Cancer Biology & Therapy

Cancer Biology & Therapy

Published by Taylor & Francis

Online ISSN: 1555-8576

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Print ISSN: 1538-4047

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41 reads in the past 30 days

Various types of microbes (left) that have been found to make up different human microbiomes (right).
As microbes are present in local tissues, the tumor microenvironment (middle), and within tumor cells themselves, these tumor-associated microbes have been found to impact different cancer types through different methods, including metabolite-mediated interactions that can be pro-tumorigenic or anti-tumorigenic (top left); direct interactions with cancer cells to control the cell cycle and proliferation (bottom left); activation of inflammatory cells (glowing cells), such as T-cells (in blue), macrophages (in purple), and antibodies (in blue) (top right); and by disrupting vascular barriers to promote metastasis (bottom right).
The human microbiome and cancer: a diagnostic and therapeutic perspective

July 2023

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221 Reads

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27 Citations

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Huapeng Li

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41 reads in the past 30 days

A mathematical model for predicting the spatiotemporal response of breast cancer cells treated with doxorubicin

February 2024

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128 Reads

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3 Citations

Aims and scope


Publishes articles on the molecular basis of cancer, including translational diagnostic relevance or therapy, reviews, op-ed pieces and meeting reports.

  • The goal is to foster communication and the rapid exchange of information through timely publication of important advances within the field.
  • Topics covered include: Existing and emerging technologies such as genome sequencing to increase understanding of genomic and proteomic alterations occurring within tumors; Tumor pathogenesis, development and progression; Drug-drug interactions; mechanisms of action for novel agents; combination chemotherapy; Pharmacogenomics, pharmacodynamics, and pharmacokinetic properties of anticancer agents; Anticancer chemotherapeutic agents, biological agents, immunomodulatory drugs, cell therapy and gene therapy.
  • The journal publishes original research, reviews, meeting reports, bedside-to-bench reports, letters to the editor, and perspective articles.
  • Cancer Biology & Therapy operates a single-anonymized peer review policy.
  • Please note that Cancer Biology & Therapy converted to a full Open Access journal from Volume 23 (2022).

For a full list of the subject areas this journal covers, please visit the journal website.

Recent articles


Serum levels of cytokines and chemokines of irradiated rats who had their irradiated limb massaged (IR-MT) or not (IR). (Figure was patterned after Bove & Mokler³⁵, where an overview of the functions of the substances assayed can be found.³⁵ Pink and blue shades indicate that the substances have been reported to be inflammatory or anti-inflammatory, respectively. There was a trend for the majority of the substances to be decreased in rats that had their irradiated limbs massaged, however, there were no statistically significant results (t-tests).
Trichrome staining and method for quantification of collagen. a. Regions of interest (ROIs) outlined in yellow. Collagen is stained blue. The amount of blue was quantified. b. in the same section, ROIs to be excluded are outlined in yellow. c and d. Representative images of sections from control (unirradiated) and irradiated and untreated limbs, respectively. e. Quantification of control and irradiated showed no difference between groups. Scale bar (in c) = 100 µm.
Picrosirius staining for collagen in nerve. Collagen is stained yellow in this method. Representative images of control (top) and irradiated (bottom) nerves are shown. When quantified, there was no difference between groups. Scale bar = 100 µm.
Device to shield rats from radiation. Isoflurane-anesthetized rats were positioned supine with their heads toward the operator (at the bottom of the picture). The forelimb was pulled through an opening in the side of the shield and taped for stability. A spot between the arms can be seen – this was positioned in the center of the irradiator. The anesthesia manifold can be seen at the bottom left.
Evaluating massage therapy for radiation-induced fibrosis in rats: preliminary findings and palpation results
  • Article
  • Full-text available

December 2024

Geoffrey M. Bove

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Holly McMillan

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Mary F. Barbe

Radiation-induced fibrosis (RIF) is a common side effect of cancer treatment, but can manifest into a devastating syndrome for which there is no preventive measure or cure. In rats who perform a repetitive work task, who left untreated develop signs and symptoms that resemble repetitive motion disorders in humans, we have shown that manual therapy prevents the development of fibrosis and other key biomarkers. The fibrosis of RIF and repetitive motion disorders has similar biomarkers. In rats, we sought to determine if manual therapy would alter key biomarkers of post-irradiation fibrosis following X-ray irradiation given to the rat forelimb. One limb of rats was given a damaging dose of X-ray irradiation. Some limbs were massaged using a protocol previously described and characterized. Serum inflammatory markers, histological assays of tissue fibrosis and nerve pathology, and electrophysiology for neuropathic discharge were assayed after 8 weeks. We also tested if an experienced therapist could identify the irradiated limb using blinded palpation at the 8 week end-point. While preliminary assays showed robust changes compared to control limbs, the other assays did not show similar pathology. Our therapist could detect each irradiated limb. Serum inflammatory markers were reduced by massage to the irradiated limb. We conclude that blinded palpation is sensitive to detect subtle changes in tissue following irradiation. In contrast to the preliminary studies, the dose of irradiation used was insufficient to induce long-lasting deep fibrosis or nerve degeneration. We suspect that a difference in housing, and thus physical activity, was the plausible reason for this difference.


Characterization of the sensitivity of olaparib-resistant OC cells to olaparib. (a) The viability rate of SKOV3 and SKOV3R cells exposed to olaparib (0-750 μM) was assessed via a CCK-8 assay. (b) SKOV3 and SKOV3R cells were treated with 0 μM, 30 μM, 140 μM, or 280 μM olaparib for 72 hours. Then, the protein expression of cleaved PARP, caspase-3 and cleaved caspase-3 was measured. (c) SKOV3 and SKOV3R cells were treated with 30 μM olaparib for 72 h, and the apoptotic cells were stained with annexin V/7-AAD and analyzed by flow cytometry. (d) The colony formation ability of SKOV3 and SKOV3R cells treated with 5 μM olaparib for 2 weeks was analyzed. (e) The viability rate of SKOV3 and SKOV3R cells exposed to pamiparib (0-250 μM) and fluzoparib (0-250 μM) was assessed via a CCK-8 assay. (f) SKOV3 and SKOV3R cells were treated with 0 μM pamiparib or fluzoparib or with pamiparib or fluzoparib at concentrations 5-fold or 10-fold greater than the IC50 for 72 hours, after which the protein expression of cleaved PARP, caspase-3 and cleaved caspase-3 was measured. The data are shown as the mean±sem; *, p < .05, **, p < .01, ***, p < .001, ****, p < .0001.
Biological characteristics and expression of LCP1 in olaparib-resistant OC cells. (a) A total of 1 × 10⁵ cells were seeded in a six-well plate, and the number of cells was counted after 1-5 days. (b) The migration abilities of SKOV3 and SKOV3R cells were detected via wound healing assay. (c)The migration and invasion abilities of SKOV3 and SKOV3R cells were detected via transwell assays. (d) The expression of EMT proteins in SKOV3 and SKOV3R cells was confirmed by western blot analysis. (e) Heatmap and (left) volcano plot (right) showing the genes that were differentially expressed between SKOV3 and SKOV3R cells. LCP1 was identified as one of the most highly upregulated genes in SKOV3R cells compared with SKOV3 cells. (f) qRT‒pcr was used to measure the mRNA levels of LCP1 in olaparib-resistant OC cells. (g) The expression of LCP1 in SKOV3 and SKOV3R cells was confirmed by western blot analysis.
LCP1 drives olaparib resistance in OC cells. (a) LCP1 expression in LCP1-knockdown and LCP1-overexpressing OC cells was confirmed via western blotting. (b) After exposure to olaparib (0-750 μM), the viability of LCP1-knockdown and LCP1-overexpressing OC cells was examined by a CCK-8 assay. (c) Colony formation assays were performed with LCP1-knockdown or LCP1-overexpressing OC cells that were treated with 3 μM olaparib for 2 weeks. (d) LCP1-knockdown and LCP1-overexpressing OC cells were treated with olaparib for 72 hours, after which the protein expression of cleaved PARP, caspase-3 and cleaved caspase-3 was measured. (e) LCP1-knockdown and LCP1-overexpressing SKOV3 cells were treated with 30 μM olaparib for 72 h. LCP1-overexpressing A2780 cells were treated with 10 μM olaparib for 72 h. The apoptotic cells were stained with annexin V/7-AAD and analyzed by flow cytometry.
LCP1 promotes the abilities of migration and invasion in ovarian cancer cells(a) the migration abilities of LCP1-knockdown and LCP1-overexpressing OC cells were detected via wound healing assay. (b) The migration and invasion abilities of LCP1-knockdown and LCP1-overexpressing OC cells were detected via transwell assays.
LCP1 promotes olaparib resistance by activating the JAK2/STAT3 signaling pathway and EMT. (a) The expression of STAT3 and EMT proteins in LCP1-knockdown and LCP1-overexpressing OC cells treated with fedratinib or not was confirmed by western blot analysis. (b) Single-gene GSEA showed that the JAK/STAT signaling pathway was enriched in SKOV3R cells. (c) The protein expression of JAK2/STAT3 pathway in SKOV3 and SKOV3R cells was confirmed by western blot analysis.
LCP1 promotes ovarian cancer cell resistance to olaparib by activating the JAK2/STAT3 signalling pathway

