BMC Medicine

Published by Springer Nature

Online ISSN: 1741-7015

Disciplines: Medicine, Public Health

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Table 1 Characteristics of participants at baselinea
Table 2 Primary and secondary outcomes in the intervention group and the control group after 6 and 12 weeks a
Referred pain pattern (red) from supraspinatus muscle MTrP
The number of patients who improved by more than 10 points (minimal clinically important difference) on the DASH outcome measure after 12 weeks for the intervention group (n = 34) and the control group (n = 31).
Referred pain pattern (red) from infraspinatus muscle MTrP

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Treatment of myofascial trigger points in patients with chronic shoulder pain: A randomized, controlled trial

January 2011

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Aims and scope


BMC Medicine is an open access, open peer review medical journal publishing outstanding and influential research of broad interest to the biomedical and sociomedical professional communities. We cover all areas of clinical practice, translational medicine, medical and health advances, public health, global health, policy, and general topics of interest to our global readership. BMC Medicine's highly responsive team of professional editors ensure rigorous processes and rapid publication upon acceptance. We are dedicated to supporting our authors by providing global visibility, innovative formats, widespread promotion, and opportunities for impact on future research, practice, and policy. Ultimately, BMC Medicine is committed to inspiring progress on clinical and health outcomes for people worldwide.

Recent articles


The influence of explainable vs non-explainable clinical decision support systems on rapid triage decisions: a mixed methods study
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September 2023

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3 Reads

Background During the COVID-19 pandemic, a variety of clinical decision support systems (CDSS) were developed to aid patient triage. However, research focusing on the interaction between decision support systems and human experts is lacking. Methods Thirty-two physicians were recruited to rate the survival probability of 59 critically ill patients by means of chart review. Subsequently, one of two artificial intelligence systems advised the physician of a computed survival probability. However, only one of these systems explained the reasons behind its decision-making. In the third step, physicians reviewed the chart once again to determine the final survival probability rating. We hypothesized that an explaining system would exhibit a higher impact on the physicians’ second rating (i.e., higher weight-on-advice). Results The survival probability rating given by the physician after receiving advice from the clinical decision support system was a median of 4 percentage points closer to the advice than the initial rating. Weight-on-advice was not significantly different (p = 0.115) between the two systems (with vs without explanation for its decision). Additionally, weight-on-advice showed no difference according to time of day or between board-qualified and not yet board-qualified physicians. Self-reported post-experiment overall trust was awarded a median of 4 out of 10 points. When asked after the conclusion of the experiment, overall trust was 5.5/10 (non-explaining median 4 (IQR 3.5–5.5), explaining median 7 (IQR 5.5–7.5), p = 0.007). Conclusions Although overall trust in the models was low, the median (IQR) weight-on-advice was high (0.33 (0.0–0.56)) and in line with published literature on expert advice. In contrast to the hypothesis, weight-on-advice was comparable between the explaining and non-explaining systems. In 30% of cases, weight-on-advice was 0, meaning the physician did not change their rating. The median of the remaining weight-on-advice values was 50%, suggesting that physicians either dismissed the recommendation or employed a “meeting halfway” approach. Newer technologies, such as clinical reasoning systems, may be able to augment the decision process rather than simply presenting unexplained bias.
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Depiction of the sequence of the survey dates. After vaccination against SARS-CoV-2 or against one of the comparators, participants received an invitation to the short-term survey at 14 days latency, and an invitation to the long-term survey after a further 26 days. One hundred twenty-four days after vaccination, all participants received an invitation to the follow-up survey. Surveys included in the analysis are highlighted in blue, while those excluded from the analysis are highlighted in grey
Data selection and preparation process. If a person registered twice with the same email address, data sets were merged. If an email address was used by more than one participant, data records were considered separately. Batch numbers were checked for plausibility: surveys regarding vaccinations with invalid batch numbers were counted as missing; invalid batch number was defined as an unknown number or an incorrect combination of number and vaccine
Patient-reported reactogenicity and safety of COVID-19 vaccinations vs. comparator vaccinations: a comparative observational cohort study

September 2023

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34 Reads

Background In the course of the SARS-CoV-2 pandemic, multiple vaccines were developed. Little was known about reactogenicity and safety in comparison to established vaccines, e.g. influenza, pneumococcus, or herpes zoster. Therefore, the present study aimed to compare self-reported side effects in persons vaccinated against SARS-CoV-2 with the incidence of side effects in persons receiving one of the established vaccines. Methods A longitudinal observational study was conducted over a total of 124 days using web-based surveys. Persons receiving either a vaccination against SARS-CoV-2 or one of the established vaccines (comparator group) were included. In the first questionnaire (short-term survey), 2 weeks after vaccination, mainly local and systemic complaints were evaluated. The long-term survey (42 days after vaccination) and follow-up survey (124 weeks after vaccination) focused on medical consultations for any reason. Multivariate analyses were conducted to determine the influence of the vaccine type (SARS-CoV-2 vs. comparator) and demographic factors. Results In total, data from 16,636 participants were included. Self-reported reactogenicity was lowest in the comparator group (53.2%) and highest in the ChAdOx1 group (85.3%). Local reactions were reported most frequently after mRNA-1273 (73.9%) and systemic reactions mainly after vector-based vaccines (79.8%). Almost all SARS-CoV-2 vaccines showed increased odds of reporting local or systemic reactions. Approximately equal proportions of participants reported medical consultations. None in the comparator group suspected a link to vaccination, while this was true for just over one in 10 in the mRNA-1273 group. The multivariate analysis showed that people with SARS-CoV-2 vaccination were not more likely to report medical consultations; patients who had received a regimen with at least one ChAdOx1 were even less likely to report medical consultations. Younger age, female gender and higher comorbidity were mostly associated with higher odds of medical consultations. Conclusion The rate of adverse reactions after established vaccinations was roughly comparable to previous studies. Two weeks after vaccination, participants in the SARS-CoV-2 vaccination group reported more local and systemic local reactions than participants in the comparator group. In the further course, however, there were no higher odds of medical consultations in either of the two groups. Thus, altogether, we assume comparable safety. Trial registration DRKS-ID DRKS00025881 and DRKS-ID DRKS00025373.

Integrated unbiased multiomics defines disease-independent placental clusters in common obstetrical syndromes

September 2023

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31 Reads

Background Placental dysfunction, a root cause of common syndromes affecting human pregnancy, such as preeclampsia (PE), fetal growth restriction (FGR), and spontaneous preterm delivery (sPTD), remains poorly defined. These common, yet clinically disparate obstetrical syndromes share similar placental histopathologic patterns, while individuals within each syndrome present distinct molecular changes, challenging our understanding and hindering our ability to prevent and treat these syndromes. Methods Using our extensive biobank, we identified women with severe PE (n = 75), FGR (n = 40), FGR with a hypertensive disorder (FGR + HDP; n = 33), sPTD (n = 72), and two uncomplicated control groups, term (n = 113), and preterm without PE, FGR, or sPTD (n = 16). We used placental biopsies for transcriptomics, proteomics, metabolomics data, and histological evaluation. After conventional pairwise comparison, we deployed an unbiased, AI-based similarity network fusion (SNF) to integrate the datatypes and identify omics-defined placental clusters. We used Bayesian model selection to compare the association between the histopathological features and disease conditions vs SNF clusters. Results Pairwise, disease-based comparisons exhibited relatively few differences, likely reflecting the heterogeneity of the clinical syndromes. Therefore, we deployed the unbiased, omics-based SNF method. Our analysis resulted in four distinct clusters, which were mostly dominated by a specific syndrome. Notably, the cluster dominated by early-onset PE exhibited strong placental dysfunction patterns, with weaker injury patterns in the cluster dominated by sPTD. The SNF-defined clusters exhibited better correlation with the histopathology than the predefined disease groups. Conclusions Our results demonstrate that integrated omics-based SNF distinctively reclassifies placental dysfunction patterns underlying the common obstetrical syndromes, improves our understanding of the pathological processes, and could promote a search for more personalized interventions.

Flow diagram for study identification and selection
Caesarean delivery compared with vaginal delivery on offspring health outcomes
Distributions of estimates in the simulation study. The black dashed line indicates the “true effect” of caesarean delivery on offspring health that we set according to the results of our meta-analysis. “Cor” represents the correlation of maternal age at delivery between siblings
Association of caesarean delivery with offspring health outcomes in full-cohort versus sibling-comparison studies: a comparative meta-analysis and simulation study

September 2023

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12 Reads

Background Full-cohort and sibling-comparison designs have yielded inconsistent results about the impacts of caesarean delivery on offspring health outcomes, with the effect estimates from the latter being more likely directed towards the null value. We hypothesized that the seemingly conservative results obtained from the sibling-comparison design might be attributed to inadequate adjustment for non-shared confounders between siblings, particularly maternal age at delivery. Methods A systematic review and meta-analysis was first conducted. PubMed, Embase, and the Web of Science were searched from database inception to April 6, 2022. Included studies (1) examined the association of caesarean delivery, whether elective or emergency, with offspring health outcomes; (2) simultaneously conducted full-cohort and sibling-comparison analyses; and (3) reported adjusted effect estimates with 95% confidence intervals (95% CIs). No language restrictions were applied. Data were extracted by 2 reviewers independently. Three-level meta-analytic models were used to calculate the pooled odds ratios (ORs) and 95% CIs for caesarean versus vaginal delivery on multiple offspring health outcomes separately for full-cohort and sibling-comparison designs. Subgroup analyses were performed based on the method of adjustment for maternal age at delivery. A simulation study was then conducted. The simulated datasets were generated with some key parameters derived from the meta-analysis. Results Eighteen studies involving 21,854,828 individuals were included. The outcomes assessed included mental and behavioral disorders; endocrine, nutritional and metabolic diseases; asthma; cardiorespiratory fitness; and multiple sclerosis. The overall pooled OR for estimates from the full-cohort design was 1.14 (95% CI: 1.11 to 1.17), higher than that for estimates from the sibling-comparison design (OR = 1.08; 95% CI: 1.02 to 1.14). Stratified analyses showed that estimates from the sibling-comparison design varied considerably across studies using different methods to adjust for maternal age at delivery in multivariate analyses, while those from the full-cohort design were rather stable: in studies that did not adjust maternal age at delivery, the pooled OR of full-cohort vs. sibling-comparison design was 1.10 (95% CI: 0.99 to 1.22) vs. 1.06 (95% CI: 0.85 to 1.31), in studies adjusting it as a categorical variable, 1.15 (95% CI: 1.11 to 1.19) vs. 1.07 (95% CI: 1.00 to 1.15), and in studies adjusting it as a continuous variable, 1.12 (95% CI: 1.05 to 1.19) vs. 1.12 (95% CI: 0.98 to 1.29). The severe underestimation bias related to the inadequate adjustment of maternal age at delivery in sibling-comparison analyses was fully replicated in the simulation study. Conclusions Sibling-comparison analyses may underestimate the association of caesarean delivery with multiple offspring health outcomes due to inadequate adjustment of non-shared confounders, such as maternal age at delivery. Thus, we should be cautious when interpreting the seemingly conservative results of sibling-comparison analyses in delivery-related studies.

Flow chart of included abstracts. PK, pharmacokinetic
Histogram of AUC mean values (top panel) and residuals from a smooth fit to the histogram (bottom panel). The dotted line in the top panel shows the smooth fit
Histogram of the largest AUC mean value per abstract (top panel) and residuals from a smooth fit to the histogram (bottom panel). The dotted line in the top panel shows the smooth fit
Evidence of questionable research practices in clinical prediction models

September 2023

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21 Reads

Background Clinical prediction models are widely used in health and medical research. The area under the receiver operating characteristic curve (AUC) is a frequently used estimate to describe the discriminatory ability of a clinical prediction model. The AUC is often interpreted relative to thresholds, with “good” or “excellent” models defined at 0.7, 0.8 or 0.9. These thresholds may create targets that result in “hacking”, where researchers are motivated to re-analyse their data until they achieve a “good” result. Methods We extracted AUC values from PubMed abstracts to look for evidence of hacking. We used histograms of the AUC values in bins of size 0.01 and compared the observed distribution to a smooth distribution from a spline. Results The distribution of 306,888 AUC values showed clear excesses above the thresholds of 0.7, 0.8 and 0.9 and shortfalls below the thresholds. Conclusions The AUCs for some models are over-inflated, which risks exposing patients to sub-optimal clinical decision-making. Greater modelling transparency is needed, including published protocols, and data and code sharing.

Targeted delivery of a PD-1-blocking scFv by CD133-specific CAR-T cells using nonviral Sleeping Beauty transposition shows enhanced antitumour efficacy for advanced hepatocellular carcinoma

August 2023

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20 Reads

Background CD133 is considered a marker for cancer stem cells (CSCs) in several types of tumours, including hepatocellular carcinoma (HCC). Chimeric antigen receptor-specific T (CAR-T) cells targeting CD133-positive CSCs have emerged as a tool for the clinical treatment of HCC, but immunogenicity, the high cost of clinical-grade recombinant viral vectors and potential insertional mutagenesis limit their clinical application. Methods CD133-specific CAR-T cells secreting PD-1 blocking scFv (CD133 CAR-T and PD-1 s cells) were constructed using a sleeping beauty transposon system from minicircle technology, and the antitumour efficacy of CD133 CAR-T and PD-1 s cells was analysed in vitro and in vivo. Results A univariate analysis showed that CD133 expression in male patients at the late stage (II and III) was significantly associated with worse progression-free survival (PFS) (P = 0.0057) and overall survival (OS) (P = 0.015), and a multivariate analysis showed a trend toward worse OS (P = 0.041). Male patients with advanced HCC exhibited an approximately 20-fold higher PD-L1 combined positive score (CPS) compared with those with HCC at an early stage. We successfully generated CD133 CAR-T and PD-1 s cells that could secrete PD-1 blocking scFv based on a sleeping beauty system involving minicircle vectors. CD133 CAR-T and PD-1 s cells exhibited significant antitumour activity against HCC in vitro and in xenograft mouse models. Thus, CD133 CAR-T and PD-1 s cells may be a therapeutically tractable strategy for targeting CD133-positive CSCs in male patients with advanced HCC. Conclusions Our study provides a nonviral strategy for constructing CAR-T cells that could also secrete checkpoint blockade inhibitors based on a Sleeping Beauty system from minicircle vectors and revealed a potential benefit of this strategy for male patients with advanced HCC and high CD133 expression (median immunohistochemistry score > 2.284).

