well as...
Article
The fluorescence quenching by electron transfer of a fluorophore, 2,5-bis(dimethylamino)-1,3-benzenedicarbonitrile, to 1,3-dimethyl-2-nitrobenzene, has been studied by means of time-resolved and steady-state experiments at different viscosities and up to large quencher concentrations. Differential Encounter Theory (DET) has been used to rationalize...
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We study the equilibrium sediment of a multicomponent system of charged colloids using primitive model Monte Carlo simulations, which include counterions explicitly. We find separation of the different colloidal components into almost pure layers, where colloids with large charge-to-mass ratio sediment higher in the sample. This effect appears due...
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A general approach based on the Parsons-Lee theory for soft repulsive molecular fluids is employed to investigate the nematogenic behavior of prolate thermotropic liquid crystals over a broad temperature range. The theory is solved for the particular case of the Kihara soft repulsive spherocylinder model, which is mapped into an effective hard core...
Article
An intermolecular potential is introduced for the study of molecular mesogenic fluids. The model combines distinct features of the well-known Gay-Berne and Kihara potentials by incorporating dispersive interactions dependent on the relative pair orientation to a spherocylinder molecular core. Results of a Monte Carlo simulation study focused on the...
Article
Crowding effects relevant to the phase stability of binary mixtures of rod-like and spherical particles are investigated by means of Monte Carlo simulations in the isobaric NPT ensemble. The two types of particles are represented, respectively, by freely rotating hard spherocylinders of a moderate aspect ratio (L/sigma = 5) and hard spheres of the...
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The liquid crystal phases of the Kihara fluid have been studied in computer simulations. The work focuses on the isotropic-nematic-smectic-A triple point region, especially relevant for the understanding of the properties and the design of real mesogens with specific phase diagrams. The Kihara interaction resembles more appropriately than other rel...
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The Percus-Yevick equation for square-well spherocylinders has been numerically solved for some selected orientations following a methodology proposed previously for different fluids of elongated molecules. The equation is solved for particles of aspect ratios ranging from L/sigma=0.3 up to L/sigma=5.0, attractive range lambda/sigma=1.5, and packin...