November 2024

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9 Reads

Background Resistance to poly (ADP-ribose) polymerase (PARP) inhibitors (PARPis) remain a major challenge in ovarian cancer (OC) treatment. However, the underlying mechanism of PARPi resistance is still poorly characterized. Increasing evidence has proven that lymphocyte cytosolic protein 1 (LCP1) promotes tumor progression. The JAK2/STAT3 signaling pathway plays an important role in increasing tumor metastatic ability and chemoresistance in cancer by promoting epithelial – mesenchymal transition (EMT). Methods We established an olaparib-resistant OC cell line and studied its toxicologic effects through cell survival, Transwell, colony formation, western blotting and flow cytometry assays. RNA sequencing and screening were then performed to identify genes associated with olaparib resistance. Lymphocyte cytosolic protein 1 (LCP1) was found to be overexpressed in olaparib-resistant OC cells. Results The inhibition of cell survival and promotion of cell apoptosis induced by olaparib in parental cells were significantly attenuated in olaparib-resistant cells. LCP1 was upregulated in olaparib-resistant cells compared with parental OC cells. Moreover, we found that the protein levels of JAK2/STAT3 signaling pathway components and EMT markers were increased in olaparib-resistant cells. Overexpression of LCP1 increased olaparib resistance in OC cells, and knockdown of LCP1 attenuated olaparib resistance. The changes in the protein levels of JAK2/STAT3 signaling pathway members and EMT markers between the cell types were similar to the changes in the levels of LCP1. Conclusions These findings indicate that LCP1 expression may play an important role in the resistance of OC to olaparib by activating the JAK2/STAT3 signaling pathway and EMT. LCP1 could be a potential therapeutic target for patients with OC who are resistant to olaparib. Our study provides a new mechanism of olaparib resistance.


Liu-Shen-Wan inhibits PI3K/Akt and TRPV1 signaling alleviating bone cancer pain in rats

Patients with advanced-stage cancers often suffer from severe pain caused by bone metastasis and destruction, for which effective treatment options are limited. Liu-Shen-Wan (LSW) is a widely recognized herbal formula utilized for pain relief. This study aims to elucidate the effects of LSW on bone cancer pain (BCP). In this study, the pharmacology of LSW on BCP was screened by network pharmacology. A BCP model was conducted using Walker 256 cells. Paw withdrawal threshold and paw withdrawal latency were employed as measures to assess the pain threshold in rats. The pathways and cell types of LSW against BCP were explored. Next, the impact of LSW on Walker 256 cells was evaluated, and UPLC-MS was utilized to identify the active ingredients of LSW. Furthermore, the effects of the key active ingredient, Bufalin, on the BCP rats were evaluated. There were 275 shared targets between LSW and BCP, which were enriched in neural tissue ligand-receptor interaction pathway. LSW increased pain threshold and decreased inflammatory cytokines levels in BCP rats by inhibiting PI3K/Akt and transient receptor potential vanilloid 1 (TRPV1) signaling through astrocytes and microglia. LY294002 further alleviated BCP in rats, while the effects were reversed after treatment with insulin-like growth factor 1 (IGF-1). Both LSW and its active ingredient Bufalin were shown to inhibit the viability and migration of Walker 256 cells and induce apoptosis. Bufalin appears to be the key active ingredient of LSW and exerts its pain-relieving effects by suppressing PI3K/Akt and TRPV1 signaling in BCP.


NAALADL2-AS2 functions as a competing endogenous RNA to regulate apoptosis and drug resistance in DLBCL

November 2024

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6 Reads

To explore role of NAALADL2-AS2 as ceRNA in DLBCL. Fluorescence in situ hybridization was used to determine location of NAALADL2-AS2 in cells and to verify its expression in DLBCL tissues. The miRNAs interacting with NAALADL2-AS2 and related regulatory genes were identified by small interfering RNA (siRNA) assay, luciferase reporter assay, fluorescent quantitative polymerase chain reaction, western blotting. DLBCL cells transfected with NAALADL2-AS2 siRNA or control siRNA were treated with doxorubicin, rituximab at different concentrations alone or in combination. The growth curves, drug sensitivity changes of cells before and after transfection were detected by MTT assay, ATP-TCA drug sensitivity test. Cell proliferation was detected by BrdU cell proliferation assay, and apoptosis was detected by Annexin V-fluorescein isothiocyanate/propidium iodide staining. The effects and mechanisms of NAALADL2-AS2 on proliferation, apoptosis, drug resistance of DLBCL cells were studied at cellular level. We confirmed expression of NAALADL2-AS2 in both cytoplasm and nuclei of DLBCL cells. Additionally, we observed elevated levels of NAALADL2-AS2 in DLBCL tissues. We discovered that NAALADL2-AS2 functions as ceRNA to inhibit expression of miR-34a, miR-125a, whereas overexpression of NAALADL2-AS2 indirectly upregulates expression of BCL-2. Interfering with NAALADL2-AS2 promoted apoptosis in DLBCL cells, resulting in approximately a 40% increase in sensitivity to doxorubicin and rituximab. In vivo experiments further confirmed that targeting NAALADL2-AS2 effectively suppressed tumor growth, leading to upregulation of miR-34a and miR-125a, downregulation of BCL-2, and enhanced apoptosis in DLBCL cells, which significantly improved their sensitivity to doxorubicin and rituximab by approximately 50%. These results indicate that NAALADL2-AS2/miR-34a, miR-125a/BCL-2 networks hold promise as therapeutic targets for treatment of DLBCL.


