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Asked 5 September 2017

How to convert HARDI diffusion data (hdr/img) to nifiti with fslchfiletype for TBSS?

Hi Everyone, I'm really new to Diffusion Imaging and I would like to enquire how do we go about  using fslchfiletype to convert hdr/img to .nii format? Is there a GUI for fslchfiletype?
Would really appreciate some help on this. Thank you!
Jonatan Ottino González
Children's Hospital Los Angeles
Germaine,
you may want to check Chris Rorden's tool (http://people.cas.sc.edu/rorden/mricron/dcm2nii.html)
cheers
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