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Analytical sensitivity versus analytical volume for APT compared with other commonly used geoscience characterisation techniques. Figure modified from an original version by Cameca.

Analytical sensitivity versus analytical volume for APT compared with other commonly used geoscience characterisation techniques. Figure modified from an original version by Cameca.

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Atom probe tomography is an analytical technique that provides quantitative three‐dimensional elemental and isotopic analyses at sub‐nanometre resolution across the whole periodic table. Although developed and mostly used in the materials science and semiconductor fields, recent years have seen increasing development and application in the geoscien...

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... geological processes are fundamentally controlled by element interactions at this scale, so the ability to quantify elemental and isotopic compositions with nanometre resolution has the potential to greatly increase our understanding of fundamental geological processes. However, few analytical techniques are capable of providing such resolution (Figure 1). One such technique is atom probe tomography (APT), a timeof-flight mass spectrometry system that characterises atomic species and position with sub-nanometre spatial resolution. ...
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... histogram of the mass-to-charge values (measured in Daltons, Da) is generated as a 'mass spectrum', and the mass values are calibrated from known mass peaks. A typical spectrum collected from a feldspar sample indicates the presence of single and molecular ions at different multiple charge states and further illustrates the ability to distinguish between different isotopes ( Figure 10). The capacity to identify and separate mass peaks is dependent on the mass resolving power (MRP), defined as an inverse measure of the mass peak width (Dm) with respect to the mass-to-charge value (m): ...
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... effects, for example, due to local field distortions at atomic terrace step-edges in crystalline samples, are referred to as trajectory aberrations ( Waugh et al. 1976, Vurpillot et al. 2000b). Larger-scale distortions can occur wherever there are differences in the field strength required to evaporate atoms from local regions on the surface ( Figure 11). These effects, known as 'local magnification', illustrate an important limitation in obtaining an accurate spatial reconstruction. ...
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... of sample selection is initially similar to other microanalysis techniques, with rock samples from wellcharacterised igneous, sedimentary or metamorphic terrains being collected during fieldwork, and progressively smaller regions of interest then being selected and sequentially characterised ( Figure 12). Thin sections or grain mounts are commonly used, though unpolished fracture surfaces or powders can also be utilised. ...
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... addition, ToF-SIMS instruments provide mass-to-charge ratio spectra like those generated by APT, but the different acquisition conditions mean that some m/q peaks are found in different positions. This can help with identification of peaks and highlight potential interferences in the atom probe data (Figure 13). Furthermore, the incorporation of ToF-SIMS systems into focussed ion-beam scanning electron microscopes (FIB-SEM) used for atom probe specimen preparation enables compositional information to be in used for targeting ( Rickard et al. 2020). ...
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... recent years, site-specific sample preparation of both conductive and non-conductive materials has increasingly utilised FIB-SEM ( Waugh et al. 1984, Alexander et al. 1989, Larson et al. 1999), and a number of methods for FIB-based specimen preparation have been developed (e.g., see reviews by , McKenzie et al. 2010, Blum et al. 2016. However, most facilities now use a similar methodology for site-specific atom probe specimens ( Figure 14). This method involves the deposition of a small, rectangular, protective Pt capping layer over the region of interest followed by the removal of a 2.5 µm wide triangular prism, with a length dependent on the number of required APT tips. ...
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... method involves the deposition of a small, rectangular, protective Pt capping layer over the region of interest followed by the removal of a 2.5 µm wide triangular prism, with a length dependent on the number of required APT tips. Segments of the prism (approximately 2 µm wide) are then mounted on pre-sharpened posts on a silicon coupon and ion beam milled with an annular mask to produce a needle shape with a final tip diameter < 100 nm ( Figure 14). The mounting of regions of interest onto 'microtips' on a single coupon simplifies specimen preparation and handling (Thompson et al. 2005), while mounting onto a TEM grid enables correlative microscopy studies (Gorman et al. 2008). ...
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... cases where atom probe acquisition is stopped prior to tip failure, reimaging of the specimen after the analysis, and comparison with images taken before the analysis allow the analysed volume to be precisely measured (Figure 15). This information can be used to establish, or refine, the correct reconstruction parameters for a particular mineral. ...
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... tomography by TEM and STEM (K€ ubel et al. 2005) also provides new opportunities for better reconstruction parameters. Cross-correlating electron tomography results with atom probe analyses has been shown to ensure the better specimen radius, shank angle, and zdirection scaling of atom probe reconstructions ( Arslan et al. 2008, Gorman et al. 2008) (Figure 16). In addition, and in a similar way to the SEM, TEM can be performed after APT analysis on analysed specimens to measure the amount of material that has been removed during the atom probe analysis and determine reconstruction parameters. ...