PDLIM1 is highly expressed in DLBCL tissues. (a) PDLIM1 expression levels in DLBCL samples compared to normal tissues, based on GEPIA analysis of the TCGA data. (b-c) Kaplan-Meier survival curves showing overall survival (b) and disease-free survival (c) for DLBCL patients with high vs. low PDLIM1 expression from TCGA data. (d) qRT-pcr analysis of PDLIM1 mRNA levels in 76 DLBCL tumor samples compared to matched non-carcinoma samples. (e) Western blot analysis of PDLIM1 protein levels in three pairs of DLBCL tumor and adjacent non-tumor tissues. (f–g) Kaplan-Meier survival curves showing overall survival (f) and disease-free survival (g) for DLBCL patients stratified by PDLIM1 expression levels.
PDLIM1 silencing suppresses DLBCL cell growth and induces their apoptosis. (a) Western blot analysis of PDLIM1 protein levels in four DLBCL cell lines compared to normal human B lymphocytes (GM12878). (b) Western blot confirmation of PDLIM1 knockdown efficiency using different shRNAs in TMD8 and SU-DHL-4 cells. (c) Cell proliferation analysis (CCK-8 assay) for TMD8 and SU-DHL-4 cells following PDLIM1 knockdown. (d) Apoptosis analysis (Annexin V and PI staining) of TMD8 and SU-DHL-4 cells after PDLIM1 knockdown.
Knockdown of PDLIM1 inhibits tumor growth of DLBCL cells in vivo. (a) tumor growth curves of xenografts derived from SU-DHL-4 cells expressing sh-PDLIM1 or sh-nc. (b) Final tumor weights at the end of the experiment. The images of tumor samples in each group was shown. (c) Western blot analysis of PDLIM1 expression in tumor samples from sh-PDLIM1 and sh-nc groups. (d) H&E staining, ki-67 immunohistochemistry, and TUNEL assay results for tumor tissues from sh-PDLIM1 and sh-nc groups.
PDLIM1 is a potential target of miR-3940-5p. (a) venn diagram showing the intersection of predicted miRNAs targeting PDLIM1 and downregulated miRNAs in DLBCL. (b) qRT-pcr analysis of PDLIM1 mRNA levels in TMD8 and SU-DHL-4 cells transfected with mimics of the four identified miRnas. (c) miR-3940-5p expression levels in DLBCL samples from GSE173080 dataset. (d) Predicted binding sites of miR-3940-5p on PDLIM1 mRNA 3‘UTR. (e) Luciferase reporter assay results for wild-type and mutated PDLIM1 3‘UTR reporters in the presence of miRNA mimic or miR-nc (negative control). (f) Western blot analysis of PDLIM1 protein levels in TMD8 and SU-DHL-4 cells transfected with miR-nc or miR-3940-5p mimic. (g) qRT-pcr analysis of miR-3940-5p expression in DLBCL cell lines compared to normal human B lymphocytes. (h) qRT-pcr analysis of miR-3940-5p levels in 76 DLBCL samples and matched non-carcinoma samples. (i) Correlation analysis between PDLIM1 and miR-3940-5p expression levels in DLBCL samples.
miR-3940-5p overexpression inhibits DLBCL cell growth and induces apoptosis by targeting PDLIM1. (a) Western blot confirmation of PDLIM1 overexpression in SU-DHL-4 and TMD8 cells. (b) Cell proliferation assay results for SU-DHL-4 and TMD8 cells transfected with miR-NC+vector, miR-3940-5p+vector, or miR-3940-5p+PDLIM1 expression vector. (c) Apoptosis analysis of SU-DHL-4 and TMD8 cells under different transfection conditions. (d) Transwell migration assay results showing cell migration under different transfection conditions. (e) Transwell invasion assay results showing cell invasion under different transfection conditions.
PDLIM1, a novel miR-3940-5p target, regulates the malignant progression of diffuse large B-cell lymphoma

November 2024

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11 Reads

Background PDZ And LIM domain protein 1 (PDLIM1), a protein-coding gene, has been widely reported to exhibit differential expression patterns across various human cancers, including hematological malignancies. This study aimed to investigate PDLIM1 expression pattern and its functional role in diffuse large B-cell lymphoma (DLBCL) both in vitro and in vivo. Methods PDLIM1 expression patterns were reanalyzed using data from the Gene Expression Omnibus, and the results were subsequently validated in patient tissue samples and a panel of four DLBCL cell lines. MicroRNA-3940-5p (miR-3940-5p) was identified as an upstream regulator of PDLIM1. The interaction between PDLIM1 and miR-3940-5p and its effects on DLBCL cellular activities and cancer development were further explored using a DLBCL mouse model. Results Elevated PDLIM1 expression was observed in DLBCL cells and tissues. Reduced cell proliferation and increased DLBCL cell apoptosis were observed following the knockdown of this gene. Furthermore, short hairpin RNA (shRNA)-mediated PDLIM1 knockdown diminished tumorigenesis of DLBCL cells in nude mice. miR-3940-5p was identified as an upstream regulator of PDLIM1. PDLIM1 expression and function were negatively modulated by the upregulation of miR-3940-5p, consequently affecting the malignant phenotype of DLBCL cells. Conclusion These findings suggest that the miR-3940-5p/PDLIM1 axis may play a crucial role in DLBCL pathogenesis and could potentially be exploited for therapeutic interventions.


Tumor microenvironment of PCNSL. The figure materials come from Servier Medical Art (http://smart.servier.com/) and it is licensed under a creative common attribution 3.0 generic license (https://creativecommons.Org/licenses/by/3.0/).
Tumor microenvironment in primary central nervous system lymphoma (PCNSL)

Primary central nervous system lymphoma (PCNSL) is one of the rare lymphomas limited to the central nervous system. With the availability of immunotherapy, the tumor microenvironment (TME) attracts much attention nowadays. However, the systematic studies on the TME of PCNSL are lacking. By reviewing the existing research, we found that the TME of PCNSL is infiltrated with abundant TAMs and TILs, among which cytotoxic T cells (CTLs) and M2-polarized macrophages are principal. However, the counts of immune cells infiltrated in the TME of PCNSL are significantly lower than systemic diffuse large B-cell lymphoma (DLBCL). In addition, PCNSL can attract the infiltration of immunosuppressive cells and the loss of HLA I/II expression, overexpress inhibitory immune checkpoints, and release immunosuppressive cytokines to form an immunosuppressive TME. The immunosuppressive effect of TME in PCNSL is significantly stronger than that in systemic DLBCL. These characteristics of TME highlight the immunosuppression of PCNSL.


