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Schematic representation of common acid-resistance mechanisms in microorganisms, shown with examples. (A) Gad system; gadA/B encode glutamate decarboxylase GadA/B, which convert Glu to GABA, and GadC (encoded by gadC), which acts as the Glu/GABA antiporter. (B) Biofilm and cell density; comCDE and luxS are involved in a quorum-sensing system that is essential for biofilm formation, and the las system is necessary for the exogenous Pseudomonoas quinolone-signaling molecule to stimulate biofilm formation. (C) F 1 -F 0 -ATPase; as a proton pump, this complex pumps H + out to increase intracellular pH. (D) Protection of macromolecules; RecA and AP endonuclease are involved in DNA repair, DnaK is a protein repair chaperone, and IrrE is a global regulatory protein that can stimulate recA transcription. (E) Alkali production; urea is transformed into NH 3 by urease to neutralize protons. The Adi and Agd systems can also produce NH 3 through several reactions. Glu = glutamate; Adc = arginine decarboxylase; Agd = agmatine deiminase; Ptc = putative putrescine transcarbamylase; Adi = arginine deiminase; Otc = ornithine transcarbamylase; Ck = carbamate kinase. The figure is reprinted from Liu et al. (2015) with permission from Elsevier.

Schematic representation of common acid-resistance mechanisms in microorganisms, shown with examples. (A) Gad system; gadA/B encode glutamate decarboxylase GadA/B, which convert Glu to GABA, and GadC (encoded by gadC), which acts as the Glu/GABA antiporter. (B) Biofilm and cell density; comCDE and luxS are involved in a quorum-sensing system that is essential for biofilm formation, and the las system is necessary for the exogenous Pseudomonoas quinolone-signaling molecule to stimulate biofilm formation. (C) F 1 -F 0 -ATPase; as a proton pump, this complex pumps H + out to increase intracellular pH. (D) Protection of macromolecules; RecA and AP endonuclease are involved in DNA repair, DnaK is a protein repair chaperone, and IrrE is a global regulatory protein that can stimulate recA transcription. (E) Alkali production; urea is transformed into NH 3 by urease to neutralize protons. The Adi and Agd systems can also produce NH 3 through several reactions. Glu = glutamate; Adc = arginine decarboxylase; Agd = agmatine deiminase; Ptc = putative putrescine transcarbamylase; Adi = arginine deiminase; Otc = ornithine transcarbamylase; Ck = carbamate kinase. The figure is reprinted from Liu et al. (2015) with permission from Elsevier.

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The selection of potential probiotic strains that possess the physiological capacity of performing successfully in the gastrointestinal tract (GIT) is a critical challenge. Probiotic microorganisms must tolerate the deleterious effects of various stresses to survive passage and function in the human GIT. Adhesion to the intestinal mucosa is also an...

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... or arginine deiminase activities; Cotter and Hill, 2003;Mira et al., 2010;Wang et al., 2018). Figure 1 illustrates the common mechanisms of the acid tolerances by various bacteria. ...

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