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... the development of laser-assisted APT, there has been growing interest in applying nanoscale geochemical characterisation to a broad range of geological materials including glass ( Gin et al. 2013, Hellmann et al. 2015, Gin et al. 2017), diamond (Heck et al. 2014, Lewis et al. 2015, Schirhagl et al. 2015, Mukherjee et al. 2016), Fe-Ni metal alloys ( Einsle et al. 2018) and silicides ( Gopon et al. 2017), platinum-group alloys ( Parman et al. 2015, Daly et al. 2017, oxides ( Bachhav et al. 2011, Fahey et al. 2016, Taylor et al. 2018, Frierdich et al. 2019 analyses by SIMS were disturbed at the nanoscale, but the disturbance could be temporally constrained through the characterisation of isotopic ratios in different Pb domains (Valley et al. 2014(Valley et al. , 2015; Figure 18a). A similar study on discrete Pb reservoirs in discordant zircon provided some insights into the mechanisms of Pb segregation and the role of defects in forming discrete Pb isotopic reservoirs (Peterman et al. 2016(Peterman et al. , 2019; Figure 18b). ...
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... the development of laser-assisted APT, there has been growing interest in applying nanoscale geochemical characterisation to a broad range of geological materials including glass ( Gin et al. 2013, Hellmann et al. 2015, Gin et al. 2017), diamond (Heck et al. 2014, Lewis et al. 2015, Schirhagl et al. 2015, Mukherjee et al. 2016), Fe-Ni metal alloys ( Einsle et al. 2018) and silicides ( Gopon et al. 2017), platinum-group alloys ( Parman et al. 2015, Daly et al. 2017, oxides ( Bachhav et al. 2011, Fahey et al. 2016, Taylor et al. 2018, Frierdich et al. 2019 analyses by SIMS were disturbed at the nanoscale, but the disturbance could be temporally constrained through the characterisation of isotopic ratios in different Pb domains (Valley et al. 2014(Valley et al. , 2015; Figure 18a). A similar study on discrete Pb reservoirs in discordant zircon provided some insights into the mechanisms of Pb segregation and the role of defects in forming discrete Pb isotopic reservoirs (Peterman et al. 2016(Peterman et al. , 2019; Figure 18b). Trace element mobility has been studied in undeformed zircon ( Piazolo et al. 2017, Peterman et al. 2019) and deformed zircon ( Piazolo et al. 2016, and similar studies have been undertaken on baddeleyite (White et al. 2017, White et al. 2018a, b), monazite ( Fougerouse et al. 2018, Seydoux-Guillaume et al. 2019), titanite ) and rutile ( Verberne et al. 2019). ...
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... these varying properties also have the potential to affect the ability of specific minerals to be analysed by APT due to difficulties in sample preparation and/or a propensity to rupture in the high electric fields required for field emission. To date, published atom probe data exist for a limited number of minerals ( Figure 17; Table 2) and, in most cases, analysed minerals have tended to have high crystal symmetry and reasonable Mohs' hardness. However, experiments on galena (Pb sulfide) and zinnwaldite (Li-bearing mica) show that APT can also be successfully applied to relatively soft minerals, which in the latter case are also strongly anisotropic, cleaved and has low crystal symmetry (Fig- ure 19). ...
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... date, published atom probe data exist for a limited number of minerals ( Figure 17; Table 2) and, in most cases, analysed minerals have tended to have high crystal symmetry and reasonable Mohs' hardness. However, experiments on galena (Pb sulfide) and zinnwaldite (Li-bearing mica) show that APT can also be successfully applied to relatively soft minerals, which in the latter case are also strongly anisotropic, cleaved and has low crystal symmetry (Fig- ure 19). Despite such success, assessment of the crystallographic orientation dependence on atom probe acquisition parameters and yield may be needed in minerals, such as micas, where there is a high degree of crystallographic anisotropy. ...
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... ( Fougerouse et al. 2016; Figure 21a). In cases such as this, where compositionally distinct inclusions are present, the reconstruction of spatial relationships is critical. ...
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... cases such as this, where compositionally distinct inclusions are present, the reconstruction of spatial relationships is critical. However, these data illustrated potential issues in the reconstruction of such small compositional features because the field required for evaporation differs markedly between the nanoscale inclusion ( Figure 11), in this case gold, and the host arsenopyrite matrix (Figure 21a). Similar features have been seen in atom probe studies of synthetic specimens of spherical gold nanoparticles in MgO (Devaraj et al. 2014). ...