DSN1 may predict poor prognosis of lower-grade glioma patients and be a potential target for immunotherapy

November 2024

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4 Reads

DSN1 has been previously found to be positively correlated with various cancers. However, the effect of DSN1 or its methylation on the prognosis, molecular characteristics, and immune cell infiltration of low-grade glioma (LGG) has not yet been studied. We obtained 1046 LGG samples from the The Cancer Genome Atlas, The Chinese Glioma Genome Atlas (CGGA) microarray, and CGGA RNA-Seq databases. Bioinformatic methods (gene set enrichment analysis (GSEA), chi-square test, multivariate), and laboratory validation were used to investigate DSN1 in LGG. The expression levels of DSN1 mRNA and protein in LGG were substantially higher than those in normal brain tissue, and their expression was negatively regulated by methylation. The survival time of patients with low expression of DSN1 and cg12601032 hypermethylation was considerably prolonged. DSN1 was a risk factor, and of good diagnostic and prognostic value for LGG. Importantly, the expression of DSN1 is related to many types of tumor-infiltrating immune cells and has a positive correlation with PDL1. DSN1 promoted the activation of multiple cancer-related pathways, such as the cell cycle. Additionally, knockdown of DSN1 substantially inhibited the proliferation and invasion of LGG cells. To the best of our knowledge, this study is the first comprehensive analysis of the mechanism of DSN1 leading to poor prognosis of LGG, which provides a new perspective for revealing the pathogenesis of LGG. DSN1 or its methylation has diagnostic value for the prognosis of glioma, and may become a new biological target of anti-tumor immunotherapy.


The transcription levels, prognostic value, and genetic alteration of CDH2 and CDH13 in adrenocortical carcinoma (ACC). (a) Boxplot showing transcription level of CDH2 in patients with ACC (GEPIA); (b) Boxplot showing transcription level of CDH13 in patients with ACC (GEPIA); (c – f) Boxplot showing transcription level of CDH13 in patients with ACC (BEST); (g and h) Boxplot showing transcription level of CDH2 in patients with ACC based on sex (UALCAN and BEST); (i) Boxplot showing transcription level of CDH2 in patients with ACC based on age (BEST); (j) boxplot showing transcription level of CDH13 in patients with ACC based on age (BEST); (k) the overall survival curve of CDH2 in patients with ACC (GEPIA); (l) the disease-free survival curve of CDH2 in patients with ACC (GEPIA); (m) the overall survival curve of CDH13 in patients with ACC (GEPIA); (n) the disease-free survival curve of CDH13 in patients with ACC (GEPIA); (o) Genetic alteration of CDH2 in patients with ACC (cBioportal); (p) Genetic alteration of CDH13 in patients with ACC (cBioportal); *p < .05.
Interaction and function analyses of CDH2, CDH13, and their altered neighboring genes (ANGs) in adrenocortical carcinoma (ACC). (a) Protein – protein interaction (PPI) network of CDH2 and its ANGs in patients with ACC (STRING); (b) Network analyses of CDH2 and its ANGs in patients with ACC (GeneMANIA); (c) PPI network of CDH13 and its ANGs in patients with ACC (STRING); (d) network analyses of CDH13 and its ANGs in patients with ACC (GeneMANIA); (e) biological processes of CDH2 and its ANGs in patients with ACC (Metascape); (f) cellular components of CDH2 and its ANGs in patients with ACC (Metascape); (g) molecular functions of CDH2 and its ANGs in patients with ACC (Metascape); (h) biological processes of CDH13 and its ANGs in patients with ACC (Metascape); (i) cellular components of CDH13 and its ANGs in patients with ACC (Metascape); (j) Molecular functions of CDH13 and its ANGs in patients with ACC (Metascape).
Genes differentially expressed in correlation with CDH2 and CDH13 expression in adrenocortical carcinoma (ACC) (obtained using LinkedOmics). (a and d) the Pearson test was used to analyze correlations between CDH2, CDH13, and genes differentially expressed in ACC, respectively; (b, c, e, and f) heat maps showing genes positively and negatively correlated with CDH2 and CDH13 in ACC, respectively (top 50 genes); the scatter plot shows Pearson correlation of CDH2 and CDH13 expression with expression of VSNL1 (g), TCF7 (h), RASL10B (i), COL4A1 (j), ANGPT2 (k), and ESAM (l) in ACC; red and blue indicate positively and negatively correlated genes, respectively.
The correlation between CDH13 expression and immune cell infiltration and anti-PD1/CTLA-4/PD-L1 immunotherapy in adrenocortical carcinoma (ACC). (a) The correlation between CDH13 expression and immune cell infiltration levels in patients with ACC (TIMER); (b) the cumulative survival curve of CDH13 and immune cell infiltration in patients with ACC (TIMER); (c) heat maps showing the correlation between CDH13 and immune cell infiltration in ACC (BEST); (d-f) the correlation between CDH13 expression and immune score in patients with ACC (BEST); (g and i) boxplot showing the correlation between CDH13 expression and anti-PD1/CTLA-4/PD-L1 immunotherapy in ACC (BEST).
IC50 evaluation of foretinib and elesclomol in different tissue types of cancer. (a and f) heat maps showing CDH2 and CDH13 low expression indicates resistance drugs ranking, respectively (BEST); (b) IC50 values of foretinib for the different cell lines (genomics of drug sensitivity in Cancer); (c) area under the curve (AUC) values of foretinib for the different cell lines (genomics of drug sensitivity in Cancer); (d) IC50 values of foretinib for the SW13 cell line (genomics of drug sensitivity in Cancer); (e) AUC values of foretinib for the SW13cell line (genomics of drug sensitivity in Cancer); (g) IC50 values of elesclomol for the different cell lines (genomics of drug sensitivity in Cancer); (h) AUC values of elesclomol for the different cell lines (genomics of drug sensitivity in Cancer); (i) IC50 values of elesclomol for the SW13 cell line (genomics of drug sensitivity in Cancer); (j) AUC values of elesclomol for the SW13 cell line (genomics of drug sensitivity in cancer).
CDH2 and CDH13 as potential prognostic and therapeutic targets for adrenocortical carcinoma

Cadherin 2 (CDH2, N-cadherin) and cadherin 13 (CDH13, T-cadherin, H-cadherin) affect the progress and prognoses of many cancers. However, their roles in adrenocortical carcinoma (ACC), a rare endocrine cancer, remain unclear. To decipher the roles of these proteins in ACC and to identify their regulatory targets, we analyzed their expression levels, gene regulatory networks, prognostic value, and targets in ACC, using various bioinformatic analyses. CDH2 was strongly downregulated and CDH13 was strongly upregulated in patients with ACC; the expression levels of these genes affected the prognosis. In 75 patients, the expression of CDH2 and CDH13 was altered by 8% and 5%, respectively. CDH2 and CDH13, as well as their neighboring genes, were predicted to form a complex network of interactions, mainly through coexpression and physical and genetic interactions. CDH2 and its altered neighboring genes (ANGs) mainly affect tumor-related gene expression, cell cycle, and energy metabolism. The regulation of tumor-related integrin function, gene transcription, metabolism, and amide and phospholipid metabolism are the main functions of CDH13 and its ANGs. MiRNA and kinase targets of CDH2 and CDH13 in ACC were identified. CDH13 expression in patients with ACC was positively associated with immune cell infiltration. Anti-PD1/CTLA-4/PD-L1 immunotherapy significantly downregulated the expression of CDH13 in patients with ACC. Foretinib and elesclomol were predicted to exert strong inhibitory effects on SW13 cells by inhibiting the expression of CDH2 and CDH13. These data indicate that CDH2 and CDH13 are promising targets for precise treatment of ACC and may serve as new biomarkers for ACC prognosis.