CONSORT flow diagram for the study
Comparison of myocardial flow outcomes at baseline and the 6-month follow-up evaluation. a There was no significant difference in the rest myocardial blood flow (MBF) between groups at baseline and 6 months; however, a significant change from baseline at 6 months was observed in the chronic remote ischemic conditioning (CRIC) group. b There was no significant difference in stress MBF between the groups at baseline; however, at 6 months, the CRIC group had significantly higher stress MBF and a greater change from baseline than the control group. c There was no significant difference in myocardial flow reserve (MFR) between groups at baseline; however, the CRIC group had a significantly higher MFR and greater change from baseline than the control group at 6 months. d There was no significant difference in reversible myocardial ischemia extent (RMIE) between the groups at baseline; however, the RMIE was significantly lower in the CRIC group than in the control group at 6 months. The CRIC group showed a greater change from baseline than the control group at 6 months
The chronic remote ischemic conditioning (CRIC) showed a significant overall improvement in self-reported symptoms according to the Canadian Cardiovascular Society (CCS) with a change in the composition ratio of the different classifications at the time of follow-up
Changes in the five dimensions of the Seattle Angina Questionnaire (SAQ) score at baseline and follow-up. The chronic remote ischemic conditioning (CRIC) group patients had improved scores in all five dimensions
Chronic remote ischemic conditioning treatment in patients with chronic stable angina (EARLY-MYO-CSA): a randomized, controlled proof-of-concept trial

August 2023

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13 Reads

Background Chronic remote ischemic conditioning (CRIC) has been shown to improve myocardial ischemia in experimental animal studies; however, its effectiveness in patients with chronic stable angina (CSA) has not been investigated. We conducted a proof-of-concept study to investigate the efficacy and safety of a six-month CRIC treatment in patients with CSA. Methods The EARLY-MYO-CSA trial was a prospective, randomized, controlled trial evaluating the CRIC treatment in patients with CSA with persistent angina pectoris despite receiving ≥ 3-month guideline-recommended optimal medical therapy. The CRIC and control groups received CRIC (at 200 mmHg) or sham CRIC (at 60 mmHg) intervention for 6 months, respectively. The primary endpoint was the 6-month change of myocardial flow reserve (MFR) on single-photon emission computed tomography. The secondary endpoints were changes in rest and stress myocardial blood flow (MBF), angina severity according to the Canadian Cardiovascular Society (CCS) classification, the Seattle Angina Questionnaire (SAQ), and a 6-min walk test (6-MWT). Results Among 220 randomized CSA patients, 208 (105 in the CRIC group, and 103 in the control group) completed the treatment and endpoint assessments. The mean change in MFR was significantly greater in the CRIC group than in the control group (0.27 ± 0.38 vs. − 0.04 ± 0.25; P < 0.001). MFR increased from 1.33 ± 0.48 at baseline to 1.61 ± 0.53 (P < 0.001) in the CRIC group; however, a similar increase was not seen in the control group (1.35 ± 0.45 at baseline and 1.31 ± 0.44 at follow-up, P = 0.757). CRIC treatment, when compared with controls, demonstrated improvements in angina symptoms assessed by CCS classification (60.0% vs. 14.6%, P < 0.001), all SAQ dimensions scores (P < 0.001), and 6-MWT distances (440 [400–523] vs. 420 [330–475] m, P = 0.016). The incidence of major adverse cardiovascular events was similar between the groups. Conclusions CSA patients benefit from 6-month CRIC treatment with improvements in MFR, angina symptoms, and exercise performance. This treatment is well-tolerated and can be recommended for symptom relief in this clinical population. Trial registration [chictr.org.cn], identifier [ChiCTR2000038649].

Preferred Reporting Items for Systematic Reviews and Meta-Analyses flow diagram for selection of studies. WOS Web of Science, CENTRAL Cochrane Central Register of Controlled Trials, PEDro Physiotherapy Evidence Database, CINAHL Cumulative Index to Nursing and Allied Health Literature, CNKI China National Knowledge Internet, VIP VIP database, CBM China Biology Medicine database, WanFang Wanfang database, RCT randomized controlled trial, VRT vestibular rehabilitation therapy, UR usual rehabilitation
Meta-analysis of VRT on balance (A–D). VRT vestibular rehabilitation therapy, UR usual rehabilitation, BBS Berg balance scale
Meta-analysis of various types and intervention duration of VRT on balance (A–B). VRT vestibular rehabilitation therapy, UR usual rehabilitation, GSE gaze stability exercises
Meta-analysis of VRT on gait (A–F). VRT vestibular rehabilitation therapy, UR usual rehabilitation, TUG timed up-and-go test, SL step length, ST stance phase, SW swing phase, AS affected side, 10MWT 10-m walking test
Vestibular rehabilitation therapy on balance and gait in patients after stroke: a systematic review and meta-analysis

August 2023

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39 Reads

Background There is limited evidence to support the use of vestibular rehabilitation therapy (VRT) on improving balance and gait in patients after stroke. This systematic review aimed to evaluate the effects of VRT in addition to usual rehabilitation compared with usual rehabilitation on improving balance and gait for patients after stroke. Methods This review followed the Preferred Reporting Items for Systematic reviews and Meta-Analysis statement guidelines. Ten electronic databases were searched up to 1 June 2023 without restrictions in language and publication status. The PEDro scale and the Grading of Recommendations Assessment Development, and Evaluation were used to evaluate the risk of bias and the certainty of evidence. The meta-analysis was conducted with Review Manager 5.3. Results Fifteen randomised controlled trials with 769 participants were included. PEDro scale was used to assess the risk of bias with a mean score of 5.9 (0.7). VRT was effective in improving balance for patients after stroke (SMD = 0.59, 95% CI (0.40, 0.78), p < 0.00001), particularly for patients after stroke that occurred within 6 months (SMD = 0.56, 95% CI (0.33, 0.79), p < 0.00001) with moderate certainty of evidence. Subgroup analysis showed that VRT provided as gaze stability exercises combined with swivel chair training (SMD = 0.85, 95% CI (0.48, 1.22), p < 0.00001) and head movements (SMD = 0.75, 95% CI (0.43, 1.07), p < 0.00001) could significantly improve balance. Four-week VRT had better effect on balance improvement (SMD = 0.64, 95% CI (0.40, 0.89), p < 0.00001) than the less than 4-week VRT. The pooled mean difference of values of Timed Up-and-Go test showed that VRT could significantly improve gait function for patients after stroke (MD = −4.32, 95% CI (−6.65, −1.99), p = 0.0003), particularly for patients after stroke that occurred within 6 months (MD = −3.92, 95% CI (−6.83, −1.00), p = 0.008) with moderate certainty of evidence. Conclusions There is moderate certainty of evidence supporting the positive effect of VRT in improving balance and gait of patients after stroke. Trial registration PROSPERO CRD42023434304

Annual cases, hospitalizations, and deaths between 2025 and 2033 under varying vaccination coverages in three transmission scenarios and three immune durations. The current vaccination coverage is 49%. The treatment coverage through the entire period is 13.7%
Annual cases, hospitalizations, and deaths between 2025 and 2033 under varying treatment coverage in three transmission scenarios and three immune durations. The current treatment coverage is 13.7%. The vaccination coverage through the entire period is 49%
Mean annual deaths (in thousands) between 2025 and 2033 under various combinations of vaccination and treatment coverage. Three rates of immune waning are considered: 365 days (top), 548 days (middle), and 730 days (bottom). The outlined cell represents the treatment and vaccination coverages closest to observed levels (49% vaccine coverage, 13.7% treatment coverage)
Estimated annual burden between 2025 and 2033 under 548-day immunity waning if implementing the current vaccination and treatment coverages of 50 states nationally (black dots). Contour lines show 10,000 and 50,000 annual deaths, representing the highest and lowest death counts from recently observed influenza seasons
Annual burden across all ages between 2025 and 2033 given age-specific vaccination when immune duration is 548-day. The targeted age group (on x-axis) has 25% higher vaccination coverage than the vaccination coverage applied on other age groups. The current vaccination coverage is 49%. The treatment coverage through the entire period is 13.7%
Benefits of near-universal vaccination and treatment access to manage COVID-19 burden in the United States

August 2023

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15 Reads

Background As we continue the fourth year of the COVID-19 epidemic, SARS-CoV-2 infections still cause high morbidity and mortality in the United States. During 2020–2022, COVID-19 was one of the leading causes of death in the United States and by far the leading cause among infectious diseases. Vaccination uptake remains low despite this being an effective burden reducing intervention. The development of COVID-19 therapeutics provides hope for mitigating severe clinical outcomes. This modeling study examines combined strategies of vaccination and treatment to reduce the burden of COVID-19 epidemics over the next decade. Methods We use a validated mathematical model to evaluate the reduction of incident cases, hospitalized cases, and deaths in the United States through 2033 under various levels of vaccination and treatment coverage. We assume that future seasonal transmission patterns for COVID-19 will be similar to those of influenza virus and account for the waning of infection-induced immunity and vaccine-induced immunity in a future with stable COVID-19 dynamics. Due to uncertainty in the duration of immunity following vaccination or infection, we consider three exponentially distributed waning rates, with means of 365 days (1 year), 548 days (1.5 years), and 730 days (2 years). We also consider treatment failure, including rebound frequency, as a possible treatment outcome. Results As expected, universal vaccination is projected to eliminate transmission and mortality. Under current treatment coverage (13.7%) and vaccination coverage (49%), averages of 81,000–164,600 annual reported deaths, depending on duration of immunity, are expected by the end of this decade. Annual mortality in the United States can be reduced below 50,000 per year with 52–80% annual vaccination coverage and below 10,000 annual deaths with 59–83% annual vaccination coverage, depending on duration of immunity. Universal treatment reduces hospitalizations by 88.6% and deaths by 93.1% under current vaccination coverage. A reduction in vaccination coverage requires a comparatively larger increase in treatment coverage in order for hospitalization and mortality levels to remain unchanged. Conclusions Adopting universal vaccination and universal treatment goals in the United States will likely lead to a COVID-19 mortality burden below 50,000 deaths per year, a burden comparable to that of influenza virus.


Adjusted odds ratios for 12-month mortality. Odds ratios for 12-month mortality in people with 4 + versus 0 conditions, adjusted for age, sex, and deprivation status. Ninety-five percent confidence intervals are represented by error bars
Forest plot of primary care to hospital inpatient data prevalence ratios. Prevalence ratios are calculated by dividing prevalence using only primary care (PC) data by prevalence using only hospital inpatient (HI) data: PC/HI ratio. Error bars represent 95% confidence intervals. The vertical dotted line represents where the PC/HI ratio is 1, meaning the prevalence rate is the same using both PC and HI data. Where the ratio is > 1, the prevalence was higher using PC versus HI data. Conversely, a ratio < 1 represents conditions where prevalence is higher using HI versus PC data. Conditions are grouped by ICD-10 chapter
Venn diagrams of concordance between data sources for 47 long-term conditions by ICD-10 body system. Red represents people identified as having each condition in primary care (PC) and blue represents people identified in hospital inpatient (HI) datasources. Area of cross-over represents individuals identified as having each condition in both data sources
Impact of data source choice on multimorbidity measurement: a comparison study of 2.3 million individuals in the Welsh National Health Service

August 2023

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37 Reads

Background: Measurement of multimorbidity in research is variable, including the choice of the data source used to ascertain conditions. We compared the estimated prevalence of multimorbidity and associations with mortality using different data sources. Methods: A cross-sectional study of SAIL Databank data including 2,340,027 individuals of all ages living in Wales on 01 January 2019. Comparison of prevalence of multimorbidity and constituent 47 conditions using data from primary care (PC), hospital inpatient (HI), and linked PC-HI data sources and examination of associations between condition count and 12-month mortality. Results: Using linked PC-HI compared with only HI data, multimorbidity was more prevalent (32.2% versus 16.5%), and the population of people identified as having multimorbidity was younger (mean age 62.5 versus 66.8 years) and included more women (54.2% versus 52.6%). Individuals with multimorbidity in both PC and HI data had stronger associations with mortality than those with multimorbidity only in HI data (adjusted odds ratio 8.34 [95% CI 8.02-8.68] versus 6.95 (95%CI 6.79-7.12] in people with ≥ 4 conditions). The prevalence of conditions identified using only PC versus only HI data was significantly higher for 37/47 and significantly lower for 10/47: the highest PC/HI ratio was for depression (14.2 [95% CI 14.1-14.4]) and the lowest for aneurysm (0.51 [95% CI 0.5-0.5]). Agreement in ascertainment of conditions between the two data sources varied considerably, being slight for five (kappa < 0.20), fair for 12 (kappa 0.21-0.40), moderate for 16 (kappa 0.41-0.60), and substantial for 12 (kappa 0.61-0.80) conditions, and by body system was lowest for mental and behavioural disorders. The percentage agreement, individuals with a condition identified in both PC and HI data, was lowest in anxiety (4.6%) and highest in coronary artery disease (62.9%). Conclusions: The use of single data sources may underestimate prevalence when measuring multimorbidity and many important conditions (especially mental and behavioural disorders). Caution should be used when interpreting findings of research examining individual and multiple long-term conditions using single data sources. Where available, researchers using electronic health data should link primary care and hospital inpatient data to generate more robust evidence to support evidence-based healthcare planning decisions for people with multimorbidity.


Mean of care fragmentation measures by number of conditions. UPC, Usual Provider of Care Index; SECON, Sequential Continuity Index; COCI, Continuity of Care Index; GP, general practitioner
Potentially inappropriate medication and all-cause mortality by clinical indicators of fragmentation. Adjusted for age, sex, civil status, origin, educational attainment, income level, population density, and the 39 individual physical and mental conditions in the Danish Multimorbidity Index. Reference for clinical indicators = 0. IRR, incidence rate ratio; HR, hazard ratio
Potentially inappropriate medication and all-cause mortality by formal care fragmentation indices. Restricted cubic splines adjusted for age, sex, civil status, origin, educational attainment, income level, population density, and the 39 individual physical and mental conditions in the Danish Multimorbidity Index. Reference for formal fragmentation indices = 1. UPC, Usual Provider of Care Index; COCI, Continuity of Care Index; SECON, Sequential Continuity Index; GP, general practitioner; IRR, incidence rate ratio; HR, hazard ratio
Healthcare fragmentation, multimorbidity, potentially inappropriate medication, and mortality: a Danish nationwide cohort study

August 2023

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35 Reads

Background Patients with multimorbidity are frequent users of healthcare, but fragmented care may lead to suboptimal treatment. Yet, this has never been examined across healthcare sectors on a national scale. We aimed to quantify care fragmentation using various measures and to analyze the associations with patient outcomes. Methods We conducted a register-based nationwide cohort study with 4.7 million Danish adult citizens. All healthcare contacts to primary care and hospitals during 2018 were recorded. Clinical fragmentation indicators included number of healthcare contacts, involved providers, provider transitions, and hospital trajectories. Formal fragmentation indices assessed care concentration, dispersion, and contact sequence. The patient outcomes were potentially inappropriate medication and all-cause mortality adjusted for demographics, socioeconomic factors, and morbidity level. Results The number of involved healthcare providers, provider transitions, and hospital trajectories rose with increasing morbidity levels. Patients with 3 versus 6 conditions had a mean of 4.0 versus 6.9 involved providers and 6.6 versus 13.7 provider transitions. The proportion of contacts to the patient’s own general practice remained stable across morbidity levels. High levels of care fragmentation were associated with higher rates of potentially inappropriate medication and increased mortality on all fragmentation measures after adjusting for demographic characteristics, socioeconomic factors, and morbidity. The strongest associations with potentially inappropriate medication and mortality were found for ≥ 20 contacts versus none (incidence rate ratio 2.83, 95% CI 2.77–2.90) and ≥ 20 hospital trajectories versus none (hazard ratio 10.8, 95% CI 9.48–12.4), respectively. Having less than 25% of contacts with your usual provider was associated with an incidence rate ratio of potentially inappropriate medication of 1.49 (95% CI 1.40–1.58) and a mortality hazard ratio of 2.59 (95% CI 2.36–2.84) compared with full continuity. For the associations between fragmentation measures and patient outcomes, there were no clear interactions with number of conditions. Conclusions Several clinical indicators of care fragmentation were associated with morbidity level. Care fragmentation was associated with higher rates of potentially inappropriate medication and increased mortality even when adjusting for the most important confounders. Frequent contact to the usual provider, fewer transitions, and better coordination were associated with better patient outcomes regardless of morbidity level.