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... cases such as this, where compositionally distinct inclusions are present, the reconstruction of spatial relationships is critical. However, these data illustrated potential issues in the reconstruction of such small compositional features because the field required for evaporation differs markedly between the nanoscale inclusion ( Figure 11), in this case gold, and the host arsenopyrite matrix (Figure 21a). Similar features have been seen in atom probe studies of synthetic specimens of spherical gold nanoparticles in MgO (Devaraj et al. 2014). ...
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... features have been seen in atom probe studies of synthetic specimens of spherical gold nanoparticles in MgO (Devaraj et al. 2014). The alternative scenario of nanoparticles requiring a lower field for evaporation than the host has also been reported for Pb clusters in zircon (Figure 18b; Peterman et al. 2016). Such studies serve to illustrate that care should be taken in interpreting reconstructed inclusion morphologies when the field required for evaporation is markedly different between host and inclusion. ...
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... advantage of APT is its ability to place compositional constraints on the trace element and isotope geochemistry of the included phase. For example, Ca-rich clusters in monazite (Figure 21b), interpreted to represent inclusions of nanoscale apatite ( Fougerouse et al. 2018), also contain trace amounts of Si and Pb which is enriched when compared with the host monazite. The apatite inclusions have been interpreted to segregate shortly after monazite growth and they preferentially partition common Pb within the monazite lattice. ...
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... potential area of future research is in the analysis of nanoscale fluid inclusions within minerals. A likely example is the presence of OH 3 peaks associated with the tips of segregated Fe-rich lamellae in rutile (Figure 21c). In this case, the reconstruction of OH 3 distribution shows an unusual pattern of dispersion that likely represents trajectory aberrations associated with rapid evaporation of the inclusion contents once the inclusion has been breached. ...
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... of these clusters, using 3D volumes defined by isoconcentration surfaces (Hellman et al. 2000) or cluster analysis routines (e.g., Stephenson et al. 2007, Dong et al. 2019, significantly reduces the analytical background and permits quantification of compositional and isotopic analysis of these clusters. 207 Pb/ 206 Pb measurements of clusters in both concordant and discordant zircon (Figure 18) have been shown to be distinct from bulk isotopic compositions outside the cluster and this has allowed the isotopic compositions of the clusters to be used to constrain the timing of geological events ( Valley et al. 2014, Peterman et al. 2016). ...
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... clusters have also been found in other minerals and again the mechanisms of cluster formation are notably different. As outlined earlier, Pb associated with nanoinclusions of apatite in monazite (Figure 21b) have been interpreted to reflect partitioning of Pb into apatite during unmixing of phosphate end-member compositions immediately after growth ( Fougerouse et al. 2018). However, APT and TEM data from high-temperature monazite grains from Rogaland, Norway, contain CaSO 4 nanoclusters that appear to be linked to Pb mobility associated with cluster formation during a younger, high-temperature metamorphic event ( Laurent et al. 2016, Seydoux-Guillaume et al. 2019). ...
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... materials science studies include stable isotopic characterisation of both anions and cations and include C ( Thuvander et al. 2011), O ( Kinno et al. 2014), S ( Gopon et al. 2019), N ( Kinno et al. 2015), Si ( Shimizu et al. 2009), Fe (Taylor et al. 2018, Frierdich et al. 2019), Zn (Ironside et al. 2017) and Ge ( Shimizu et al. 2013). The sensitivity of isotopic analysis at nanometre scales is fundamentally limited by the number of atoms available within a small analytical volume (Figure 1). For spherical volumes around 100 nm in size, which can be accommodated within a typical APT reconstruction, isotopic sensitivities of 1 per mille may be achieved for elements present at 1-5% concentration. ...
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... of atom probe analysis of U isotopes in certified U 3 O 8 reference materials has shown that major isotopic ratios agree with known compositional values (Fahey et al. 2016) and there are comparative thermal ion mass spectrometry (TIMS) and atom probe studies that show that Re-Os analysis by atom probe may yield similar, though less precise, ages to more traditional TIMS analyses (Daly et al. 2018). A number of studies have also investigated the mechanisms that can affect the distribution of radiogenic 207 Pb/ 206 Pb ratios in zircon (Figure 18; Valley et al. 2014, Peterman et al. 2016, Blum et al. 2018), baddeleyite ( White et al. 2017) and monazite ( Fougerouse et al. 2018, Seydoux-Guillaume et al. 2019). The nanoscale distribution of common Pb associated with deformation-related defects has also been studied in titanite ) and pyrite ( Fougerouse et al. 2019). ...
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... a heterogeneous material, the different constituents of the material rarely have the same field evaporation properties. Differences in these properties will induce the preferential evaporation of the low-field constituent relative to the high-field component and create asperities (or topography) at the surface of the specimen (Figure 11). This nanoscale topography will create ion trajectory aberrations in comparison with a smooth surface. ...

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