The tubulin polymerization inhibitor gambogenic acid induces myelodysplastic syndrome cell apoptosis through upregulation of Fas expression mediated by the NF-κB signaling pathway

November 2024

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1 Read

The development of an effective treatment for myelodysplastic syndrome (MDS) is needed due to the insufficient efficacy of current therapies. Gambogenic acid (GNA) is a xanthone constituent of gamboge, a resin secreted by Garcinia hanburyi Hook. f. GNA exhibits antitumor and apoptosis-inducing activities against some cancer cells, but the mechanism is unknown. This study aimed to validate the anti-proliferative and apoptosis-inducing effects of GNA on MDS cells and to elucidate the mechanisms underlying those activities. Apoptosis, proliferation and cell cycle of MDS-L cells were assessed by the caspase 3/7 assay, cell counting and flow cytometry, respectively. The levels of apoptotic, tubulin, NF-κB pathways, and Fas proteins were determined by Western blotting. CRISPR/Cas9 knockout (KO) plasmids were used to generate KO cells of p65 and Fas. MDS cell growth in a xenograft model was evaluated by the AkaBLI system. GNA induced MDS cell apoptosis, accompanied by a reduction in the anti-apoptotic protein MCL-1 expression, and inhibited their growth in vitro and in vivo. GNA combined with the MCL-1 inhibitor MIK665 potently suppressed the proliferation of MDS cells. GNA interfered with tubulin polymerization, resulting in G2/M arrest. GNA induced NF-κB activation and upregulation of Fas, the latter of which was inhibited by p65 KO. GNA-induced apoptosis was attenuated in either p65 KO or Fas KO cells. These results demonstrate that GNA inhibited tubulin polymerization and induced apoptosis of MDS cells through upregulation of Fas expression mediated by the NF-κB signaling pathway, suggesting a chemotherapeutic strategy for MDS by microtubule dynamics disruption.


SHR-1806, a robust OX40 agonist to promote T cell-mediated antitumor immunity

November 2024

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14 Reads

Anti-CTLA-4 and anti-PD-1/PD-L1 antibodies have significantly revolutionized cancer immunotherapy. However, the persistent challenge of low patient response rates necessitates novel approaches to overcome immune tolerance. Targeting immunostimulatory signaling may have a better chance of success for its ability to enhance effector T cell (Teff) function and expansion for antitumor immunity. Among various immunostimulatory pathways, the evidence underscores the potential of activating OX40-OX40L signaling to enhance CD8⁺ T cell generation and maintenance while suppressing regulatory T cells (Tregs) within the tumor microenvironment (TME). In this study, we introduce a potent agonistic anti-OX40 antibody, SHR-1806, designed to target OX40 receptors on activated T cells and amplify antitumor immune responses. SHR-1806 demonstrates a high affinity and specificity for human OX40 protein, eliciting FcγR-mediated agonistic effects, T cell activation, antibody-dependent cellular cytotoxicity (ADCC) and complement-dependent cytotoxicity (CDC) activities in vitro. In human OX40 knock-in mice bearing MC38 tumor, SHR-1806 shows a trend toward a higher potency than the reference anti-OX40 antibody produced in-house, GPX4, an analog of pogalizumab, the most advanced drug candidate developed by Roche. Furthermore, SHR-1806 displays promising anti-tumor activity alone or in combination with toll-like receptor 7 (TLR7) agonist or PD-L1 inhibitor in mouse models. Evaluation of SHR-1806 in rhesus monkeys indicates a favorable safety profile and typical pharmacokinetic characteristics. Thus, SHR-1806 emerges as a robust OX40 agonist with promising therapeutic potential.


Tripartite motif-containing protein 50 suppresses triple-negative breast cancer progression by regulating the epithelial–mesenchymal transition

November 2024

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16 Reads

Background and Objectives Tripartite motif-containing protein 50 (TRIM50) is a recently discovered E3 ubiquitin ligase that participates in tumor progression. TRIM50 is overexpressed in many cancers, although few studies focused on TRIM50‘s role in breast cancer. Methods We overexpressed TRIM50 in triple-negative breast cancer cell lines using plasmid and found that TRIM50 upregulation markedly reduced breast cancer cell proliferation, clone formation, and migration, as well as promoted breast cancer cell apoptosis. Western blotting revealed that accumulated TRIM50 resulted in both mRNA and protein depletion of SNAI1, and partially attenuated the epithelial–mesenchymal transition (EMT) induced by SNAI1. Results In this study, we demonstrate that TRIM50 is downregulated in human breast cancer and that its overexpression closely correlates with diminished invasion capacity in breast cancer, suggesting that TRIM50 may serve as a diagnostic marker and therapeutic target. Conclusion TRIM50 plays a key role in breast cancer proliferation and potentially serves as a prognostic and therapeutic target.


A positive feedback loop of SRSF9/USP22/ZEB1 promotes the progression of ovarian cancer

November 2024

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1 Read

Ovarian cancer (OC) is recognized as the most lethal type of gynecological malignancy, making treatment options challenging. Discovering novel therapeutic targets will benefit OC patients. This study aimed to reveal the mechanism by which SRSF9 regulates OC progression. Cell proliferation was determined via CCK-8 assays, whereas cell migration and invasion were monitored via Transwell assays. Western blotting and qPCR assays were used to detect protein and mRNA alterations. RNA pull-down, RNA immunoprecipitation (RIP), and actinomycin D experiments were performed to investigate the relationships between SRSF9 and USP22. Co-IP was used to validate the interaction between USP22 and ZEB1. Chromatin immunoprecipitation (ChIP) and dual-luciferase reporter assays were used to verify the regulatory effect of ZEB1 on the transcription of SRSF9. Subcutaneous xenograft models were established to evaluate the impact of SRSF9 on tumor development. Knockdown of SRSF9 significantly suppressed the proliferation, invasion, migration, tumorigenicity, and epithelial‒mesenchymal transition (EMT) of OC cells. SRSF9 can bind to USP22 mRNA, increasing its stability. Moreover, the overexpression of USP22 reversed the impact of SRSF9 silencing on malignant phenotypes. USP22 can mediate the deubiquitination of ZEB1, thereby enhancing the progression of OC. Furthermore, ZEB1 upregulated SRSF9 expression through transcriptional activation, thus establishing a positive feedback loop. SRSF9 enhanced the malignant characteristics of OC through a positive feedback loop of SRSF9/USP22/ZEB1. This functional circuit may help in the development of novel therapeutic approaches for treating OC.