Flow chart of the study
Factor loadings for food groups in dietary patterns
ORs (95% CIs) for depressive and anxiety symptoms by dietary patterns. All models were adjusted for age, sex, ethnicity, Townsend deprivation index, education level, smoking status, physical activity, history of hypertension, history of diabetes, and history of cardiovascular disease
ORs (95% CIs) of continuous dietary pattern z-scores for the risk of depressive and anxiety symptoms. a–c Depressive symptoms. d–f Anxiety symptoms. Bold lines represent ORs, while shaded areas indicate 95% CIs. All models were adjusted for age, sex, ethnicity, Townsend deprivation index, education level, smoking status, physical activity, history of hypertension, history of diabetes, and history of cardiovascular disease
The associations of dietary patterns with depressive and anxiety symptoms: a prospective study

August 2023

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17 Reads

Background Diet is increasingly recognized as an important risk factor for mental health. However, evidence regarding the association between diet pattern and depressive and anxiety symptoms is limited. We aimed to investigate the associations of dietary patterns characterized by a set of nutrients of interest with depressive and anxiety symptoms. Methods The analyses included a total of 126,819 participants in the UK Biobank who had completed at least two dietary questionnaires. Dietary data were obtained through 24-h dietary assessment at baseline between 2006 and 2010 and four rounds of online follow-ups between 2011 and 2012. Reduced rank regression was applied to derive dietary patterns (DPs) explaining variability in energy density, free sugars, saturated fat, and fiber intakes. Depressive and anxiety symptoms were measured by the Patient Health Questionnaire-9 and General Anxiety Disorder-7 between 2016 and 2017, respectively. Logistic regression models were performed to investigate the associations between dietary patterns and depressive and anxiety symptoms. Results During a mean follow-up of 7.6 years, 2746 cases of depressive symptoms and 2202 cases of anxiety symptoms were recorded. Three major DPs were derived, explaining 74% of the variation in nutrients hypothesized to be related to depressive and anxiety symptoms. DP1 was characterized by high intakes of chocolate, confectionery, butter, and low vegetable/fruit intakes. Compared to the lowest quintile of DP1, the odds ratio (95% confidence interval) of depressive symptoms for Q2–Q5 was 0.82 (0.72–0.93), 0.86 (0.76–0.98), 1.02 (0.90–1.15), and 1.17 (1.03–1.32), respectively. Compared to the lowest quintile of DP1, the odds ratio (95% CI) of anxiety symptoms for Q2–Q5 was 0.84 (0.73–0.97), 0.91 (0.79–1.05), 1.01 (0.88–1.15), and 1.18 (1.03–1.35), respectively. DP2 featured high intakes of sugar-sweetened beverages, added sugars, and low intakes of butter/cheese but showed no significant links to depressive or anxiety symptoms. DP3 was characterized by high butter and milk desserts and low alcohol/bread intakes. Compared to the lowest quintile of DP3, the odds ratio (95% CI) of depressive symptoms for Q2–Q5 was 0.90 (0.79–1.01), 1.00 (0.88–1.13), 1.06 (0.94–1.20), and 1.17 (1.03–1.32), respectively. Compared to the lowest quintile of DP3, the odds ratio (95% CI) of anxiety symptoms for Q2–Q5 was 0.90 (0.78–1.04), 1.05 (0.91–1.20), 1.02 (0.89–1.17), and 1.21 (1.05–1.38), respectively. Conclusions A DP characterized by high intakes of chocolate and confectionery, butter, high-fat cheese, added sugars, along with low intakes of fresh fruit and vegetables, is associated with a higher risk of depressive and anxiety symptoms.

Heat map of Pearson correlation of NLR with demographic and clinical covariates at baseline
Cumulative incidence plot showing 10-year DR incidence risk for NLR quartiles in Tayside
Adjusted Hazards for incidence of DR for different quartiles of NLR from the CSH Model. The model was adjusted for age, sex, HbA1c, eGFR, BMI, HDL, non-HDL-c, SBP, DBP, diabetes drug use at baseline, interaction terms for NLR quartiles with age, eGFR and HbA1c. Q1 denotes the first quartile and Q4 denotes the uppermost quartile. Quartile means for Q1–Q4 were 1.23, 1.79, 2.34 and 4.18, respectively. The Q1 is the reference category
Risk for DR predicted by NLR stratified by quartiles of HbA1c estimated from covariate-adjusted FGR model (Hba1c quartile 4 had the highest HbA1c). The predicted risk was computed for each individual using the adjusted FGR model and the estimates were plotted for corresponding HbA1c quartile and NLR values. Note. The red line represents the model predicted risk for diabetic retinopathy for each unit increase in NLR stratified by quartiles of HbA1c. The slope of the red line shows the predicted risk. The width of the grey line represents the 95% confidence interval limits
Competing risks analysis for neutrophil to lymphocyte ratio as a predictor of diabetic retinopathy incidence in the Scottish population

August 2023

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41 Reads

Background Diabetic retinopathy (DR) is a major sight-threatening microvascular complication in individuals with diabetes. Systemic inflammation combined with oxidative stress is thought to capture most of the complexities involved in the pathology of diabetic retinopathy. A high level of neutrophil–lymphocyte ratio (NLR) is an indicator of abnormal immune system activity. Current estimates of the association of NLR with diabetes and its complications are almost entirely derived from cross-sectional studies, suggesting that the nature of the reported association may be more diagnostic than prognostic. Therefore, in the present study, we examined the utility of NLR as a biomarker to predict the incidence of DR in the Scottish population. Methods The incidence of DR was defined as the time to the first diagnosis of R1 or above grade in the Scottish retinopathy grading scheme from type 2 diabetes diagnosis. The effect of NLR and its interactions were explored using a competing risks survival model adjusting for other risk factors and accounting for deaths. The Fine and Gray subdistribution hazard model (FGR) was used to predict the effect of NLR on the incidence of DR. Results We analysed data from 23,531 individuals with complete covariate information. At 10 years, 8416 (35.8%) had developed DR and 2989 (12.7%) were lost to competing events (death) without developing DR and 12,126 individuals did not have DR. The median (interquartile range) level of NLR was 2.04 (1.5 to 2.7). The optimal NLR cut-off value to predict retinopathy incidence was 3.04. After accounting for competing risks at 10 years, the cumulative incidence of DR and deaths without DR were 50.7% and 21.9%, respectively. NLR was associated with incident DR in both Cause-specific hazard (CSH = 1.63; 95% CI: 1.28–2.07) and FGR models the subdistribution hazard (sHR = 2.24; 95% CI: 1.70–2.94). Both age and HbA1c were found to modulate the association between NLR and the risk of DR. Conclusions The current study suggests that NLR has a promising potential to predict DR incidence in the Scottish population, especially in individuals less than 65 years and in those with well-controlled glycaemic status.

Intensive community care services for children and young people in psychiatric crisis: an expert opinion

August 2023

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91 Reads

Children and young people’s (CYP) mental health is worsening, and an increasing number are seeking psychiatric and mental health care. Whilst many CYPs with low-to-medium levels of psychiatric distress can be treated in outpatient services, CYPs in crisis often require inpatient hospital treatment. Although necessary in many cases, inpatient care can be distressing for CYPs and their families. Amongst other things, inpatient stays often isolate CYPs from their support networks and disrupt their education. In response to such limitations, and in order to effectively support CYPs with complex mental health needs, intensive community-based treatment models, which are known in this paper as intensive community care services (ICCS), have been developed. Although ICCS have been developed in a number of settings, there is, at present, little to no consensus of what ICCS entails. Methods A group of child and adolescent mental health clinicians, researchers and academics convened in London in January 2023. They met to discuss and agree upon the minimum requirements of ICCS. The discussion was semi-structured and used the Dartmouth Assertive Community Treatment Fidelity Scale as a framework. Following the meeting, the agreed features of ICCS, as described in this paper, were written up. Results ICCS was defined as a service which provides treatment primarily outside of hospital in community settings such as the school or home. Alongside this, ICCS should provide at least some out-of-hours support, and a minimum of 90% of CYPs should be supported at least twice per week. The maximum caseload should be approximately 5 clients per full time equivalent (FTE), and the minimum number of staff for an ICCS team should be 4 FTE. The group also confirmed the importance of supporting CYPs engagement with their communities and the need to remain flexible in treatment provision. Finally, the importance of robust evaluation utilising tools including the Children’s Global Assessment Scale were agreed. Conclusions This paper presents the agreed minimum requirements of intensive community-based psychiatric care. Using the parameters laid out herein, clinicians, academics, and related colleagues working in ICCS should seek to further develop the evidence base for this treatment model.

Correspondence to: Estimating the full health and economic benefits of current and future influenza vaccines

August 2023

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32 Reads

We recently published an article in BMC Medicine looking at the potential health and economic impact of paediatric vaccination using next-generation influenza vaccines in Kenya: a modelling study. In their commentary on our article, Lafond et al. highlight the potential importance of the wider benefits of vaccination on cost-effectiveness. Whilst we agree with many points raised in the commentary, we think it raises further interesting discussion points, specifically around model complexity, model assumptions and data availability. These points are both relevant to this manuscript but have wider implications for vaccine cost-effectiveness studies.


Flowchart depicting the study design and derivation of the study population
Interaction and joint analysis of adverse childhood experiences and adverse adulthood experiences with incident cardiovascular disease
Adverse childhood and adulthood experiences and risk of new-onset cardiovascular disease with consideration of social support: a prospective cohort study

August 2023

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82 Reads

Background The relationship between adverse childhood experiences (ACEs) and adverse adulthood experiences (AAEs) and their association with incident cardiovascular disease (CVD) have not been extensively studied. Considering social support, we evaluated the complex relations of ACEs and AAEs with incident CVD. Methods This prospective cohort study used data from the 2014 life course survey and the 2015 and 2018 surveys of the China Health and Retirement Longitudinal Study, a national survey of Chinese adults aged ≥ 45 years from 28 provinces across China. The study population included 5836 individuals (mean [SD] age, 59.59 [8.22] years, 49.7% were males). Information on ACEs, AAEs, young adulthood social support, health behavior factors, health status factors, and demographics was measured. Cox regression models, the difference method to estimate the mediation proportion, and the additive and multiplicative interactions were performed. Subgroup and sensitivity analyses were also conducted. Results During follow-up, 789 incident cases of CVD occurred. The fully adjusted model, including demographics, health behaviors, health status factors (e.g., depressive symptoms), and social support as control variables, demonstrated that the overall number of ACEs (Hazard ratio [HR]: 1.11, 95% CI: 1.08 to 1.14) and AAEs (HR: 1.19, 95% CI: 1.16 to 1.22) were associated with an increased risk of incident CVD. A dose–response relationship existed between the number of ACEs or AAEs and incident CVD risk. The overall AAEs were found to mediate 17.7% (95% CI: 8.2 to 34.2%) of the association between ACEs and incident CVD. Moreover, a significant additive interaction between ACEs and AAEs was detected (RERI [95% CI]: 0.32 [0.09 to 0.56]). Compared with adults without exposure to both ACE and AAE, those with exposure to both at least one ACE and one AAE indicator had the highest risk of incident CVD (HR: 1.96, 95% CI: 1.72 to 2.23). Conclusions Exposure to ACEs or AAEs was independently associated with an increased risk of incident CVD among Chinese middle-aged and older adults in a dose–response manner, and the overall AAEs partially mediated the association between ACEs and incident CVD. Preventive measures aimed at addressing either ACEs or AAEs alone may not significantly reduce the risk of CVD later in life. The necessity of a comprehensive life-course health strategy targeting the prevention of adversity merits increased attention.

Flowchart of development and validation of the TSC-PROM, according to the standards from the COSMIN. ASEBA, Achenbach System of Empirically Based Assessment; ASR, Adult Self Report; CBCL, Child Behavior Checklist; ICF, International Classification of Functioning and Disability; PROM, patient-reported outcome measure; SF-36, Short-Form 36; TAND, TSC-associated neuropsychiatric disorders
Understanding the impact of tuberous sclerosis complex: development and validation of the TSC-PROM

August 2023

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53 Reads

Background Tuberous sclerosis complex (TSC) is a rare and complex genetic disorder, associated with tumor growth in various organ systems, epilepsy, and a range of neuropsychiatric manifestations including intellectual disability. With improving patient-centered care and targeted therapies, patient-reported outcome measures (PROMs) are needed to measure the impact of TSC manifestations on daily functioning. The aim of this study was to develop a TSC-specific PROM for adults that captures the impact of TSC on physical functions, mental functions, activity and participation, and the social support individuals with TSC receive, called the TSC-PROM. Methods COSMIN methodology was used to develop a self-reported and proxy-reported version. Development and validation consisted of the following studies: PROM development, content validity, structural validity, internal consistency, and construct validity. The International Classification of Functioning and Disability was used as a framework. Content validity was examined by a multidisciplinary expert group and cognitive interview study. Structural and construct validity, and internal consistency were examined in a large cohort, using confirmatory factor analysis, hypotheses testing, and Cronbach’s alpha. Results The study resulted in an 82-item self version and 75-item proxy version of the TSC-PROM with four subscales (physical functions 18 and 19 items, mental functions 37 and 28 items, activities and participation 13 and 14 items, social support 13 items, for self version and proxy version respectively). Sufficient results were found for structural validity with sufficient unidimensionality for each subscale. With regard to construct validity, 82% of the hypotheses were met for the self version and 59% for the proxy version. The PROM showed good internal consistency (Cronbach’s alpha 0.78–0.97). Conclusions We developed a PROM for adults with TSC, named TSC-PROM, showing sufficient evidence for reliability and validity that can be used in clinical and research settings to systematically gain insight into their experiences. It is the first PROM in TSC that addresses the impact of specific TSC manifestations on functioning, providing a valuable, patient-centered addition to the current clinical outcomes.

Identification of a novel bile marker clusterin and a public online prediction platform based on deep learning for cholangiocarcinoma

August 2023

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24 Reads

Background Cholangiocarcinoma (CCA) is a highly aggressive malignant tumor, and its diagnosis is still a challenge. This study aimed to identify a novel bile marker for CCA diagnosis based on proteomics and establish a diagnostic model with deep learning. Methods A total of 644 subjects (236 CCA and 408 non-CCA) from two independent centers were divided into discovery, cross-validation, and external validation sets for the study. Candidate bile markers were identified by three proteomics data and validated on 635 clinical humoral specimens and 121 tissue specimens. A diagnostic multi-analyte model containing bile and serum biomarkers was established in cross-validation set by deep learning and validated in an independent external cohort. Results The results of proteomics analysis and clinical specimen verification showed that bile clusterin (CLU) was significantly higher in CCA body fluids. Based on 376 subjects in the cross-validation set, ROC analysis indicated that bile CLU had a satisfactory diagnostic power (AUC: 0.852, sensitivity: 73.6%, specificity: 90.1%). Building on bile CLU and 63 serum markers, deep learning established a diagnostic model incorporating seven factors (CLU, CA19-9, IBIL, GGT, LDL-C, TG, and TBA), which showed a high diagnostic utility (AUC: 0.947, sensitivity: 90.3%, specificity: 84.9%). External validation in an independent cohort (n = 259) resulted in a similar accuracy for the detection of CCA. Finally, for the convenience of operation, a user-friendly prediction platform was built online for CCA. Conclusions This is the largest and most comprehensive study combining bile and serum biomarkers to differentiate CCA. This diagnostic model may potentially be used to detect CCA.

Decreased TMIGD1 aggravates colitis and intestinal barrier dysfunction via the BANF1-NF-κB pathway in Crohn’s disease

August 2023

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43 Reads

Background Disrupted intestinal epithelial barrier is one of the major causes of Crohn’s disease (CD). Novel molecular targets for intestinal epithelial barrier are essential to treatment of CD. Transmembrane and immunoglobulin domain-containing protein 1 (TMIGD1) is an adhesion molecule that regulates cell adhesion, migration, and enterocyte differentiation. However, the function and mechanism of TMIGD1 in CD and intestinal epithelial barrier has rarely been studied. Furthermore, the association between TMIGD1 and the clinical features of CD remains unclear. Methods Transcriptome analysis on colonic mucosa from CD patients and healthy individuals were performed to identify dysregulated genes. Multi-omics integration of the 1000IBD cohort including genomics, transcriptomics of intestinal biopsies, and serum proteomics identified the association between genes and characteristics of CD. Inflammation was assessed by cytokine production in cell lines, organoids and intestinal-specific Tmigd1 knockout (Tmigd1INT-KO) mice. Epithelial barrier integrity was evaluated by trans-epithelium electrical resistance (TEER), paracellular permeability, and apical junction complex (AJC) expression. Co-immunoprecipitation, GST pull-down assays, mass spectrometry, proteomics, and transcriptome analysis were used to explore downstream mechanisms. Results Multi-omics integration suggested that TMIGD1 was negatively associated with inflammatory characteristics of CD. TMIGD1 was downregulated in inflamed intestinal mucosa of patients with CD and mice colitis models. Tmigd1INT-KO mice were more susceptible to chemically induced colitis. In epithelial cell lines and colonic organoids, TMIGD1 knockdown caused impaired intestinal barrier integrity evidenced by increased paracellular permeability and reduced TEER and AJC expression. TMIGD1 knockdown in intestinal epithelial cells also induced pro-inflammatory cytokine production. Mechanistically, TMIGD1 directly interacted with cytoplasmic BAF nuclear assembly factor 1 (BANF1) to inhibit NF-κB activation. Exogenous expression of TMIGD1 and BANF1 restored intestinal barrier function and inhibited inflammation in vitro and in vivo. TMIGD1 expression predicted response to anti-TNF treatment in patients with CD. Conclusions Our study demonstrated that TMIGD1 maintained intestinal barrier integrity and inactivated inflammation, and was therefore a potential therapeutic target for CD.

