sCellST comparison with HoverNet labels: Each row corresponds to a Visium slide from cancer tissue: a, c, e: breast and b, d, f ovarian. a,b. Visium slides used for the experiments. c,d: Top differentially expressed genes when grouping cells by HoverNet labels. e,f: Distribution of known marker genes grouped with HoverNet labels.

sCellST comparison with HoverNet labels: Each row corresponds to a Visium slide from cancer tissue: a, c, e: breast and b, d, f ovarian. a,b. Visium slides used for the experiments. c,d: Top differentially expressed genes when grouping cells by HoverNet labels. e,f: Distribution of known marker genes grouped with HoverNet labels.

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Advancing our understanding of tissue organization and its disruptions in disease remains a key focus in biomedical research. Histological slides stained with Hematoxylin and Eosin (H&E) provide an abundant source of morphological information, while Spatial Transcriptomics (ST) enables detailed, spatially-resolved gene expression (GE) analysis, tho...