PPIase cyclophilin-type domain of human cyclophilins and 3D structure of CypA. (a) PPIase cyclophilin-type domain of cyclophilins. (b) The 3D structure of CyPA features with eight β-strands and two α-helices. The key catalytic residues, arginine 55 (R55), glutamine 63 (Q63) and asparagine 102 (N102), are labeled.
Structure, biological functions and interaction of CypA and CD147. Intracellular CypA is secreted to extracellular environments when induced by cellular injury, and it plays a vital role in protein folding, trafficking, T-cell activation and cell signaling. CD147, which serves as the membrane receptor of CypA, consists of two extracellular ig domains, IgC2 (colored in pink) and IgI (colored in cyan), a single transmembrane domain, and a short cytoplasmic domain. Extracellular CypA binds to the amino acid proline 180 (P180) of CD147 and induces signal transduction through subsequent interaction with proline 211 (P211). Major cancer-related signaling pathways regulated by CypA/CD147 are shown in the figure. Glutamic acid 208 (E208) of the CD147 transmembrane domain is also important for the signaling response.
Chemical structure of compounds as CypA inhibitors. CsA and its derivatives, including alisporivir, NIM811, SCY-635 and CRV431 are on the top, C9, SFA, NV651 and Melittin are on the bottom.
Cyclophilin A: promising target in cancer therapy

November 2024

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14 Reads

Cyclophilin A (CypA), a member of the immunophilin family, stands out as the most prevalent among the cyclophilins found in humans. Beyond serving as the intracellular receptor for the immunosuppressive drug cyclosporine A (CsA), CypA exerts critical functions within the cell via its peptidyl-prolyl cis-trans isomerase (PPIase) activity, which is crucial for processes, such as protein folding, trafficking, assembly, modulation of immune responses, and cell signaling. Increasing evidence indicates that CypA is up-regulated in a variety of human cancers and it may be a novel potential therapeutic target for cancer treatment. Therefore, gaining a thorough understanding of CypA’s contribution to cancer could yield fresh perspectives and inform the development of innovative therapeutic approaches. This review delves into the multifaceted roles of CypA in cancer biology and explores the therapeutic potential of targeting CypA.


The polymeric fluoropyrimidine CF10 overcomes limitations of 5-FU in pancreatic ductal adenocarcinoma cells through increased replication stress

November 2024

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11 Reads

Pancreatic ductal adenocarcinoma (PDAC) is a lethal disease soon to become the second leading cause of cancer deaths in the US. Beside surgery, current therapies have narrow clinical benefits with systemic toxicities. FOLFIRINOX is the current standard of care, one component of which is 5- Fluorouracil (5-FU), which causes serious gastrointestinal and hematopoietic toxicities and is vulnerable to resistance mechanisms. Recently, we have developed polymeric fluoropyrimidines (F10, CF10) which unlike 5-FU, are, in principle, completely converted to the thymidylate synthase inhibitory metabolite FdUMP, without generating appreciable levels of ribonucleotides that cause systemic toxicities while displaying much stronger anti-cancer activity. Here, we confirm the potency of CF10 and investigate enhancement of its efficacy through combination with inhibitors in vitro targeting replication stress, a hallmark of PDAC cells. CF10 is 308-times more potent as a single agent than 5-FU and was effective in the nM range in primary patient derived models. Further, we find that activity of CF10, but not 5-FU, is enhanced through combination with inhibitors of ATR and Wee1 that regulate the S and G2 DNA damage checkpoints and can be reversed by addition of dNTPs indicative of CF10 acting, at least in part, through inducing replication stress. Our results indicate CF10 has the potential to supersede the established benefit of 5-FU in PDAC treatment and indicate novel combination approaches that should be validated in vivo and may be beneficial in established regimens that include 5-FU.


Extracellular vesicle-packaged miR-4253 secreted by cancer-associated fibroblasts facilitates cell proliferation in gastric cancer by inducing macrophage M2 polarization

November 2024

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9 Reads

Cancer-associated fibroblasts (CAFs) can interact with macrophages in the tumor microenvironment by secreting extracellular vesicles (EVs), thereby affecting tumor progression. However, the mechanisms of CAF-secreted EVs in gastric cancer (GC) remain not well understood. Here, we investigated the effect of CAF-EVs on macrophage polarization in GC and the underlying mechanisms. Macrophage polarization was evaluated using flow cytometry and quantitative real-time polymerase chain reaction. GC cell proliferation was determined using cell counting kit-8, EdU, and colony formation assays. The molecular mechanism was explored using microarray analysis, dual-luciferase reporter assay, and RNA pull-down analysis. The results showed that CAFs secreted EVs that inhibit macrophage M1 polarization and promote M2 polarization. Moreover, miR-4253 expression was increased in CAF-EVs, and inhibition of miR-4253 reversed the macrophage polarization induced by EVs. IL6R was identified as the target of miR-4253. Additionally, macrophages treated with EVs that encapsulated miR-4253 promote GC cell proliferation. In conclusion, CAF-secreted EVs packaging miR-4253 facilitate macrophage polarization from M1 to M2 phenotype by targeting IL6R, thereby accelerating GC cell proliferation. The findings suggest that EV-encapsulated miR-4253 may be a promising therapeutic target of GC.


TM4SF4 is a diagnostic biomarker accelerating progression of papillary thyroid cancer via AKT pathway

November 2024

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2 Reads

The incidence of papillary thyroid cancer (PTC) has been steadily rising, though the underlying mechanism remains unclear. This study aims to elucidate the biological role of TM4SF4 in the PTC progression. Our differential expression analysis indicated that TM4SF4 was significantly upregulated in PTC, which was corroborated in both our local cohort and the data from Human Protein Atlas. Additionally, clinical characteristics analysis and receiver operating characteristic curves (ROC) demonstrated that TM4SF4 served as a significant diagnostic marker for PTC. Correlation and enrichment analysis of TM4SF4-related partners suggested that it was involved in cell junction and cohesion processes. Furthermore, immune infiltration analysis revealed a positive correlation between TM4SF4 expression and the immune activation in PTC. Importantly, in vitro experiments demonstrated that TM4SF4 downregulation suppressed the proliferation and metastasis of PTC cell lines while inducing apoptosis. We further discovered that the AKT activator SC79 was able to reverse the malignant behaviors suppression caused by TM4SF4 knockdown, suggesting that TM4SF4 may promote PTC progression via the AKT pathway. In conclusion, our study highlights the oncogenic role of TM4SF4 in PTC and identifies it as a novel biomarker for diagnosis and treatment.


GdX inhibits the occurrence and progression of breast cancer by negatively modulating the activity of STAT3

November 2024

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6 Reads

Aim To elucidate the biological functionality and regulatory mechanisms of GdX in breast cancer (BC). Methods The examination of GdX expression in human BC tissues and cell lines was conducted through immunohistochemical (IHC) and Western blot. Cell proliferation capacity was assessed via the CCK-8 and colony formation assay, while cell migration was determined through the wound healing assay. The expression levels of BCL-XL, Cyclin D1, and C-myc gene were quantified using RT-qPCR and Western blot. In vivo tumor growth was evaluated in nude mice xenografted with MDA-MB-231 cells overexpressing GdX, and a mouse model with GdX-deficient BC was established to observe the impact of GdX on BC formation and metastasis. Dual-luciferase reporter assay and immunofluorescence were employed to confirm the interaction between GdX and STAT3. Western blot was employed to validate the influence of GdX overexpression on the phosphorylation process of STAT3. Results GdX exhibited low expression in the cancer tissues of BC patients and cell lines. MDA-MB-231 and MCF-7 cells overexpressing GdX displayed a notable reduction in proliferation and diminished migratory capabilities, accompanied by downregulated mRNA and protein expression of BCL-XL, Cyclin D1, and C-myc. In the xenograft mouse model, heightened GdX expression correlated with a decelerated in vivo tumor growth. Furthermore, in mice deteleing GdX, both the quantity and weight of tumors increased, along with evident pulmonary metastasis. Mechanistically, STAT3 emerged as a downstream target gene of GdX. Conclusions GdX exerts its inhibitory effects on the initiation and progression of BC by negatively modulating the phosphorylation of STAT3.