Schematic of the matched cohort study design. This schematic shows the study period and gives example of hypothetical study participants demonstrating their eligibility and study follow-up period
Hazard ratios for the association between eczema/psoriasis and anxiety or depression from stratified Cox models. Three models were developed for each exposure-outcome association with varying levels of adjustment. The crude model adjusted for matched set only (age, sex, practice). The confounder-adjusted model additionally adjusted for deprivation, calendar period, asthma (in eczema) or psoriatic arthropathy (in psoriasis), and Charlson comorbidity index. The mediator-adjusted model additionally adjusted for BMI (as evidence of obesity), smoking status, harmful alcohol use. Mediator-adjusted models in the eczema cohort additionally adjusted for sleep problems and immediate risk following a prescription of high-dose oral glucocorticoids. Dots; estimated HR. Lines; 95% CI. Text shows (the number of individuals in the model) HR, [95% CI]
Estimated time-varying hazard ratios (HRs) for the association between inflammatory skin conditions and anxiety or depression. Red/blue dotted line and region, fully parametric penalised spline; black dotted line and region, the proportional hazards estimate and 95% CI from the relevant Cox model. Confidence intervals for the spline models show the 2.5 and 97.5 percentiles from 200 bootstrap iterations of the model. All models adjusted for age, sex, practice, deprivation, calendar period, asthma (in eczema) or psoriatic arthropathy (in psoriasis), and Charlson comorbidity index, BMI (as evidence of obesity), smoking status, harmful alcohol use (plus sleep problems and high dose oral glucocorticoid use in the eczema models)
Hazard ratios for the association between eczema/psoriasis severity and anxiety or depression from stratified Cox models. Models were adjusted for confounders (age, sex, practice, deprivation, calendar period, asthma (in eczema) or psoriatic arthropathy (in psoriasis), and Charlson comorbidity index). Dots; estimated HR. Lines; 95% CI. Text shows (the number of individuals in the model) HR, [95% CI]
Common mental health disorders in adults with inflammatory skin conditions: nationwide population-based matched cohort studies in the UK

August 2023

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27 Reads

Background Psoriasis and atopic eczema are common inflammatory skin diseases. Existing research has identified increased risks of common mental disorders (anxiety, depression) in people with eczema and psoriasis; however, explanations for the associations remain unclear. We aimed to establish the risk factors for mental illness in those with eczema or psoriasis and identify the population groups most at risk. Methods We used routinely collected data from the UK Clinical Practice Research Datalink (CPRD) GOLD. Adults registered with a general practice in CPRD (1997–2019) were eligible for inclusion. Individuals with eczema/psoriasis were matched (age, sex, practice) to up to five adults without eczema/psoriasis. We used Cox regression to estimate hazard ratios (HRs) and 95% confidence intervals (CIs) for hazards of anxiety or depression in people with eczema/psoriasis compared to people without. We adjusted for known confounders (deprivation, asthma [eczema], psoriatic arthritis [psoriasis], Charlson comorbidity index, calendar period) and potential mediators (harmful alcohol use, body mass index [BMI], smoking status, and, in eczema only, sleep quality [insomnia diagnoses, specific sleep problem medications] and high-dose oral glucocorticoids). Results We identified two cohorts with and without eczema (1,032,782, matched to 4,990,125 without), and with and without psoriasis (366,884, matched to 1,834,330 without). Sleep quality was imbalanced in the eczema cohorts, twice as many people with eczema had evidence of poor sleep at baseline than those without eczema, including over 20% of those with severe eczema. After adjusting for potential confounders and mediators, eczema and psoriasis were associated with anxiety (adjusted HR [95% CI]: eczema 1.14 [1.13–1.16], psoriasis 1.17 [1.15–1.19]) and depression (adjusted HR [95% CI]: eczema 1.11 [1.1–1.12], psoriasis 1.21 [1.19–1.22]). However, we found evidence that these increased hazards are unlikely to be constant over time and were especially high 1-year after study entry. Conclusions Atopic eczema and psoriasis are associated with increased incidence of anxiety and depression in adults. These associations may be mediated through known modifiable risk factors, especially sleep quality in people with eczema. Our findings highlight potential opportunities for the prevention of anxiety and depression in people with eczema/psoriasis through treatment of modifiable risk factors and enhanced eczema/psoriasis management.

Flow chart of study population. AA, African American; AYA, adolescent and young adult; NHANES, National Health and Nutrition Examination Survey; NHW, non-Hispanic White
Prevalence of social, physical, and psychological health characteristics in AYA survivors and matched general by race/ethnicity. AA, African American; NHW, non-Hispanic White. General: age, sex, and survey year matched general population by race/ethnicity group. *Descriptive analysis with proportion (%) and the greatest value was highlighted with red circle. **Cardiovascular comorbidities: hypertension, stroke, angina/angina pectoris, myocardial infarction, obesity, diabetes mellitus, dyslipidemia; non-cardiovascular comorbidities: arthritis, thyroid disease, asthma; daily limitation: daily activity limitation due to emotional problem
Racial differences in long-term social, physical, and psychological health among adolescent and young adult cancer survivors

August 2023

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19 Reads

Background The current guidelines for survivorship in adolescents and young adults (AYA) cancer are based on studies conducted in the United States and European AYA survivors. However, previous studies have shown that the health-related quality of life in cancer survivors can vary depending on race, yet the long-term health differences among AYA survivors by race/ethnicity have not been fully explored. Therefore, our aim is to compare the psychosocial and physical health of AYA survivors and their matched controls across different racial and ethnic groups. Methods We conducted a cross-sectional study using US National Health and Nutrition Examination Survey (NHANES) and the Korea NHANES from 2007 to 2018. We included AYA cancer survivors who were diagnosed with any type of cancer aged between 15 and 39 years, and who were adult with aged over 18 years old at survey year. We then stratified the study population by race/ethnicity with Non-Hispanic White (NHW, n = 310), African American (AA, n = 42), Hispanic (n = 81) from NHANES, and Asian (n = 389) from the Korea NHANES. We also selected 5 times age-, sex-, race-, and survey year-matched general population among participants who had never been diagnosed with cancer (N = 4110). Variables were defined using questionnaire data, physical exams, and laboratory tests. Results Compared to NHW, Hispanics (aOR 1.15, 95% CI 1.00–1.32) had poor or fair general health, lower education (aOR 1.23, 95% CI 1.07–1.40), and lower household income (aOR 1.16, 95% CI 1.01–1.33). AA survivors were more likely to be non-coupled (aOR 1.35, 95% 1.15–1.60) and have hypertension (aOR 1.18, 95% CI 1.03–1.36). Asians were more former/current drinkers (aOR 1.21, 95% CI 1.05–1.40). NHW are more likely to experience psychological limitation. Compared to matched general, NHW and Asian survivors had poor general health and psychological health. Conclusions This study provides evidence for future studies concerning long-term health after AYA cancer survivorship that may vary according to race.

Descriptives and logistic regression model of the Salzburg dataset. A Distribution of tinnitus over age and mean hearing loss. B Age characterisation was based on the median age of 55 years. The results showed enhanced tinnitus probability in older individuals compared to younger people over mean hearing loss scores
Descriptives of the NHANES dataset. A Distribution of tinnitus over age and mean hearing threshold. B Proportion of tinnitus and hearing loss in different age groups
Logistic regression model of the NHANES dataset. Age characterisation was based on the median age of 34 years. The results showed enhanced tinnitus probability in older individuals compared to younger people over mean hearing loss scores
Ageing as risk factor for tinnitus and its complex interplay with hearing loss—evidence from online and NHANES data

August 2023

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40 Reads

Background Tinnitus affects 10 to 15% of the population, but its underlying causes are not yet fully understood. Hearing loss has been established as the most important risk factor. Ageing is also known to accompany increased prevalence; however, the risk is normally seen in context with (age-related) hearing loss. Whether ageing per se is a risk factor has not yet been established. We specifically focused on the effect of ageing and the relationship between age, hearing loss, and tinnitus. Methods We used two samples for our analyses. The first, exploratory analyses comprised 2249 Austrian individuals. The second included data from 16,008 people, drawn from a publicly available dataset (NHANES). We used logistic regressions to investigate the effect of age on tinnitus. Results In both samples, ageing per se was found to be a significant predictor of tinnitus. In the more decisive NHANES sample, there was an additional interaction effect between age and hearing loss. Odds ratio analyses show that per unit increase of hearing loss, the odds of reporting tinnitus is higher in older people (1.06 vs 1.03). Conclusions Expanding previous findings of hearing loss as the main risk factor for tinnitus, we established ageing as a risk factor in its own right. Underlying mechanisms remain unclear, and this work calls for urgent research efforts to link biological ageing processes, hearing loss, and tinnitus. We therefore suggest a novel working hypothesis that integrates these aspects from an ageing brain viewpoint.

Potential strategies for intercurrent events
Why estimands are needed to define treatment effects in clinical trials

July 2023

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9 Reads

Background The estimand for a clinical trial is a precise definition of the treatment effect to be estimated. Traditionally, estimates of treatment effects are based on either an ITT analysis or a per-protocol analysis. However, there are important clinical questions which are not addressed by either of these analyses. For example, consider a trial where patients take a rescue medication. The ITT analysis includes data after use of rescue, while the per-protocol analysis excludes these patients altogether. Neither of these analyses addresses the important question of what the treatment effect would have been if patients did not take rescue medication. Main text Trial estimands provide a broader perspective compared to the limitations of ITT and per-protocol analysis. Trial treatment effects depend on how events occurring after treatment initiation such as use of alternative medication or discontinuation of the intervention are included in the definition. These events can be accounted for in different ways, depending on the clinical question of interest. Conclusion The estimand framework is an important step forward in improving the clarity and transparency of clinical trials. The centrality of estimands to clinical trials is currently not reflected in methods recommended by the Cochrane group or the CONSORT statement, the current standard for reporting clinical trials in medical journals. We encourage revisions to these guidelines.

Estimated projection of incidence and mortality of alcohol-related liver disease in China from 2022 to 2040: a modeling study

July 2023

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29 Reads

Background China has one of the highest numbers of liver disease cases in the world, including 6.4 million cirrhosis associated with alcohol-related liver disease (ALD) cases. However, there is still a lack of urgent awareness about the growth of alcohol consumption and the increased burden of ALD in China. Therefore, we aimed to project the potential impact of changes in alcohol consumption on the burden of ALD in China up to 2040 under different scenarios. Methods We developed a Markov model to simulate the natural history of ALD until 2040 in China. We estimated the incidence and mortality of alcohol-related cirrhosis and hepatocellular carcinoma between 2022 and 2040 under four projected scenarios: status quo scenario and scenarios with a 2%, 4%, and 8% annual decrease in excessive alcohol consumption, respectively. Results Under the status quo scenario, the cumulative new cases of cirrhosis from 2022 to 2040 was projected to be 3.61 million (95% UI 3.03–4.44 million), resulting in a cumulative 1.96 million (1.66–2.32 million) deaths from alcohol-related cirrhosis and hepatocellular carcinoma. However, a 2% annual reduction in excessive alcohol consumption was expected to avert 0.3 million deaths associated with ALD, and a 4% annual reduction was projected to prevent about 1.36 million new cases of cirrhosis and prevent 0.5 million ALD-related deaths. Moreover, an 8% annual reduction would prevent about 2 million new cases of cirrhosis and 0.82 million deaths. Conclusions Without any substantial change in alcohol attitudes and policies to regulate excessive drinking, the disease burden of ALD in China will increase enormously. Strengthening the implementation of alcohol restriction interventions is critical and urgent to reduce the impact of ALD on the Chinese population.

Workflow of the causal inference between IDPs and stroke. AS, any stroke; AIS, any ischemic stroke; CES, cardioembolic stroke; LAS, large artery stroke; MAF, minor allele frequency; LD, linkage disequilibrium; SVS, small vessel stroke
Causal associations between IDPs and stroke in the forward MR and reverse MR. The heatmap plot shows the causal associations between IDPs with at least one significant MR signals in forward and reverse MR and stroke. The pattern diagram in the bottom shows the brain anatomical region of corresponding IDPs. AS, any stroke; AIS, any ischemic stroke; CES, cardioembolic stroke; FA, fractional anisotropy; ISOVF, isotropic volume fraction; MD, mean diffusivity; SVS, small vessel stroke
Causal associations in the forward and reverse MR using the MR-IVW method. The forest plot shows the significant causal associations with P value < 5.91 × 10⁻⁵ and the estimated OR (or beta) with 95% confidence intervals (CI). AS, any stroke; AIS, any ischemic stroke; CES, cardioembolic stroke; FA, fractional anisotropy; ISOVF, isotropic volume fraction; MD, mean diffusivity; SVS, small vessel stroke
Assessment of bidirectional relationships between brain imaging-derived phenotypes and stroke: a Mendelian randomization study

July 2023

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23 Reads

Background Stroke is a major cause of mortality and long-term disability worldwide. Whether the associations between brain imaging-derived phenotypes (IDPs) and stroke are causal is uncertain. Methods We performed two-sample bidirectional Mendelian randomization (MR) analyses to explore the causal associations between IDPs and stroke. Summary data of 587 brain IDPs (up to 33,224 individuals) from the UK Biobank and five stroke types (sample size range from 301,663 to 446,696, case number range from 5,386 to 40,585) from the MEGASTROKE consortium were used. Results Forward MR indicated 14 IDPs belong to projection fibers or association fibers were associated with stroke. For example, higher genetically determined mean diffusivity (MD) in the right external capsule was causally associated with an increased risk of small vessel stroke (IVW OR = 2.76, 95% CI 2.07 to 3.68, P = 5.87 × 10⁻¹²). Reverse MR indicated that genetically determined higher risk of any ischemic stroke was associated with increased isotropic or free water volume fraction (ISOVF) in body of corpus callosum (IVW β = 0.23, 95% CI 0.14 to 0.33, P = 3.22 × 10⁻⁷). This IDP is a commissural fiber and it is not included in the IDPs identified by forward MR. Conclusions We identified 14 IDPs with statistically significant evidence of causal effects on stroke or stroke subtypes. We also identified potential causal effects of stroke on one IDP of commissural fiber. These findings might guide further work toward identifying preventative strategies at the brain imaging levels.

