The boxplot showed the unigene expression distribution of each sample (A). Venn analysis represents the number of shared and unique unigenes among both samples (B). Gene classification was based on Gene Ontology (GO) (C) and Kyoto Encyclopedia of Genes and Genomes (KEGG) analysis for DEGs (D). The GO term and KEGG pathway names are provided on the vertical axis. The horizontal axis represents the Rich factor (the ratio of the number of unigenes enriched in the GO term and KEGG pathways to the number of annotated genes). The larger the rich factor, the greater the degree of enrichment. The size of the dot represents the number of genes, and the color of the dot corresponds to different false discovery rate (FDR) (Pvaule_corrected) ranges.

Source publication

The phenotypes of cones, scales, damaged seeds, empty seed shells,...

The boxplot showed the unigene expression distribution of each sample...

Metabolomics analysis. Statistical chart of differential metabolite...

Metabolic pathway analysis. Kyoto Encyclopedia of Genes and Genomes...

Measurement of the endogenous content of indole-3-acetic acid (IAA) and...

Unraveling site-specific seed formation abnormalities in Picea neoveitchii Mast. trees via widely metabolomic and transcriptomic analysis

Article

Full-text available

Dec 2024

Picea neoveitchii Mast. is a rare and threatened species of evergreen coniferous tree in China, commonly facing issues such as damaged seeds, abnormal seed growth, and empty seed shells. These abnormalities vary by location; unfortunately, the reasons behind these inconsistencies are completely unknown. This study compared seeds from two 150-year-o...