CONSORT diagram.
Efficacy outcomes.
Efficacy outcomes grouped by surgery and non-surgery. (a) event-free survival, (b) overall survival.
S-1-based concurrent chemoradiotherapy plus nimotuzumab in patients with locally advanced esophageal squamous cell carcinoma who failed neoadjuvant therapy: a real-world prospective study

October 2024

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7 Reads

Purpose This prospective study in a real-world setting investigated the feasibility and safety of S-1 plus nimotuzumab (S-1-Nimo) based concurrent chemoradiotherapy (CCRT) in locally advanced esophageal squamous cell carcinoma (LA-ESCC) patients who failed to neoadjuvant chemotherapy or chemoimmunotherapy. Methods LA-ESCC patients who failed to converse to resectable disease after neoadjuvant chemotherapy or chemoimmunotherapy were enrolled to receive the 4-week S-1-Nimo regimen of radiotherapy (40 Gy in 20 fractions, 5 days per week), S-1 chemotherapy, and nimotuzumab. Then, after surgical assessments, patients evaluated as resectable disease received surgery; patients with unresectable disease continued to receive definitive radiotherapy (50–60 Gy in 25–30 fractions, 5 days per week) concurrently with S-1-Nimo. The primary endpoint was event-free survival (EFS). Results Sixty-four patients were enrolled and evaluated. The median follow-up time was 23.2 months. Median EFS was 9.6 (95% confidence interval [CI], 7.1–14.0) months, with an estimated 2-year EFS rate of 24.2%. The median overall survival (OS) and the estimated OS rate at 2 years were 13.4 (95% CI, 10.3–17.5) months and 31.2%, respectively. Twelve underwent surgery, with a surgical conversion rate of 18.8% and an R0 resection rate of 100.0%. Subgroup analysis identified the significantly prolonged EFS and OS in patients who experienced radical surgery (median EFS, not reached vs. 8.7 months; p = .0117. median OS, 24.9 vs. 10.6 months; p = .0205) as compared to those treated with CCRT. Of 64 patients, grade 3 adverse events mainly included radiation esophagitis (4.7%), anemia (1.6%), and thrombocytopenia (1.6%). Conclusion The study demonstrated the reasonable efficacy and promising safety of the S-1-Nimo-based CCRT in LA-ESCC patients with failure to neoadjuvant chemotherapy or chemoimmunotherapy.


DLAT promotes triple-negative breast cancer progression via YAP1 activation

October 2024

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14 Reads

Background Breast cancer (BC) is the most prevalent malignant tumor in women globally. Triple-negative breast cancer (TNBC) represents the most malignant and invasive subtype of BC. New therapeutic targets are urgently needed for TNBC owing to its receptor expression characteristics, which render it insensitive to traditional targeted and endocrine therapies for BC. The role and mechanisms of dihydrolipoamide S-acetyltransferase (DLAT) as a crucial molecule in glycometabolism and cuproptosis-related biological processes in tumors remain to be explored. Methods DLAT expression was investigated using bioinformatics methods and quantitative real-time polymerase chain reaction. Subsequently, the MTT assay, colony formation assay, and migration-invasion assay were performed to validate the effect of DLAT on TNBC cell viability, proliferation, and migration. Cytoplasmic-nuclear separation experiments, western blot analysis, and co-immunoprecipitation assays were performed to elucidate the underlying molecular mechanisms. Results This study revealed a robust correlation between elevated DLAT expression in BC and unfavorable prognosis in patients, with higher expression of DLAT compared to other subtypes in TNBC. Functional cytology experiments indicated that DLAT plays a tumor-promoting role in TNBC. Mechanistic studies showed that DLAT directly interacts with YAP1, leading to the dephosphorylation and activation of YAP1 and its increased nuclear translocation, thereby transcriptionally activating and regulating downstream oncogenes, promoting the malignant phenotype of TNBC. Rescue experiments indicated that DLAT promotes the malignant behavior of TNBC through a YAP1-dependent pathway. Conclusions Our research unveiled the significant involvement of DLAT in TNBC, along with the potential for modulating DLAT/YAP1 activity as a targeted treatment strategy for TNBC.


NRF3 suppresses the malignant progression of TNBC by promoting M1 polarization of macrophages via ROS/HMGB1 axis

October 2024

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2 Reads

Background Triple-negative breast cancer (TNBC) is a highly aggressive form of breast cancer. Due to its lack of targeted therapy options, TNBC remains a significant clinical challenge. In this study, we investigated the role of nuclear respiratory factor 3 (NRF3) and high-mobility group box 1 (HMGB1) in the progression of TNBC. Methods The study analyzed NRF3’s clinical expression, differentially expressed genes (DEGs), and immune infiltration in TNBC using the TCGA database and bioinformatics tools. Cellular functions of MDA-MB-468 and Hs578t cells were evaluated through MTT, colony formation, transwell, flow cytometry, and western blotting. The regulatory function of NRF3 in TNBC cell lines was assessed using Immunofluorescence, Immunohistochemistry, qRT-PCR, CHIP, luciferase assay, and ELISA. Moreover, a xenograft model was established to investigate the role of NRF3 in TNBC in vivo. Results Low expression of NRF3 in TNBC tumors was associated with unfavorable prognosis and transcripts from tumors with higher NRF3 levels were enriched in oxidative stress and immune-related pathways. The subsequent gain- and loss-functional experiments indicated that NRF3 overexpression significantly suppressed malignant phenotypes, MAPK/ERK signaling pathways, and epithelial-mesenchymal transition (EMT), whereas it promoted reactive oxygen species (ROS) levels in TNBC. Further mechanistic exploration showed that NRF3 inhibited TNBC cell function by regulating oxidative stress-related genes to inhibit the MAPK/ERK signaling pathway by promoting the release of HMGB1 via ROS, thereby promoting M1 macrophage polarization. Conclusion NRF3 promotes M1 macrophage polarization through the ROS/HMGB1 axis, thereby inhibiting the malignant progression of TNBC. It is expected to become a therapeutic biomarker for TNBC.


FASN contributes to ADM resistance of diffuse large B-cell lymphoma by inhibiting ferroptosis via nf-κB/STAT3/GPX4 axis

September 2024

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8 Reads

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1 Citation

Drug resistance is a critical impediment to efficient therapy of diffuse large B-cell lymphoma (DLBCL) patients. Recent studies have highlighted the association between ferroptosis and drug resistance that has been reported. Fatty acid synthase (FASN) is always related to a poor prognosis. In this study, we investigate the impact of FASN on drug resistance in DLBCL and explore its potential modulation of ferroptosis mechanisms. The clinical correlation of FASN mRNA expression was first analyzed to confirm the role of FASN on drug resistance in DLBCL based on the TCGA database. Next, the impact of FASN on ferroptosis was investigated in vitro and in vivo. Furthermore, a combination of RNA-seq, western blot, luciferase reporter, and ChIP experiments was employed to elucidate the underlying mechanism. The prognosis for patients with DLBCL was worse when FASN was highly expressed, particularly in those undergoing chemotherapy for Adriamycin (ADM). FASN promoted tumor growth and resistance of DLBCL to ADM, both in vitro and in vivo. It is noteworthy that this effect was achieved by inhibiting ferroptosis, since Fer-1 (a ferroptosis inhibitor) treatment significantly recovered the effects of silencing FASN on inhibiting ferroptosis, while Erastin (a ferroptosis inducer) treatment attenuated the impact of overexpressing FASN. Mechanistically, FASN activated NF-κB/STAT3 signaling pathway through phosphorylating the upstream IKKα and IκBα, and the activated STAT3 promoted GPX4 expression by directly binding to GPX4 promoter. FASN inhibits ferroptosis in DLBCL via NF-κB/STAT3/GPX4 signaling pathway, indicating its critical role in mediating ADM resistance of DLBCL.