Flowchart shows participants’ enrollment
PD patients showed lower DAT availability in the caudate (p < 0.001) and putamen (p < 0.001) compared to HC. Current coffee consumers showed a tendency of lower DAT availability in the caudate than former/never coffee consumers in both PD patients and HC. In PD patients, there were significant differences in DAT availability in the caudate (p = 0.008) across three PD subgroups. Specifically, post hoc tests showed that current coffee consumers had significantly lower DAT availability in the caudate than former coffee consumers (p = 0.01) and never (p = 0.022) coffee consumers. In HC, there were significant differences in DAT availability in the caudate (p = 0.031) across three HC subgroups. Specifically, post hoc tests showed that current coffee consumers had significantly lower DAT availability in the caudate than former coffee consumers (p = 0.022) coffee consumers. PD-CC, current consumers of PD patients; PD-FC, former consumers of PD patients; PD-NC, never consumers of PD patients; HC-CC, current consumers of healthy controls; HC-FC, former consumers of healthy controls; HC-NC, never consumers of healthy controls; SBR, striatal binding ratios. **Bonferroni corrected; *Bonferroni uncorrected
Correlation analysis showed that cups per day were negatively correlated with the caudate DAT availability in current consumers of PD patients. SBR, striatal binding ratios
A proposed possible mechanism underlying the favorable implication of caffeine to PD pathologies. Caffeine enhances dopamine levels with a secondary reduced DAT availability in current coffee consumers compared to former/never coffee consumers in HC (a) and PD patients (b). The degeneration of dopaminergic neurons results in reduced DAT density and dopamine levels in PD patients (b) compared to HC (a). The inverse alteration of dopamine levels caused by PD pathologies and caffeine may be the reason for the favorable implication of caffeine to PD pathologies
Current coffee consumption is associated with decreased striatal dopamine transporter availability in Parkinson’s disease patients and healthy controls

July 2023

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81 Reads

Abstract Background Coffee is the most widely consumed psychostimulant worldwide. Emerging evidence indicates that coffee consumption habit significantly reduces the risk of developing Parkinson’s disease (PD). However, the effect of coffee consumption on nigrostriatal dopaminergic neurodegeneration is still largely unknown. We therefore aim to investigate the role of coffee consumption in nigrostriatal dopaminergic neurodegeneration using dopamine transporter (DAT) imaging in PD and healthy controls (HC). Methods A total of 138 PD patients and 75 HC with questionnaires about coffee consumption, and DAT scans were recruited from the Parkinson’s Progression Markers Initiative cohort. Demographic, clinical, and striatal DAT characteristics were compared across subgroups of current, former, and never coffee consumers in PD and HC, respectively. Furthermore, partial correlation analyses were performed to determine whether there was a relationship between coffee cups consumed per day and striatal DAT characteristics in each striatal region. In addition, the factors that may have influenced the loss of nigrostriatal dopaminergic neurons were included in multiple linear regression analyses to identify significant contributing factors to DAT availability in each striatal region. Results PD patients had lower DAT availability in each striatal region than HC (p

Patient cohort description. Phenotyping algorithm to define HF cohorts. HF patients were selected with hospital visits over a time span of 13 years at the University Hospital Heidelberg. We defined a general HF cohort by selecting patients with either two or more HF relevant ICD-10 codes or one HF relevant ICD-10 code and one additional HF relevant clinical characteristic, yielding 29,047 HF patients. Based on LvEF, we subclassified HF patients to HFrEF, HFmrEF, or HFpEF. RWH Research Data Warehouse, HF heart failure, LvEF left ventricular ejection fraction; e/e’ is the ratio between early mitral inflow velocity and mitral annular early diastolic velocity on echocardiography
Comparison of comorbidity profiles in heart failure subtypes. A Scheme of analysis. EH essential hypertension, CAD coronary artery disease, DMII diabetes mellitus type II, RA rheumatoid arthritis. B Multiple correspondence analysis of comorbidity profiles of HFpEF and HFrEF cohort. MCA dimensions were tested for association with clinical covariates and summed up to estimate total explained variance. C Proportions of the sum of parameter estimates of top 100 comorbidities of the patient classifier model, colored by disease categories. D Top 50 comorbidities of the patient classifier. The parameters are the absolute fitted values of the coefficients in the elastic net model for each comorbidity of the patient classifier separated by association to HFpEF (top) or HFrEF features (bottom). Colors indicate disease category using the same color legend as in B
The heart failure comorbidity network (HFnet). A Scheme of comorbidity network analysis. EH essential hypertension, CAD coronary artery disease, DMII diabetes mellitus type II, RA rheumatoid arthritis. B Disease category composition of disease clusters (DCs) in the HFnet. Number of nodes per cluster in top barplot and number of diseases per category in side barplot. C Subgraphs of the HFnet visualized (left DC1, right DC3). Node size relates to prevalence, edge width to scaled phi-correlation, node color to disease category. Only edges with highest weights were plotted for visibility. D Comparison of patient cohorts based on DC similarity. Jaccard indices were calculated between each patient and each DC, then unpaired two-sided Wilcoxon rank test was applied to compare different patient cohorts. The log transformed p-value was multiplied by the sign of the test estimate for visualization purposes such that positive values indicate higher cluster similarity with the first cohort of the contrast label. Patient cohorts were selected by age stratification, sex, and HF subtype
HFhetnet characterization. A Schematic overview of HFhetnet and its different layers built by including seven independent data sources. B Characterization of network layers by size (number of nodes and edges), edge density (percentage of possible edges), degree centrality, global transitivity (average probability of the neighbors of a node being connected), degree assortativity (preference of nodes to connect with nodes of similar degree), and literature bias (i.e., gene degree/PubMed score correlation). C Leave one out cross-validation results for all diseases with two or more DisGeNET links. We compared the performance of gene set recovery with different versions of the HFhetnet by modifying only the disease network. We compared HFnet + HPOnet (i.e., the original HFhetnet), only the HFnet (without HPOnet), and a rewired HFnet. Outliers are not plotted for visualization purposes. Paired, two-sided Wilcoxon test, *p < 0.001. AUC-PR area under the precision/recall curve, AUROC area under the receiver operator curve. GO Gene Ontology, HPO human phenotype ontology
HFpEF gene prediction. A AUROC and AUC-PR for different HF-related gene sets in random walk probability vectors based on HFpEF and HFrEF comorbidity profiles. Prior knowledge gene sets are DisGeNET, Kegg pathway for dilated cardiomyopathy (DCM), cardiomyopathy (literature curated). Data-based gene sets are PheWAS, ReHeaT, and GWAS variants. B Prioritizing genes for HFpEF that are close to HFpEF comorbidity profiles in the HFhetnet and also display high ranking differences when compared to gene predictions based on HFrEF comorbidity profiles. C Scheme of experimental design for murine model of HFpEF by HFD/L-NAME diet. Cardiac ventricles were harvested after 9 weeks and bulk transcriptomics were collected. D Volcano plot displaying gene expression regulation in the murine HFpEF model compared to control. Labeled genes display HFpEF predicted genes from human comorbidity profiles. E Predicted HF genes from comorbidity analysis were enriched in gene-level t-statistics of murine differentially expression analysis comparing disease with control. Gene set enrichment p-value. ***p < 0.001. **p < 0.01
A network medicine approach to study comorbidities in heart failure with preserved ejection fraction

July 2023

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74 Reads

Background Comorbidities are expected to impact the pathophysiology of heart failure (HF) with preserved ejection fraction (HFpEF). However, comorbidity profiles are usually reduced to a few comorbid disorders. Systems medicine approaches can model phenome-wide comorbidity profiles to improve our understanding of HFpEF and infer associated genetic profiles. Methods We retrospectively explored 569 comorbidities in 29,047 HF patients, including 8062 HFpEF and 6585 HF with reduced ejection fraction (HFrEF) patients from a German university hospital. We assessed differences in comorbidity profiles between HF subtypes via multiple correspondence analysis. Then, we used machine learning classifiers to identify distinctive comorbidity profiles of HFpEF and HFrEF patients. Moreover, we built a comorbidity network (HFnet) to identify the main disease clusters that summarized the phenome-wide comorbidity. Lastly, we predicted novel gene candidates for HFpEF by linking the HFnet to a multilayer gene network, integrating multiple databases. To corroborate HFpEF candidate genes, we collected transcriptomic data in a murine HFpEF model. We compared predicted genes with the murine disease signature as well as with the literature. Results We found a high degree of variance between the comorbidity profiles of HFpEF and HFrEF, while each was more similar to HFmrEF. The comorbidities present in HFpEF patients were more diverse than those in HFrEF and included neoplastic, osteologic and rheumatoid disorders. Disease communities in the HFnet captured important comorbidity concepts of HF patients which could be assigned to HF subtypes, age groups, and sex. Based on the HFpEF comorbidity profile, we predicted and recovered gene candidates, including genes involved in fibrosis (COL3A1, LOX, SMAD9, PTHL), hypertrophy (GATA5, MYH7), oxidative stress (NOS1, GSST1, XDH), and endoplasmic reticulum stress (ATF6). Finally, predicted genes were significantly overrepresented in the murine transcriptomic disease signature providing additional plausibility for their relevance. Conclusions We applied systems medicine concepts to analyze comorbidity profiles in a HF patient cohort. We were able to identify disease clusters that helped to characterize HF patients. We derived a distinct comorbidity profile for HFpEF, which was leveraged to suggest novel candidate genes via network propagation. The identification of distinctive comorbidity profiles and candidate genes from routine clinical data provides insights that may be leveraged to improve diagnosis and identify treatment targets for HFpEF patients. Graphical Abstract

Selection of study participants in the UK Biobank
Restricted cubic spline for testing the hypothesis of nonlinear correlation between A Alzheimer’s dementia, B vascular dementia, C frontotemporal dementia, and DII. Spline curves represent hazard ratios (HRs) adjusted for age, sex, ethnicity, education, and Townsend deprivation index, diabetes, blood pressure status, drinking status, smoking status, body mass index, physical activity, energy intake, and family history of dementia. The solid lines are fitted based on Cox-proportional hazard models. The shaded areas show 95% confidential intervals (CIs). The red dashed line indicates the position where the curve inflection point occurs
Associations between dietary inflammatory index and dementia across subgroups. Hazard ratio for each 1 increase in dietary inflammatory index. Adjusted for age, sex, ethnicity, education, and Townsend deprivation index, diabetes, blood pressure status, drinking status, smoking status, body mass index, physical activity, energy intake, and family history of dementia
Association of pro-inflammatory diet with increased risk of all-cause dementia and Alzheimer's dementia: a prospective study of 166,377 UK Biobank participants

July 2023

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37 Reads

Background Increasing evidence suggests an association between pro-inflammatory diets and cognitive function. However, only a few studies based on small sample sizes have explored the association between pro-inflammatory diets and dementia using the dietary inflammatory index (DII). Additionally, the relationship between DII and different subtypes of dementia, such as Alzheimer's dementia and vascular dementia, remains largely unexplored. Given the changes in brain structure already observed in patients with dementia, we also investigated the association between DII and magnetic resonance imaging (MRI) measures of brain structure to provide some hints to elucidate the potential mechanisms between pro-inflammatory diet and cognitive decline. Methods A total of 166,377 UK Biobank participants without dementia at baseline were analyzed. DII calculations were based on the information collected by the 24-h recall questionnaire. Brain structural anatomy and tissue-specific volumes were measured using brain MRI. Cox proportional hazards models, competing risk models, and restricted cubic spline were applied to assess the longitudinal associations. The generalized linear model was used to assess the association between DII and MRI measurements. Results During a median follow-up time of 9.46 years, a total of 1372 participants developed dementia. The incidence of all-cause dementia increased by 4.6% for each additional unit of DII [hazard ratio (HR): 1.046]. Besides, DII displayed a “J-shaped” non-linear association with Alzheimer’s dementia (Pnonlinear = 0.003). When DII was above 1.30, an increase in DII was significantly associated with an increased risk of Alzheimer’s dementia (HR: 1.391, 95%CI: 1.085–1.784, P = 0.009). For brain MRI, the total volume of white matter hyperintensities increased with an increase in DII, whereas the volume of gray matter in the hippocampus decreased. Conclusions In this cohort study, higher DII was associated with a higher risk of all-cause dementia and Alzheimer’s dementia. However, our findings suggested that the association with DII and vascular and frontotemporal dementia was not significant.

Flowchart of the study design
Percentage of non-responder to four antipsychotics at endpoint, stratified by baseline illness severity
Early non-response as a predictor of later non-response to antipsychotics in schizophrenia: a randomized trial

July 2023

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40 Reads

Abstract Background It remains a challenge to predict the long-term response to antipsychotics in patients with schizophrenia who do not respond at an early stage. This study aimed to investigate the optimal predictive cut-off value for early non-response that would better predict later non-response to antipsychotics in patients with schizophrenia. Methods This multicenter, 8-week, open-label, randomized trial was conducted at 19 psychiatric centers throughout China. All enrolled participants were assigned to olanzapine, risperidone, amisulpride, or aripiprazole monotherapy for 8 weeks. The positive and negative syndrome scale (PANSS) was evaluated at baseline, week 2, week 4, and week 8. The main outcome was the prediction of nonresponse. Nonresponse is defined as a

RCG z-score trajectory groups throughout pregnancy. A RCG z-score trajectory groups throughout pregnancy. B Proportions of Gestational diabetes mellitus in each trajectory group C To visualize the accuracy of assignment, Lasagne plots depicting the observed ZRCG throughout pregnancy for 110 randomly selected pregnancies from each trajectory group (restricted to aid the clarity of the plot) were compared to post-estimation plots
Odds ratios (ORs) and 95% confidence intervals (CIs) for the associations between maternal RCG z-score trajectory groups and maternal outcomes. GEE model, clustered on maternal identification numbers. Model 1: adjusted for child’s sex, birth year. Model 2: adjusted for model 1 and maternal birth region, maternal age, maternal education level, maternal BMI, and parity. P-values after applying the Benjamini-Hochberg (BH) procedure for controlling FDR are presented
Odds ratios (ORs) and 95% confidence intervals (CIs) for the associations between maternal RCG z-score trajectory groups and neonatal complications. GEE model, clustered on maternal identification numbers. Model 1: adjusted for child’s sex, birth year. Model 2: adjusted for model 1 and maternal birth region, maternal age, maternal education level, maternal BMI, and parity. P-values after applying the Benjamini-Hochberg (BH) procedure for controlling FDR are presented
Odds ratios (ORs) and 95% confidence intervals (CIs) for the associations between maternal RCG z-score trajectory groups and NDCs in offspring. GEE model, clustered on maternal identification numbers. Model 1: adjusted for child’s sex and birth year. Model 2: adjusted for model 1 and maternal birth region, maternal age, maternal education level, maternal BMI, maternal psychiatric history, and parity. P-values after applying the Benjamini-Hochberg (BH) procedure for controlling FDR are presented
Random capillary glucose levels throughout pregnancy, obstetric and neonatal outcomes, and long-term neurodevelopmental conditions in children: a group-based trajectory analysis

July 2023

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13 Reads

Background Gestational diabetes mellitus (GDM) is associated with both short- and long-term risks, although it is unknown if risks vary by severity, timing, and duration of gestational hyperglycemia. We aimed to identify trajectories of random capillary glucose (RCG) levels throughout pregnancy and assess their associations with both obstetric/neonatal outcomes and children’s risk of neurodevelopmental conditions (NDCs) (i.e., autism, intellectual disability, and attention-deficit/hyperactivity disorders [ADHD]). Methods A population-based cohort study was conducted involving 76,228 children born to 68,768 mothers without pregestational diabetes. Group-based trajectory modeling was utilized to identify distinct glucose trajectories across RCG values throughout the course of pregnancy. The associations between these trajectory groups and obstetric/neonatal outcomes as well as children’s NDCs were then assessed using generalized estimating equation models with a logit link. The Benjamini-Hochberg (BH) procedure was employed to adjust P-values for multiple comparisons, controlling the false discovery rate (FDR). Results Five distinct glucose trajectory groups were identified, each with varying percentages diagnosed with GDM. Their associations with obstetric/neonatal outcomes as well as children’s NDCs varied. For example, when compared to the “Persistently Low” group, other groups exhibited varying degrees of increased risk for large-for-gestational-age babies, with the exception of the “High in Early Pregnancy” group. Compared to the “Persistently Low” group, all other trajectory groups were associated with NDC outcomes, except the “High in Mid-Pregnancy” group. However, none of the associations with offspring NDCs remained significant after accounting for the FDR correction. Conclusions Persistent high glucose levels or moderately elevated glucose levels throughout pregnancy, as well as transient states of hyperglycemia in early or mid-pregnancy, were found to be associated with increased risks of specific obstetric and neonatal complications, and potentially offspring NDCs. These risks varied depending on the severity, timing, duration, and management of hyperglycemia. The findings underscore the need for continuous surveillance and individualized management strategies for women displaying different glucose trajectories during pregnancy. Limitations such as potential residual confounding, the role of mediators, and small sample size should be addressed in future studies.