Arntl-induced upregulation of DUSP1 inhibits tumor progression in esophageal squamous cell carcinoma by inactivating ERK signaling

September 2024

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2 Reads

Background Esophageal squamous cell carcinoma (ESCC) is a primary histological type of esophageal carcinoma with high morbidity. Aryl hydrocarbon receptor nuclear translocator-like (ARNTL) is a circadian clock gene associated with the progression of multiple tumors. However, its roles and mechanisms in ESCC remain unknown. Methods ARNTL expression was analyzed using TCGA database and detected using qRT-PCR, and ARNTL-related pathways were analyzed through GSEA. Cell functional behaviors were assessed in vitro by measuring cell viability, proliferation, and apoptosis. Cell growth in the murine model was investigated through xenograft model and immunofluorescence assays of PCNA and Ki67. The downstream targets of ARNTL were analyzed through sequencing and identified via luciferase report, ChIP, and RNA pull-down analyses. Dual-specificity protein phosphatase-1 (DUSP1) expression was analyzed using GEO datasets and measured using qRT-PCR and western blotting. Protein expression was examined via western blotting. Results ARNTL expression was decreased in esophageal carcinoma and associated with histological types, and elevated expression of ARNTL repressed ESCC cell viability and proliferation and facilitated cell apoptosis. ARNTL upregulation reduced tumor cell growth in murine models and decreased PCNA and Ki67 levels. Furthermore, DUSP1 was downregulated upon ARNTL silencing in ESCC. ARNTL could bind and positively regulate DUSP1 transcription. Additionally, DUSP1 silencing reversed the influences of ARNTL upregulation on cell viability, proliferation, and apoptosis in ESCC cells. ARNTL attenuated the activation of the ERK signaling by decreasing ERK phosphorylation through upregulation of DUSP1. Conclusion ARNTL hinders cell growth and contributes to cell apoptosis by inactivating ERK signaling through transcriptional upregulation of DUSP1 in ESCC.


CD8α Structural Domains Enhance GUCY2C CAR-T Cell Efficacy

September 2024

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39 Reads

Despite success in treating some hematological malignancies, CAR-T cells have not yet produced similar outcomes in solid tumors due, in part, to the tumor microenvironment, poor persistence, and a paucity of suitable target antigens. Importantly, the impact of the CAR components on these challenges remains focused on the intracellular signaling and antigen-binding domains. In contrast, the flexible hinge and transmembrane domains have been commoditized and are the least studied components of the CAR. Here, we compared the hinge and transmembrane domains derived from either the CD8ɑ or CD28 molecule in identical GUCY2C-targeted third-generation designs for colorectal cancer. While these structural domains do not contribute to differences in antigen-independent contexts, such as CAR expression and differentiation and exhaustion phenotypes, the CD8ɑ structural domain CAR has a greater affinity for GUCY2C. This results in increased production of inflammatory cytokines and granzyme B, improved cytolytic effector function with low antigen-expressing tumor cells, and robust anti-tumor efficacy in vivo compared with the CD28 structural domain CAR. This suggests that CD8α structural domains should be considered in the design of all CARs for the generation of high-affinity CARs and optimally effective CAR-T cells in solid tumor immunotherapy.


Navigating precision: the crucial role of next-generation sequencing recurrence risk assessment in tailoring adjuvant therapy for hormone receptor-positive, human epidermal growth factor Receptor2-negative early breast cancer

September 2024

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8 Reads

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1 Citation

Hormone receptor-positive (HR+)/human epidermal growth factor receptor 2-negative (HER2−) breast cancer is the most common subtype, representing over two-thirds of new diagnoses. Adjuvant therapy, which encompasses various medications and treatment durations, is the standard approach for managing early stage HR+ HER2- breast cancer. Optimizing treatment is essential to minimize unnecessary side effects while addressing the biological variability inherent in HR+/HER2− breast cancers. Incorporating biological biomarkers into treatment decisions, alongside traditional clinical factors, is vital. Gene expression assays can identify patients unlikely to benefit from adjuvant chemotherapy, thereby refining treatment strategies and improving risk assessment. This paper reviews evidence for several genomic tests, including Oncotype DX, MammaPrint, Breast Cancer Index, RucurIndex, and EndoPredict, which assist in tailoring adjuvant therapy. Additionally, we explore the role of liquid biopsies in personalizing treatment, emphasizing the importance of considering late relapse risks and potential benefits of extended systemic therapy for HR+/HER2− breast cancer patients.


BM cells morphology, flow cytometric analysis and chromosomal analysis results for this patient. (a) Representative images of BM cells showing MM cell (black arrow) and mature lymphocyte (blue arrow). (b) Monoclonal CLL cells and MM cells were analyzed with flow cytometry. R8 showed the population of MM cells and R9 showed the population of CLL cells. (c) Chromosomal analysis results for this patient.
Tumor-related SNVs in LN and BM. (a) SNVs were shown in the venn. (b) GPRIN2, CNN2, ZNF717 and GXYLT1 gene were selected for visualization.
CNVs was displayed with circos plot and segments of chromosome 14 were selected to visualize. (a) CNVs in all chromosomes were shown with circus plot. Red lines represented amplification and blue lines represented the reduction of CNVs. (b) Chromosome 14 was visualized to show the reduction of CNVs in LN and BM samples.
WGS sequencing depth display in BCR IGHJ and IGHV rearrangement in LN and BM.
The schematic diagram of cellular origin of malignant cells from this patient.
Whole-genome sequencing reveals cellular origin of concomitant chronic lymphocytic leukemia and multiple myeloma: a case report

September 2024

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8 Reads

Chronic lymphocytic leukemia (CLL) and multiple myeloma (MM) are hematological disorders affecting B cells. The clonal relationship between CLL and MM has not always been clarified, although this information is critical to understanding its pathogenesis. Here, we present a rare clinical case of synchronous CLL and MM. Whole-genome sequencing (WGS) was performed using malignant lymph node (LN) and bone marrow (BM) tissues. Based on the high consistency of single nucleotide variants (SNVs), significantly mutated genes (SMGs), copy number variations (CNVs), different B cell receptor (BCR) IGH rearrangement features in LN and BM, and the different light-chain expression patterns in CLL and MM cells, we concluded that CLL and MM cells from this patient originated from the same hematopoietic stem cell/progenitors, different pro-B cells and suffered oncogenic mutations at different B cell differentiation stages. Depth analysis of genome features using WGS provides a new method to explore the process of malignant B cell genesis.


Journal metrics


3.6 (2022)

Journal Impact Factor™


9.8 (2022)

CiteScore™


0.866 (2022)

SNIP


0.996 (2022)

SJR

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