Healthcare use attributable to COVID-19: a propensity-matched national electronic health records cohort study of 249,390 people in Wales, UK

July 2023

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21 Reads

Abstract Background To determine the extent and nature of changes associated with COVID-19 infection in terms of healthcare utilisation, this study observed healthcare contact 1 to 4 and 5 to 24 weeks following a COVID-19 diagnosis compared to propensity-matched controls. Methods Two hundred forty nine thousand three hundred ninety Welsh individuals with a positive reverse transcription–polymerase chain reaction (RT-PCR) test were identified from data from national PCR test results. After elimination criteria, 98,600 positive individuals were matched to test negative and never tested controls using propensity matching. Cohorts were split on test location. Tests could be taken in either the hospital or community. Controls were those who had tested negative in their respective environments. Survival analysis was utilised for first clinical outcomes which are grouped into primary and secondary. Primary outcomes include post-viral-illness and fatigue as an indication of long-COVID. Secondary outcomes include clinical terminology concepts for embolism, respiratory conditions, mental health conditions, fit notes, or hospital attendance. Increased instantaneous risk for positive individuals was quantified using hazard ratios (HR) from Cox regression, while absolute risk (AR) and relative risk were quantified using life table analysis. Results Analysis was conducted using all individuals and stratified by test location. Cases are compared to controls from the same test location. Fatigue (HR: 1.77, 95% CI: 1.34–2.25, p

Genetic analyses of VRK2 with major depression. A Genetic associations of SNPs spanning VRK2 region with major depression in European GWAS, and the epigenome signatures in human brains and cell types, lead to identification of a “potential regulatory region” and a regulatory SNP (rs2678907). A physical map of the region is given and depicts known genes within the region, and the LD is defined based on the SNP rs1568452. NPC, neural progenitor cells. B Association results of the 3 tested VRK2 SNPs with major depression in European and Han Chinese samples. C The linkage disequilibrium (LD) maps of the 3 tested VRK2 SNPs in European and Han Chinese individuals from 1000 Genomes Project. The figure was generated using the Haploview software, and the LD of the tested SNPs was calculated using r² algorithm implemented in the Haploview program
Effects of rs2678907 on enhancer activities and VRK2 mRNA expression. A Results of the reporter gene assay testing the regulatory activities of rs2678907 in SK-N-SH, U251, and HEK293T cell lines. “Negative control” means pGL3 basic empty vector (which does not have promoter activity). “Empty pGL3 vector” means pGL3 promoter empty vector (which has an internal promoter). The Y-axis values represent fold changes of luciferase activity relative to the “Empty pGL3 vector” group. The means and SD of at least three biological replicates are shown. B Expression quantitative trait loci (eQTL) analyses of rs2678907 with VRK2 mRNA in the CommonMind DLPFC (left), BrainSeq caudate nucleus (middle), and Braineac frontal cortex (right) tissues. The affective or bipolar cases in the eQTL datasets were not overlapped with the samples included in the meta-analysis of European GWAS samples
Knockout of Vrk2 leads to depressive-like behaviors in mice. A knockout efficiency of Vrk2 in the hippocampus. n = 3 mice/group. P = 0.000047. B Open field test. No significant difference was seen in the total distance (P = 0.576) and the central exploration time (P = 0.217) between Vrk2+/+ and Vrk2−/− mice. Vrk2+/+, n = 12. Vrk2−/−, n = 14. C Rotarod test. There was no difference in latency time (P = 0.932) between Vrk2+/+ and Vrk2−/− mice. Vrk2+/+, n = 12. Vrk2−/−, n = 14. D Elevated plus maze. The proportion of distance (P = 0.0640) covered by Vrk2−/− mice in the open arm was trending downward compared with Vrk2+/+ mice, but there was no difference in the amount of time spent there (P = 0.258). Vrk2+/+, n = 12. Vrk2−/−, n = 14. E Sucrose preference test. Vrk2+/+, n = 11. Vrk2−/−, n = 12. P = 0.265. F Tail suspension test. The immobility time (P = 0.438) was not different, but the curling time (P = 0.0016) was significantly decreased in Vrk2−/− mice. Vrk2+/+, n = 11. Vrk2−/−, n = 14. G Experimental timeline and schematic diagram of ventral hippocampal virus injection. H Rotarod test. Vrk2+/+ + ctrl, n = 8; Vrk2−/− + ctrl, n = 10; Vrk2+/+ + Vrk2, n = 7; Vrk2−/− + Vrk2, n = 10. Vrk2+/+ + ctrl vs. Vrk2−/− + ctrl, P = 0.380; Vrk2+/+ + ctrl vs. Vrk2−/− + Vrk2, P = 0.582; Vrk2−/− + ctrl vs. Vrk2−/− + Vrk2, P = 0.135. I Tail suspension test. Vrk2−/− + Vrk2 mice showed a considerably greater curling time compared with Vrk2−/− + ctrl mice (Vrk2+/+ + ctrl vs. Vrk2−/− + ctrl, P = 0.0229; Vrk2+/+ + ctrl vs. Vrk2−/− + Vrk2, P = 0.452; Vrk2−/− + ctrl vs. Vrk2−/− + Vrk2, P = 0.0022). Vrk2+/+ + ctrl, n = 8; Vrk2−/− + ctrl, n = 10; Vrk2+/+ + Vrk2, n = 7; Vrk2−/− + Vrk2, n = 10. Two-tailed t-test for A–F. One-way ANOVA for H and I. #P < 0.1, *P < 0.05, **P < 0.01, ***P < 0.001. Error bars indicate mean ± SD
Decreased Vrk2 expression in the hippocampus results in depressive-like behaviors in mice. A Experimental timeline and schematic diagram of ventral hippocampal virus injection. B The shRNA mediated Vrk2 knockdown (KD) efficiency in the ventral hippocampus. n = 3 mice/group. P = 0.0211. C Open field test. No effects were found in the total distance (P = 0.0907) and time spent in center (P = 0.219). Ctrl, n = 20. Vrk2-KD, n = 20. D Elevated plus maze. Decreasing trend in the percentage of time (P = 0.0698) that Vrk2-KD mice entering the open arms while the distance ratio (P = 0.405) into the open arms remains constant. Ctrl, n = 20. Vrk2-KD, n = 20. E Rotarod test. Ctrl, n = 20. Vrk2-KD, n = 20. P = 0.284. F Sucrose preference test. The percentage of sucrose preference (P < 0.0001) significantly decreased in Vrk2-KD mice. Ctrl, n = 20. Vrk2-KD, n = 20. G Tail suspension test. The immobility time (P = 0.351) was no difference, but the curling time (P = 0.0079) was significantly decreased in Vrk2-KD mice. Ctrl, n = 20. Vrk2-KD, n = 20. #P < 0.1,* P < 0.05, ** P < 0.01, *** P < 0.001 (two-tailed t-test). Error bars indicate mean ± SD
Reduced mushroom spine and modifications to synapse-associated proteins in the ventral hippocampus of Vrk2−/− mice. A Dendritic spine density and morphological analysis of Vrk2−/− mice ventral hippocampus pyramidal neurons. Scale bars represent 5 μm. With no difference in total density (P = 0.664), Vrk2−/− mice showed a much lower number of mushroom spines (P = 0.0265) and a significantly higher number of thin spines (P = 0.0039). Vrk2+/+, n = 37; Vrk2−/−, n = 40. Two-tailed t-tests were used to compare the total number of dendritic spines, and two-way ANOVA was used to determine the various morphologies. * P < 0.05, ** P < 0.01. B KEGG pathway and GO analyses of the 50 significantly down-regulated phosphorylated proteins in Vrk2−/− mice. C Protein–protein interaction (PPI) networks of the 50 significantly down-regulated phosphorylated proteins in Vrk2−/− mice. D Pclo phosphorylation at serine 1563 and Itpr2 phosphorylation at serine 937 were significantly downregulated after deletion of Vrk2 (P = 0.049 for Pclo and P = 0.010 for Itpr2, two-tailed t-test). n = 3 per group. Error bars indicate mean ± SD
Reduced Vrk2 expression is associated with higher risk of depression in humans and mediates depressive-like behaviors in mice

July 2023

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33 Reads

Background Genome-wide association studies (GWAS) have reported single-nucleotide polymorphisms (SNPs) in the VRK serine/threonine kinase 2 gene (VRK2) showing genome-wide significant associations with major depression, but the regulation effect of the risk SNPs on VRK2 as well as their roles in the illness are yet to be elucidated. Methods Based on the summary statistics of major depression GWAS, we conducted population genetic analyses, epigenome bioinformatics analyses, dual luciferase reporter assays, and expression quantitative trait loci (eQTL) analyses to identify the functional SNPs regulating VRK2; we also carried out behavioral assessments, dendritic spine morphological analyses, and phosphorylated 4D-label-free quantitative proteomics analyses in mice with Vrk2 repression. Results We identified a SNP rs2678907 located in the 5’ upstream of VRK2 gene exhibiting large spatial overlap with enhancer regulatory marks in human neural cells and brain tissues. Using luciferase reporter gene assays and eQTL analyses, the depression risk allele of rs2678907 decreased enhancer activities and predicted lower VRK2 mRNA expression, which is consistent with the observations of reduced VRK2 level in the patients with major depression compared with controls. Notably, Vrk2−/− mice exhibited depressive-like behaviors compared to Vrk2+/+ mice and specifically repressing Vrk2 in the ventral hippocampus using adeno-associated virus (AAV) lead to consistent and even stronger depressive-like behaviors in mice. Compared with Vrk2+/+ mice, the density of mushroom and thin spines in the ventral hippocampus was significantly altered in Vrk2−/− mice, which is in line with the phosphoproteomic analyses showing dysregulated synapse-associated proteins and pathways in Vrk2−/− mice. Conclusions Vrk2 deficiency mice showed behavioral abnormalities that mimic human depressive phenotypes, which may serve as a useful murine model for studying the pathophysiology of depression.

Targeted inhibition of PTPN22 is a novel approach to alleviate osteogenic responses in aortic valve interstitial cells and aortic valve lesions in mice

July 2023

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46 Reads

Background Calcific aortic valve disease (CAVD) is the most prevalent valvular disease and has high morbidity and mortality. CAVD is characterized by complex pathophysiological processes, including inflammation-induced osteoblastic differentiation in aortic valve interstitial cells (AVICs). Novel anti-CAVD agents are urgently needed. Protein tyrosine phosphatase nonreceptor type 22 (PTPN22), an intracellular nonreceptor-like protein tyrosine phosphatase, is involved in several chronic inflammatory diseases, including rheumatoid arthritis and diabetes. However, it is unclear whether PTPN22 is involved in the pathogenesis of CAVD. Methods We obtained the aortic valve tissue from human and cultured AVICs from aortic valve. We established CAVD mice model by wire injury. Transcriptome sequencing, western bolt, qPCR, and immunofluorescence were performed to elucidate the molecular mechanisms. Results Here, we determined that PTPN22 expression was upregulated in calcific aortic valve tissue, AVICs treated with osteogenic medium, and a mouse model of CAVD. In vitro, overexpression of PTPN22 induced osteogenic responses, whereas siRNA-mediated PTPN22 knockdown abolished osteogenic responses and mitochondrial stress in the presence of osteogenic medium. In vivo, PTPN22 ablation ameliorated aortic valve lesions in a wire injury-induced CAVD mouse model, validating the pathogenic role of PTPN22 in CAVD. Additionally, we discovered a novel compound, 13-hydroxypiericidin A 10-O-α-D-glucose (1 → 6)-β-D-glucoside (S18), in a marine-derived Streptomyces strain that bound to PTPN22 with high affinity and acted as a novel inhibitor. Incubation with S18 suppressed osteogenic responses and mitochondrial stress in human AVICs induced by osteogenic medium. In mice with aortic valve injury, S18 administration markedly alleviated aortic valve lesions. Conclusion PTPN22 plays an essential role in the progression of CAVD, and inhibition of PTPN22 with S18 is a novel option for the further development of potent anti-CAVD drugs. Graphical Abstract Therapeutic inhibition of PTPN22 retards aortic valve calcification through modulating mitochondrial dysfunction in AVICs.

Percentage of cortical thickness (upper panel) and surface area (lower panel) changes in patients with schizophrenia (left) and healthy controls (HC). Blue color indicates a decreased value at follow-up compared to baseline measurements, whereas red color indicates an increased value
Significant group by time interaction effect (A) and group effect (B) on brain structural measurements. T-statistics from linear mix-effects model was plotted on the left, with blue color indicating lower values or accelerated decrease in patients, while red indicates the opposite. For significant regions, cortical thickness and volume in patients (SZ) and controls (HC) at baseline (BL) and follow-up (FU) were plotted on the right. Abbreviations: L: left, R: right, SFG: superior frontal gyrus, cauACC: caudal anterior cingulate cortex, rosMFG, rostral middle frontal gyrus, SPL: superior parietal lobule, IPL: inferior parietal lobule, latOL: lateral occipital lobe, EC: entorhinal cortex
Association between brain structural changes and transcriptional profiles of inflammation and antipsychotic response. A Transcriptional data were retrieved from the Allen Human Brain Atlas (AHBA) [25] (http://human.brain-map.org/) and calculated for gene sets of interests [29–31] (Additional file 1: Table S1). Brain structural changes (cortical thickness and surface area) were calculated for patients with schizophrenia (SZ) and healthy controls (HC) as illustrated in Fig. 1. B A significant correlation was found between monocyte-related gene expression and cortical thickness changes in patients with schizophrenia (r = 0.54, p < 0.01) but not in healthy controls (r =  − 0.05, p = 0.76). C The normalized monocyte gene expression profile from a systematic review on leukocyte and subtypes [29]. D Association between monocyte gene expression and cortical thickness changes in patients is significantly higher than the null model generated by correlations between 5000 surrogate maps and monocyte gene expression profile (pspin = 0.001)
Correlation analysis between brain structure changes and cognitive score changes in patients (A) and controls (B). A significant association was found between the left superior parietal lobule (SPL) cortical thickness change and WAIS digital span (backward) change in patients (r = 0.57, p = 3.4 × 10⁻⁴) but not in controls (r = 0.09, p = 0.54)
Transcriptional level of inflammation markers associates with short-term brain structural changes in first-episode schizophrenia

July 2023

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99 Reads

Abstract Background Inflammation has been implicated in the pathology of schizophrenia and may cause neuronal cell death and dendrite loss. Neuroimaging studies have highlighted longitudinal brain structural changes in patients with schizophrenia, yet it is unclear whether this is related to inflammation. We aim to address this question, by relating brain structural changes with the transcriptional profile of inflammation markers in the early stage of schizophrenia. Methods Thirty-eight patients with first-episode schizophrenia and 51 healthy controls were included. High-resolution T1-weighted magnetic resonance imaging (MRI) and clinical assessments were performed at baseline and 2 ~ 6 months follow-up for all subjects. Changes in the brain structure were analyzed using surface-based morphological analysis and correlated with the expression of immune cells-related gene sets of interest reported by previous reviews. Transcriptional data were retrieved from the Allen Human Brain Atlas. Furthermore, we examined the brain structural changes and peripheral inflammation markers in association with behavioral symptoms and cognitive functioning in patients. Results Patients exhibited accelerated cortical thickness decrease in the left frontal cortices, less decrease or an increase in the superior parietal lobule and right lateral occipital lobe, and increased volume in the bilateral pallidum, compared with controls. Changes in cortical thickness correlated with the transcriptional level of monocyte across cortical regions in patients (r = 0.54, p

Factor loadings for obesity-related dietary pattern derived from reduced rank regression
Dose–response associations between obesity-related DP Z-scores and risks of overall cancer and 19 site-specific cancers. All analyses were stratified by sex and study region and adjusted for age, ethnicity, Townsend deprivation index, education attainment, physical activity, smoking status, total energy intake per day (log-transformed), and history of CVD. Models for cervix, ovary, and endometrium cancers were adjusted for HRT use, oral contraceptive use, and menopause after excluding females with a history of hysterectomy (n = 2980). Additionally, Model for premenopausal and postmenopausal cancer was adjusted for HRT use and oral contraceptive use. We set the lowest dietary Z-score as reference
Associations between obesity-related DP Z-scores and risk of overall cancer by a combination of age groups and sexes. All analyses were stratified by sex and study region and adjusted for age, ethnicity, Townsend deprivation index, education attainment, physical activity, smoking status, and total energy intake per day (log-transformed)
Conceptual diagram for paralleled mediation model. All analyses were adjusted for age, sex, ethnicity, study region, Townsend deprivation index, education attainment, physical activity, smoking status, and total energy intake per day (log-transformed)
Associations between an obesity-related dietary pattern and incidence of overall and site-specific cancers: a prospective cohort study

July 2023

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38 Reads

Abstract Background A dietary pattern (DP) may impact on cancer incidence more strongly than individual foods, but this association remains uncertain. Here, we aimed to broadly explore the associations of an obesity-related DP with overall and 19 site-specific cancers. Methods This study included 114,289 cancer-free participants with at least two dietary assessments. A total of 210 food items were classified into 47 food groups, and the mean amount of each food group was used in reduced-rank regression to derive the obesity-related DP. Cox regressions were conducted to explore the associations of the obesity-related DP with overall and 19 site-specific cancers. The parallel mediation model was constructed to quantify the mediating roles of potential mediators. Results During a median follow-up period of 9.4 years, 10,145 (8.9%) incident cancer cases were documented. The derived-DP was characterized by a higher intake of beer and cider, processed meat, high sugar beverages, red meat, and artificial sweetener, and a lower intake of fresh vegetables, olive oil, tea, and high fiber breakfast cereals. Observational analysis showed that a higher obesity-related DP Z-score was linearly associated with an increased risk of overall cancer (adjusted hazard ratio (HR) = 1.02, 95% CI: 1.01, 1.04 per 1-SD increase, corrected P

Study flow diagram of study participants
Varevape single — study design. Exclusive daily EC users who intended to quit vaping were randomized to receive either varenicline, 1 mg, twice daily for 12 weeks or matched placebo for 12 weeks. Subjects were prospectively reviewed for up to 24 weeks during which vaping habits, questionnaire answers, adverse events, and vital signs were assessed at each visit. The telephone symbol indicates telephone contact
Efficacy CAR. Proportion of participants who reported abstinence from vaping, which was defined by cotinine level-verified self-reported abstinence. Primary efficacy end point was the continuous abstinence rate at weeks 4 to 12
Varenicline and counseling for vaping cessation: a double-blind, randomized, parallel-group, placebo-controlled trial

July 2023

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21 Reads

Background Vaping cessation is virtually unexplored. The efficacy and safety of varenicline for vaping cessation has not been studied and rigorous research is required to advance best practice and outcomes for people who use electronic cigarettes (EC) and want to quit. The objective is to evaluate the efficacy and safety of varenicline (1 mg BID, administered for 12 weeks, with follow-up to week 24) combined with vaping cessation counseling in exclusive daily EC users intending to quit vaping. Methods Design: Double-blind, randomized, parallel-group, placebo-controlled trial. Setting: The study took place at a University-run smoking cessation center. Participants: People who exclusively use ECs daily and intend to quit vaping. Intervention: A total of 140 subjects were randomized to either varenicline (1 mg, administered twice daily for 12 weeks) plus counseling or placebo treatment (administered twice daily, for 12 weeks) plus counseling. The trial consisted of a 12-week treatment phase followed by a 12-week follow-up, nontreatment phase. Main outcomes and measures: The primary efficacy endpoint of the study was biochemically validated continuous abstinence rate (CAR) at weeks 4 to 12. Secondary efficacy end points were CAR at weeks 4 to 24 and 7-day point prevalence of vaping abstinence at weeks 12 and 24. Results CAR was significantly higher for varenicline vs placebo at each interval: weeks 4–12, 40.0% and 20.0%, respectively (OR = 2.67, 95% CI = [1.25–5.68], P = 0.011); weeks 4–24, 34.3% for varenicline with counseling and 17.2% for placebo with counseling (OR = 2.52, 95% CI = [1.14–5.58], P = 0.0224). The 7-day point prevalence of vaping abstinence was also higher for the varenicline than placebo at each time point. Serious adverse events were infrequent in both groups and not treatment-related. Conclusions The findings of the present RCT indicate that inclusion of varenicline in a vaping cessation program for people who use electronic cigarettes and intending to quit may result in prolonged abstinence. These positive findings establish a benchmark of intervention effectiveness, may support the use of varenicline combined with counseling in vaping cessation programs, and may also help guiding future recommendations by health authorities and healthcare providers. Trial registration The study has been registered in EUDRACT with Trial registration ID: 2016-000339-42.

Example of choice task. Respondents were asked to choose their preferred rapid diagnostic test (RDT)
Probability of preferring an RDT to RT-PCR. A. Probability of preferring an RDT with a specificity of 95% and a time-to-result of 20 min. B. Probability of preferring an RDT with a specificity of 95% and a time-to-result of 60 min. C. Probability of preferring an RDT with a specificity of 90% and a time-to-result of 20 min. D. Probability of preferring an RDT with a specificity of 90% and a time-to-result of 60 min
Informing a target product profile for rapid tests to identify HBV-infected pregnant women with high viral loads: a discrete choice experiment with African healthcare workers

July 2023

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51 Reads

Background Elimination of mother-to-child transmission of hepatitis B virus (HBV) requires infant immunoprophylaxis and antiviral prophylaxis for pregnant women with high viral loads. Since real-time polymerase chain reaction (RT-PCR), a gold standard for assessing antiviral eligibility, is neither accessible nor affordable for women living in low-income and middle-income countries (LMICs), rapid diagnostic tests (RDTs) detecting alternative HBV markers may be needed. To inform future development of the target product profile (TPP) for RDTs to identify highly viremic women, we used a discrete choice experiment (DCE) and elicited preference and trade-off of healthcare workers (HCW) in Africa between the following four attributes of fictional RDTs: price, time-to-result, diagnostic sensitivity, and specificity. Methods Through an online questionnaire survey, we asked participants to indicate their preferred test from a set of two RDTs in seven choice tasks with varying levels of the four attributes. We used mixed multinomial logit models to quantify the utility gain or loss generated by each attribute. We attempted to define minimal and optimal criteria for test attributes that can satisfy ≥ 70% and ≥ 90% of HCWs, respectively, as an alternative to RT-PCR. Results A total of 555 HCWs from 41 African countries participated. Increases in sensitivity and specificity generated significant utility and increases in cost and time-to-result generated significant disutility. The size of the coefficients for the highest attribute levels relative to the reference levels were in the following order: sensitivity (β = 3.749), cost (β = -2.550), specificity (β = 1.134), and time-to-result (β = -0.284). Doctors cared most about test sensitivity, while public health practitioners cared about cost and midwives about time-to-result. For an RDT with 95% specificity, costing 1 US$, and yielding results in 20 min, the minimally acceptable test sensitivity would be 82.5% and the optimally acceptable sensitivity would be 87.5%. Conclusions African HCWs would prefer an RDT with the following order of priority: higher sensitivity, lower cost, higher specificity, and shorter time-to-result. The development and optimization of RDTs that can meet the criteria are urgently needed to scale up the prevention of HBV mother-to-child transmission in LMICs.

Logic model for the projected effects of multimedia information in trial recruitment
Pathway through each SWAT. Note: In the FORCE SWAT, only two allocations were used (MMI-only and PIS-only)
Flow of participants through each SWAT
Forest plot of trial recruitment in the MMI-only and PIS-only arms for the mITT
Providing multimedia information to children and young people increases recruitment to trials: pre-planned meta-analysis of SWATs

July 2023

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24 Reads

Background Randomised controlled trials are often beset by problems with poor recruitment and retention. Information to support decisions on trial participation is usually provided as printed participant information sheets (PIS), which are often long, technical, and unappealing. Multimedia information (MMI), including animations and videos, may be a valuable alternative or complement to a PIS. The Trials Engagement in Children and Adolescents (TRECA) study compared MMI to PIS to investigate the effects on participant recruitment, retention, and quality of decision-making. Methods We undertook six SWATs (Study Within A Trial) within a series of host trials recruiting children and young people. Potential participants in the host trials were randomly allocated to receive MMI-only, PIS-only, or combined MMI + PIS. We recorded the rates of recruitment and retention (varying between 6 and 26 weeks post-randomisation) in each host trial. Potential participants approached about each host trial were asked to complete a nine-item Decision-Making Questionnaire (DMQ) to indicate their evaluation of the information and their reasons for participation/non-participation. Odds ratios were calculated and combined in a meta-analysis. Results Data from 3/6 SWATs for which it was possible were combined in a meta-analysis (n = 1758). Potential participants allocated to MMI-only were more likely to be recruited to the host trial than those allocated to PIS-only (OR 1.54; 95% CI 1.05, 2.28; p = 0.03). Those allocated to combined MMI + PIS compared to PIS-only were no more likely to be recruited to the host trial (OR = 0.89; 95% CI 0.53, 1.50; p = 0.67). Providing MMI rather than PIS did not impact on DMQ scores. Once children and young people had been recruited to host trials, their trial retention rates did not differ according to intervention allocation. Conclusions Providing MMI-only increased the trial recruitment rate compared to PIS-only but did not affect DMQ scores. Combined MMI + PIS instead of PIS had no effect on recruitment or retention. MMIs are a useful tool for trial recruitment in children and young people, and they could reduce trial recruitment periods.

Study flowchart
Spider plot showing changes in tumor burden over time
Waterfall plot showing the best percentage change from baseline of PN target lesions
Plasma concentration of FCN-159 in A, single- and B, multiple-dose regimens. Graphs on the left of the panel are linear scale, and those on the right are semi-log scale
Phase 1 dose-escalation study to evaluate the safety, tolerability, pharmacokinetics, and anti-tumor activity of FCN-159 in adults with neurofibromatosis type 1-related unresectable plexiform neurofibromas

July 2023

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17 Reads

Background Surgery is a common treatment strategy for patients with neurofibromatosis type 1 (NF1)-related plexiform neurofibroma (PN) and has limited efficacy. FCN-159 is a novel anti-tumorigenic drug via selective inhibition of MEK1/2. This study assesses the safety and efficacy of FCN-159 in patients with NF1-related PN. Methods This is a multicenter, open-label, single-arm, phase I dose-escalation study. Patients with NF1-related PN that was non-resectable or unsuitable for surgery were enrolled; they received FCN-159 monotherapy daily in 28-day cycles. Results Nineteen adults were enrolled in the study, 3 in 4 mg, 4 in 6 mg, 8 in 8 mg, and 4 in 12 mg. Among patients included in dose-limiting toxicity (DLT) analysis, DLTs (grade 3 folliculitis) were reported in 1 of 8 patients (16.7%) receiving 8 mg and 3 of 3 (100%) patients receiving 12 mg. The maximum tolerated dose was determined to be 8 mg. FCN-159-related treatment-emergent adverse events (TEAEs) were observed in 19 patients (100%); most of which were grade 1 or 2. Nine (47.4%) patients reported grade 3 study-drug–related TEAEs across all dose levels, including four experiencing paronychia and five experiencing folliculitis. Of the 16 patients analyzed, all (100%) had reduced tumor size and six (37.5%) achieved partial responses; the largest reduction in tumor size was 84.2%. The pharmacokinetic profile was approximately linear between 4 and 12 mg, and the half-life supported once daily dosing. Conclusions FCN-159 was well tolerated up to 8 mg daily with manageable adverse events and showed promising anti-tumorigenic activity in patients with NF1-related PN, warranting further investigation in this indication. Trial registration ClinicalTrials.gov, NCT04954001. Registered 08 July 2021.


Sampling inequalities affect generalization of neuroimaging-based diagnostic classifiers in psychiatry

July 2023

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169 Reads

Abstract Background The development of machine learning models for aiding in the diagnosis of mental disorder is recognized as a significant breakthrough in the field of psychiatry. However, clinical practice of such models remains a challenge, with poor generalizability being a major limitation. Methods Here, we conducted a pre-registered meta-research assessment on neuroimaging-based models in the psychiatric literature, quantitatively examining global and regional sampling issues over recent decades, from a view that has been relatively underexplored. A total of 476 studies (n = 118,137) were included in the current assessment. Based on these findings, we built a comprehensive 5-star rating system to quantitatively evaluate the quality of existing machine learning models for psychiatric diagnoses. Results A global sampling inequality in these models was revealed quantitatively (sampling Gini coefficient (G) = 0.81, p

Associations between post-acute care setting following hip fracture and outcomes up to one year after discharge from post-acute care, 2012–2018. Presents risk ratios and hazard ratios before and after inverse probability of treatment weighting. Covariates included in adjusted models are listed in Additional file 1: Table S2. Abbreviations: CI, confidence interval; FRI, fall-related injuries; HHC, Home Health Care; HR, hazard ratio; IPW, inverse probability of treatment weighting; IRF, Inpatient Rehabilitation Facilities; RR, risk ratio; SNF, Skilled Nursing Facilities
Associations between post-acute care setting following hip fracture and specific fall-related injury outcomes up to one year after discharge from post-acute care, 2012–2018. Presents risk ratios and hazard ratios before and after inverse probability of treatment weighting. Covariates included in adjusted models are listed in Additional file 1: Table S2. Abbreviations: CI, confidence interval; FRI, fall-related injuries; HHC, Home Health Care; HR, hazard ratio; IPW, inverse probability of treatment weighting; IRF, Inpatient Rehabilitation Facilities; RR, risk ratio; SNF, Skilled Nursing Facilities
Evaluation of post-acute care and one-year outcomes among Medicare beneficiaries with hip fractures: a retrospective cohort study

July 2023

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8 Reads

Background Post-acute care (PAC) services after hospitalization for hip fracture are typically provided in skilled nursing facilities (SNFs), inpatient rehabilitation facilities (IRFs), or at home via home health care (HHC). Little is known about the clinical course following PAC for hip fracture. We examined the nationwide burden of adverse outcomes by PAC setting in the year following discharge from PAC for hip fracture. Methods This retrospective cohort included Medicare Fee-for-Service beneficiaries > 65 years who received PAC services in U.S. SNFs, IRFs, or HHC following hip fracture hospitalization between 2012 and 2018. Individuals who had a fall-related injury (FRI) during PAC or received PAC services in multiple settings were excluded. Primary outcomes included FRIs, all-cause hospital readmissions, and death in the year following discharge from PAC. Cumulative incidences and incidence rates for adverse outcomes were reported by PAC setting. Exploratory analyses examined risk ratios and hazard ratios between settings before and after inverse-probability-of-treatment-weighting, which accounted for 43 covariates. Results Among 624,631 participants (SNF, 67.78%; IRF, 16.08%; HHC, 16.15%), the mean (standard deviation) age was 82.70 (8.26) years, 74.96% were female, and 91.30% were non-Hispanic White. Crude incidence rates (95%CLs) per 1000 person-years were highest among individuals receiving SNF care for FRIs (SNF, 123 [121, 123]; IRF, 105 [102, 107]; HHC, 89 [87, 91]), hospital readmission (SNF, 623 [619, 626]; IRF, 538 [532, 544]; HHC, 418 [414, 423]), and death (SNF, 167 [165, 169]; IRF, 47 [46, 49]; HHC, 55 [53, 56]). Overall, rates of adverse outcomes generally remained higher among SNF care recipients after covariate adjustment. However, inferences about the group with greater adverse outcomes differed for FRIs and hospital readmissions based on risk ratio or hazard ratio estimates. Conclusions In this retrospective cohort study of individuals hospitalized for hip fracture, rates of adverse outcomes in the year following PAC were common, especially among SNF care recipients. Understanding risks and rates of adverse events can inform future efforts to improve outcomes for older adults receiving PAC for hip fracture. Future work should consider calculating risk and rate measures to assess the influence of differential time under observation across PAC groups.

PRISMA flowchart diagram
Analysis of phase III clinical trials in metastatic NSCLC to assess the correlation between QoL results and survival outcomes

July 2023

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25 Reads

Background In addition to improving survival outcomes, new oncology treatments should lead to amelioration of patients’ quality of life (QoL). Herein, we examined whether QoL results correlated with PFS and OS outcomes in phase III randomized controlled trials (RCTs) investigating new systemic treatments in metastatic non-small cell lung cancer (NSCLC). Methods The systematic search of PubMed was conducted in October 2022. We identified 81 RCTs testing novel drugs in metastatic NSCLC and published in the English language in a PubMed-indexed journal between 2012 and 2021. Only trials reporting QoL results and at least one survival outcome between OS and PFS were selected. For each RCT, we assessed whether global QoL was “superior,” “inferior,” or with “non-statistically significant difference” in the experimental arm compared to the control arm. Results Experimental treatments led to superior QoL in 30 (37.0%) RCTs and inferior QoL in 3 (3.7%) RCTs. In the remaining 48 (59.3%) RCTs, a statistically significant difference between the experimental and control arms was not found. Of note, we found a statistically significant association between QoL and PFS improvements (X² = 3.93, p = 0.0473). In more detail, this association was not significant in trials testing immunotherapy or chemotherapy. On the contrary, in RCTs testing target therapies, QoL results positively correlated with PFS outcomes (p = 0.0196). This association was even stronger in the 32 trials testing EGFR or ALK inhibitors (p = 0.0077). On the other hand, QoL results did not positively correlate with OS outcomes (X² = 0.81, p = 0.368). Furthermore, we found that experimental treatments led to superior QoL in 27/57 (47.4%) trials with positive results and in 3/24 (12.5%) RCTs with negative results (p = 0.0028). Finally, we analyzed how QoL data were described in publications of RCTs in which QoL outcomes were not improved (n = 51). We found that a favorable description of QoL results was associated with sponsorship by industries (p = 0.0232). Conclusions Our study reveals a positive association of QoL results with PFS outcomes in RCTs testing novel treatments in metastatic NSCLC. This association is particularly evident for target therapies. These findings further emphasize the relevance of an accurate assessment of QoL in RCTs in NSCLC.

Global, regional, and national burden of cardiovascular diseases in youths and young adults aged 15–39 years in 204 countries/territories, 1990–2019: a systematic analysis of Global Burden of Disease Study 2019

June 2023

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69 Reads

Background Understanding the temporal trends in the burden of overall and type-specific cardiovascular diseases (CVDs) in youths and young adults and its attributable risk factors is important for effective and targeted prevention strategies and measures. We aimed to provide a standardized and comprehensive estimation of the prevalence, incidence, disability-adjusted life years (DALY), and mortality rate of CVDs and its associated risk factors in youths and young adults aged 15–39 years at global, regional, and national levels. Methods We applied Global Burden of Disease, Injuries, and Risk Factors Study (GBD) 2019 analytical tools to calculate the age-standardized incidence, prevalence, DALY, and mortality rate of overall and type-specific CVDs (i.e., rheumatic heart disease, ischemic heart disease, stroke, hypertensive heart disease, non-rheumatic valvular heart disease, cardiomyopathy and myocarditis, atrial fibrillation and flutter, aortic aneurysm, and endocarditis) among youths and young adults aged 15–39 years by age, sex, region, sociodemographic index and across 204 countries/territories from 1990 to 2019, and proportional DALY of CVDs attributable to associated risk factors. Results The global age-standardized DALY (per 100,000 population) for CVDs in youths and young adults significantly decreased from 1257.51 (95% confidence interval 1257.03, 1257.99) in 1990 to 990.64 (990.28, 990.99) in 2019 with an average annual percent change (AAPC) of − 0.81% (− 1.04%, − 0.58%, P < 0.001), and the age-standardized mortality rate also significantly decreased from 19.83 (19.77, 19.89) to 15.12 (15.08, 15.16) with an AAPC of − 0.93% (− 1.21%, − 0.66%, P < 0.001). However, the global age-standardized incidence rate (per 100,000 population) moderately increased from 126.80 (126.65, 126.95) in 1990 to 129.85 (129.72, 129.98) in 2019 with an AAPC of 0.08% (0.00%, 0.16%, P = 0.040), and the age-standardized prevalence rate significantly increased from 1477.54 (1477.03, 1478.06) to 1645.32 (1644.86, 1645.78) with an AAPC of 0.38% (0.35%, 0.40%, P < 0.001). In terms of type-specific CVDs, the age-standardized incidence and prevalence rate in rheumatic heart disease, prevalence rate in ischemic heart disease, and incidence rate in endocarditis increased from 1990 to 2019 (all P < 0.001). When stratified by sociodemographic index (SDI), the countries/territories with low and low-middle SDI had a higher burden of CVDs than the countries/territories with high and high-middle SDI. Women had a higher prevalence rate of CVDs than men, whereas men had a higher DALY and mortality rate than women. High systolic blood pressure, high body mass index, and low-density lipoprotein cholesterol were the main attributable risk factors for DALY of CVDs for all included countries and territories. Household air pollution from solid fuels was an additional attributable risk factor for DALY of CVDs in low and low-middle SDI countries compared with middle, high-middle, and high SDI countries. Compared with women, DALY for CVDs in men was more likely to be affected by almost all risk factors, especially for smoking. Conclusions There is a substantial global burden of CVDs in youths and young adults in 2019. The burden of overall and type-specific CVDs varied by age, sex, SDI, region, and country. CVDs in young people are largely preventable, which deserve more attention in the targeted implementation of effective primary prevention strategies and expansion of young-people’s responsive healthcare systems.

Aberrant palmitoylation caused by a ZDHHC21 mutation contributes to pathophysiology of Alzheimer’s disease

June 2023

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36 Reads

Background The identification of pathogenic mutations in Alzheimer’s disease (AD) causal genes led to a better understanding of the pathobiology of AD. Familial Alzheimer’s disease (FAD) is known to be associated with mutations in the APP, PSEN1, and PSEN2 genes involved in Aβ production; however, these genetic defects occur in only about 10–20% of FAD cases, and more genes and new mechanism causing FAD remain largely obscure. Methods We performed exome sequencing on family members with a FAD pedigree and identified gene variant ZDHHC21 p.T209S. A ZDHHC21T209S/T209S knock-in mouse model was then generated using CRISPR/Cas9. The Morris water navigation task was then used to examine spatial learning and memory. The involvement of aberrant palmitoylation of FYN tyrosine kinase and APP in AD pathology was evaluated using biochemical methods and immunostaining. Aβ and tau pathophysiology was evaluated using ELISA, biochemical methods, and immunostaining. Field recordings of synaptic long-term potentiation were obtained to examine synaptic plasticity. The density of synapses and dendritic branches was quantified using electron microscopy and Golgi staining. Results We identified a variant (c.999A > T, p.T209S) of ZDHHC21 gene in a Han Chinese family. The proband presented marked cognitive impairment at 55 years of age (Mini-Mental State Examination score = 5, Clinical Dementia Rating = 3). Considerable Aβ retention was observed in the bilateral frontal, parietal, and lateral temporal cortices. The novel heterozygous missense mutation (p.T209S) was detected in all family members with AD and was not present in those unaffected, indicating cosegregation. ZDHHC21T209S/T209S mice exhibited cognitive impairment and synaptic dysfunction, suggesting the strong pathogenicity of the mutation. The ZDHHC21 p.T209S mutation significantly enhanced FYN palmitoylation, causing overactivation of NMDAR2B, inducing increased neuronal sensitivity to excitotoxicity leading to further synaptic dysfunction and neuronal loss. The palmitoylation of APP was also increased in ZDHHC21T209S/T209S mice, possibly contributing to Aβ production. Palmitoyltransferase inhibitors reversed synaptic function impairment. Conclusions ZDHHC21 p.T209S is a novel, candidate causal gene mutation in a Chinese FAD pedigree. Our discoveries strongly suggest that aberrant protein palmitoylation mediated by ZDHHC21 mutations is a new pathogenic mechanism of AD, warranting further investigations for the development of therapeutic interventions.

PRISMA diagram for selection of studies
Median, IQR and ranges of reported estimates of rates of RSV-associated hospitalisation in high-income countries. ALRI, acute lower respiratory infection; ARI, acute respiratory infection; C&R, circulatory and respiratory; CRD, chronic respiratory infection; P&I, pneumonia and influenza. Y-axis is displayed in log scale. The dotted line is used for distinguishing the estimates for broader age groups from finer age groups. Number at the bottom of each panel indicates number of data-points, if studies reported estimates for multiple years or seasons, then this study contributes to multiple data points. This data is available in Additional file 1: Tables S5-S6, S8-10
Comparison of modelled and recorded estimates by age group for studies reporting RSV-associated hospitalisation rates. The y-axis represents the ratio of recorded estimates to modelled estimates and is displayed in log scale. Number at the bottom of indicates number of data-points, if studies reported estimates for multiple years or seasons, then this study contributes to multiple data points. Recorded estimates, also called directly observed number/rate, represents hospital admissions with laboratory confirmed virus infection. Modelled estimates represent hospital admissions rate estimated from statistical models
Median, IQR and ranges of reported estimates of rates of RSV-associated mortality. ARI, acute respiratory infection; C&R, circulatory and respiratory; P&I, pneumonia and influenza. Y-axis is displayed in log scale. The dotted line is used for distinguishing the estimates for broader age groups from finer age groups. Number at the bottom of each panel indicates number of data-points, if studies reported estimates for multiple years or seasons, then this study contributes to multiple data points. This data is available in Additional file 1: Tables S4-5, S7-9, 11–13
Understanding the age spectrum of respiratory syncytial virus associated hospitalisation and mortality burden based on statistical modelling methods: a systematic analysis

June 2023

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37 Reads

Abstract Background Statistical modelling studies based on excess morbidity and mortality are important for understanding RSV disease burden for age groups that are less frequently tested for RSV. We aimed to understand the full age spectrum of RSV morbidity and mortality burden based on statistical modelling studies, as well as the value of modelling studies in RSV disease burden estimation. Methods The databases Medline, Embase and Global Health were searched to identify studies published between January 1, 1995, and December 31, 2021, reporting RSV-associated excess hospitalisation or mortality rates of any case definitions using a modelling approach. All reported rates were summarised using median, IQR (Interquartile range) and range by age group, outcome and country income group; where applicable, a random-effects meta-analysis was conducted to combine the reported rates. We further estimated the proportion of RSV hospitalisations that could be captured in clinical databases. Results A total of 32 studies were included, with 26 studies from high-income countries. RSV-associated hospitalisation and mortality rates both showed a U-shape age pattern. Lowest and highest RSV acute respiratory infection (ARI) hospitalisation rates were found in 5–17 years (median: 1.6/100,000 population, IQR: 1.3–18.5) and

Prevalence of preschool children in seven cities of China in 2011 and 2019
Prevalence, risk factors, impact and management of pneumonia among preschool children in Chinese seven cities: a cross-sectional study with interrupted time series analysis

June 2023

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Background Pneumonia is a common disease worldwide in preschool children. Despite its large population size, China has had no comprehensive study of the national prevalence, risk factors, and management of pneumonia among preschool children. We therefore investigated the prevalence of pneumonia among preschool children in Chinese seven representative cities, and explore the possible risk factors of pneumonia on children, with a view to calling the world's attention to childhood pneumonia to reduce the prevalence of childhood pneumonia. Methods Two group samples of 63,663 and 52,812 preschool children were recruited from 2011 and 2019 surveys, respectively. Which were derived from the cross-sectional China, Children, Homes, Health (CCHH) study using a multi-stage stratified sampling method. This survey was conducted in kindergartens in seven representative cities. Exclusion criteria were younger than 2 years old or older than 8 years old, non-permanent population, basic information such as gender, date of birth and breast feeding is incomplete. Pneumonia was determined on the basis of parents reported history of clearly diagnosed by the physician. All participants were assessed with a standard questionnaire. Risk factors for pneumonia, and association between pneumonia and other respiratory diseases were examined by multivariable-adjusted analyses done in all participants for whom data on the variables of interest were available. Disease management was evaluated by the parents’ reported history of physician diagnosis, longitudinal comparison of risk factors in 2011 and 2019. Results In 2011 and 2019, 31,277 (16,152 boys and 15,125 girls) and 32,016 (16,621 boys and 15,395 girls) preschool children aged at 2–8 of permanent population completed the questionnaire, respectively, and were thus included in the final analysis. The findings showed that the age-adjusted prevalence of pneumonia in children was 32.7% in 2011 and 26.4% in 2019. In 2011, girls (odds ratio [OR] 0.91, 95%CI [confidence interval]0.87–0.96; p = 0.0002), rural (0.85, 0.73–0.99; p = 0.0387), duration of breastfeeding ≥ 6 months(0.83, 0.79–0.88; p < 0.0001), birth weight (g) ≥ 4000 (0.88, 0.80–0.97; p = 0.0125), frequency of putting bedding to sunshine (Often) (0.82, 0.71–0.94; p = 0.0049), cooking fuel type (electricity) (0.87, 0.80–0.94; p = 0.0005), indoor use air-conditioning (0.85, 0.80–0.90; p < 0.0001) were associated with a reduced risk of childhood pneumonia. Age (4–6) (1.11, 1.03–1.20; p = 0.0052), parental smoking (one) (1.12, 1.07–1.18; p < 0.0001), used antibiotics (2.71, 2.52–2.90; p < 0.0001), history of parental allergy (one and two) (1.21, 1.12–1.32; p < 0.0001 and 1.33, 1.04–1.69; p = 0.0203), indoor dampness (1.24, 1.15–1.33; p < 0.0001), home interior decoration (1.11, 1.04–1.19; p = 0.0013), Wall painting materials (Paint) (1.16, 1.04–1.29; p = 0.0084), flooring materials (Laminate / Composite wood) (1.08, 1.02–1.16; p = 0.0126), indoor heating mode(Central heating)(1.18, 1.07–1.30, p = 0.0090), asthma (2.38, 2.17–2.61; p < 0.0001), allergic rhinitis (1.36, 1.25–1.47; p < 0.0001), wheezing (1.64, 1.55–1.74; p < 0.0001) were associated with an elevated risk of childhood pneumonia; pneumonia was associated with an elevated risk of childhood asthma (2.53, 2.31–2.78; p < 0.0001), allergic rhinitis (1.41, 1.29–1.53; p < 0.0001) and wheezing (1.64, 1.55–1.74; p < 0.0001). In 2019, girls (0.92, 0.87–0.97; p = 0.0019), duration of breastfeeding ≥ 6 months (0.92, 0.87–0.97; p = 0.0031), used antibiotics (0.22, 0.21–0.24; p < 0.0001), cooking fuel type (Other) (0.40, 0.23–0.63; p = 0.0003), indoor use air-conditioning (0.89, 0.83–0.95; p = 0.0009) were associated with a reduced risk of childhood pneumonia. Urbanisation (Suburb) (1.10, 1.02–1.18; p = 0.0093), premature birth (1.29, 1.08–1.55; p = 0.0051), birth weight (g) < 2500 (1.17, 1.02–1.35; p = 0.0284), parental smoking (1.30, 1.23–1.38; p < 0.0001), history of parental asthma (One) (1.23, 1.03–1.46; p = 0.0202), history of parental allergy (one and two) (1.20, 1.13–1.27; p < 0.0001 and 1.22, 1.08–1.37; p = 0.0014), cooking fuel type (Coal) (1.58, 1.02–2.52; p = 0.0356), indoor dampness (1.16, 1.08–1.24; p < 0.0001), asthma (1.88, 1.64–2.15; p < 0.0001), allergic rhinitis (1.57, 1.45–1.69; p < 0.0001), wheezing (2.43, 2.20–2.68; p < 0.0001) were associated with an elevated risk of childhood pneumonia; pneumonia was associated with an elevated risk of childhood asthma (1.96, 1.72–2.25; p < 0.0001), allergic rhinitis (1.60, 1.48–1.73; p < 0.0001) and wheezing (2.49, 2.25–2.75; p < 0.0001). Conclusions Pneumonia is prevalent among preschool children in China, and it affects other childhood respiratory diseases. Although the prevalence of pneumonia in Chinese children shows a decreasing trend in 2019 compared to 2011, a well-established management system is still needed to further reduce the prevalence of pneumonia and reduce the burden of disease in children.